RNA–Protein interactions for RNA: ENST00000639145.1

SCARB2-215, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 4,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-215ENST00000639145 NDUFAF6Q330K2 333 aa13.07□□□□□ -0.32
SCARB2-215ENST00000639145 PDCD4Q53EL6 469 aaKnown RBP13.07□□□□□ -0.32
SCARB2-215ENST00000639145 OR2T5Q6IEZ7 315 aa13.07□□□□□ -0.32
SCARB2-215ENST00000639145 ZNF551Q7Z340 670 aaPredicted RBP13.07□□□□□ -0.32
SCARB2-215ENST00000639145 C12orf40Q86WS4 652 aa13.07□□□□□ -0.32
SCARB2-215ENST00000639145 OR7G3Q8NG95 312 aa13.07□□□□□ -0.32
SCARB2-215ENST00000639145 OR2T29Q8NH02 315 aa13.07□□□□□ -0.32
SCARB2-215ENST00000639145 TRIB3Q96RU7 358 aa13.07□□□□□ -0.32
SCARB2-215ENST00000639145 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.07□□□□□ -0.32
SCARB2-215ENST00000639145 UBE2ZQ9H832 354 aaPredicted RBP13.07□□□□□ -0.32
SCARB2-215ENST00000639145 ATG2BQ96BY7 2078 aa13.07□□□□□ -0.32
SCARB2-215ENST00000639145 SCO2O43819 266 aa13.07□□□□□ -0.32
SCARB2-215ENST00000639145 ATXN1LP0C7T5 689 aaKnown RBP13.07□□□□□ -0.32
SCARB2-215ENST00000639145 FUT4P22083 530 aa13.07□□□□□ -0.32
SCARB2-215ENST00000639145 CBLP22681 906 aa13.07□□□□□ -0.32
SCARB2-215ENST00000639145 HOXA9P31269 272 aa13.07□□□□□ -0.32
SCARB2-215ENST00000639145 RPA4Q13156 261 aa13.07□□□□□ -0.32
SCARB2-215ENST00000639145 ZSWIM7Q19AV6 140 aa13.07□□□□□ -0.32
SCARB2-215ENST00000639145 REEP3Q6NUK4 255 aa13.07□□□□□ -0.32
SCARB2-215ENST00000639145 ADGRD2Q7Z7M1 963 aa13.07□□□□□ -0.32
SCARB2-215ENST00000639145 KBTBD8Q8NFY9 601 aa13.07□□□□□ -0.32
SCARB2-215ENST00000639145 OR52E4Q8NGH9 312 aa13.07□□□□□ -0.32
SCARB2-215ENST00000639145 WDR60Q8WVS4 1066 aa13.07□□□□□ -0.32
SCARB2-215ENST00000639145 KLHL6Q8WZ60 621 aa13.07□□□□□ -0.32
SCARB2-215ENST00000639145 WBP2Q969T9 261 aa13.07□□□□□ -0.32
SCARB2-215ENST00000639145 HSH2DQ96JZ2 352 aa13.07□□□□□ -0.32
SCARB2-215ENST00000639145 RIMKLBQ9ULI2 386 aa13.07□□□□□ -0.32
SCARB2-215ENST00000639145 ANKRD31Q8N7Z5 1873 aa13.07□□□□□ -0.32
SCARB2-215ENST00000639145 DOCK2Q92608 1830 aa13.06□□□□□ -0.32
SCARB2-215ENST00000639145 HCRTR2O43614 444 aa13.06□□□□□ -0.32
SCARB2-215ENST00000639145 ETS2P15036 469 aa13.06□□□□□ -0.32
SCARB2-215ENST00000639145 OR4D2P58180 307 aa13.06□□□□□ -0.32
SCARB2-215ENST00000639145 XIAPP98170 497 aa13.06□□□□□ -0.32
SCARB2-215ENST00000639145 DUSP6Q16828 381 aa13.06□□□□□ -0.32
SCARB2-215ENST00000639145 RBM44Q6ZP01 1051 aaKnown RBP13.06□□□□□ -0.32
SCARB2-215ENST00000639145 ATCAYQ86WG3 371 aa13.06□□□□□ -0.32
SCARB2-215ENST00000639145 GALNT12Q8IXK2 581 aa13.06□□□□□ -0.32
SCARB2-215ENST00000639145 SVOPLQ8N434 492 aa13.06□□□□□ -0.32
SCARB2-215ENST00000639145 OR5K1Q8NHB7 308 aa13.06□□□□□ -0.32
SCARB2-215ENST00000639145 RNASE11Q8TAA1 199 aaKnown RBP13.06□□□□□ -0.32
SCARB2-215ENST00000639145 ENKURQ8TC29 256 aa13.06□□□□□ -0.32
SCARB2-215ENST00000639145 RHBDF1Q96CC6 855 aa13.06□□□□□ -0.32
SCARB2-215ENST00000639145 LDAHQ9H6V9 325 aa13.06□□□□□ -0.32
SCARB2-215ENST00000639145 MAST2Q6P0Q8 1798 aa13.06□□□□□ -0.32
SCARB2-215ENST00000639145 ZNF726A6NNF4 738 aa13.06□□□□□ -0.32
SCARB2-215ENST00000639145 CAPN14A8MX76 684 aa13.06□□□□□ -0.32
SCARB2-215ENST00000639145 PGRMC2O15173 223 aa13.06□□□□□ -0.32
SCARB2-215ENST00000639145 PRKACGP22612 351 aa13.06□□□□□ -0.32
SCARB2-215ENST00000639145 COMMD6Q7Z4G1 85 aa13.06□□□□□ -0.32
SCARB2-215ENST00000639145 GFM1Q96RP9 751 aaKnown RBP13.06□□□□□ -0.32
SCARB2-215ENST00000639145 ACTL8Q9H568 366 aa13.06□□□□□ -0.32
SCARB2-215ENST00000639145 ZBTB20Q9HC78 741 aaPredicted RBP13.06□□□□□ -0.32
SCARB2-215ENST00000639145 TREX1Q9NSU2 369 aa13.06□□□□□ -0.32
SCARB2-215ENST00000639145 STMN3Q9NZ72 180 aa13.06□□□□□ -0.32
SCARB2-215ENST00000639145 NENFQ9UMX5 172 aa13.06□□□□□ -0.32
SCARB2-215ENST00000639145 COL11A2P13942 1736 aaPredicted RBP13.06□□□□□ -0.32
SCARB2-215ENST00000639145 MAGEB3O15480 346 aa13.06□□□□□ -0.32
SCARB2-215ENST00000639145 KCNJ5P48544 419 aa13.06□□□□□ -0.32
SCARB2-215ENST00000639145 TRAP1Q12931 704 aaKnown RBP13.06□□□□□ -0.32
SCARB2-215ENST00000639145 MLF2Q15773 248 aaPredicted RBP13.06□□□□□ -0.32
SCARB2-215ENST00000639145 FLYWCH1Q4VC44 716 aa13.06□□□□□ -0.32
SCARB2-215ENST00000639145 LETMD1Q6P1Q0 360 aa13.06□□□□□ -0.32
SCARB2-215ENST00000639145 TMEM107Q6UX40 140 aa13.06□□□□□ -0.32
SCARB2-215ENST00000639145 SLC30A8Q8IWU4 369 aa13.06□□□□□ -0.32
SCARB2-215ENST00000639145 NUP43Q8NFH3 380 aa13.06□□□□□ -0.32
SCARB2-215ENST00000639145 BIRC7Q96CA5 298 aa13.06□□□□□ -0.32
SCARB2-215ENST00000639145 ZFYVE21Q9BQ24 234 aa13.06□□□□□ -0.32
SCARB2-215ENST00000639145 SEC61A2Q9H9S3 476 aa13.06□□□□□ -0.32
SCARB2-215ENST00000639145 FARSBQ9NSD9 589 aaKnown RBP13.06□□□□□ -0.32
SCARB2-215ENST00000639145 IGSF5Q9NSI5 407 aa13.06□□□□□ -0.32
SCARB2-215ENST00000639145 CENPMQ9NSP4 180 aa13.06□□□□□ -0.32
SCARB2-215ENST00000639145 RHBDL2Q9NX52 303 aa13.06□□□□□ -0.32
SCARB2-215ENST00000639145 DAPK2Q9UIK4 370 aa13.06□□□□□ -0.32
SCARB2-215ENST00000639145 TCRBV5S1A1TA0A578 114 aa13.05□□□□□ -0.32
SCARB2-215ENST00000639145 BLOC1S5-TXNDC5H3BN57 136 aa13.05□□□□□ -0.32
SCARB2-215ENST00000639145 HSD3B1P14060 373 aa13.05□□□□□ -0.32
SCARB2-215ENST00000639145 RPS3P23396 243 aaKnown RBP eCLIP13.05□□□□□ -0.321e-6■■■■■ 29.8
SCARB2-215ENST00000639145 HSD3B2P26439 372 aa13.05□□□□□ -0.32
SCARB2-215ENST00000639145 POU6F2P78424 691 aaPredicted RBP13.05□□□□□ -0.32
SCARB2-215ENST00000639145 SLC5A9Q2M3M2 681 aa13.05□□□□□ -0.32
SCARB2-215ENST00000639145 ZC3H14Q6PJT7 736 aaKnown RBP13.05□□□□□ -0.32
SCARB2-215ENST00000639145 RASGEF1AQ8N9B8 481 aa13.05□□□□□ -0.32
SCARB2-215ENST00000639145 RFKQ969G6 155 aa13.05□□□□□ -0.32
SCARB2-215ENST00000639145 NEIL2Q969S2 332 aa13.05□□□□□ -0.32
SCARB2-215ENST00000639145 TMBIM1Q969X1 311 aa13.05□□□□□ -0.32
SCARB2-215ENST00000639145 RBM7Q9Y580 266 aaKnown RBP13.05□□□□□ -0.32
SCARB2-215ENST00000639145 PPP6CO00743 305 aa13.05□□□□□ -0.32
SCARB2-215ENST00000639145 KCNJ13O60928 360 aa13.05□□□□□ -0.32
SCARB2-215ENST00000639145 SOX14O95416 240 aa13.05□□□□□ -0.32
SCARB2-215ENST00000639145 CYBRD1Q53TN4 286 aa13.05□□□□□ -0.32
SCARB2-215ENST00000639145 SHISA6Q6ZSJ9 500 aa13.05□□□□□ -0.32
SCARB2-215ENST00000639145 OR5P2Q8WZ92 322 aa13.05□□□□□ -0.32
SCARB2-215ENST00000639145 DAZLQ92904 295 aaKnown RBP13.05□□□□□ -0.32
SCARB2-215ENST00000639145 FBXL8Q96CD0 374 aa13.05□□□□□ -0.32
SCARB2-215ENST00000639145 MCHR1Q99705 422 aa13.05□□□□□ -0.32
SCARB2-215ENST00000639145 C8orf4Q9NR00 106 aa13.05□□□□□ -0.32
SCARB2-215ENST00000639145 STARD5Q9NSY2 213 aa13.05□□□□□ -0.32
SCARB2-215ENST00000639145 TMEM184CQ9NVA4 438 aa13.05□□□□□ -0.32
SCARB2-215ENST00000639145 ACTR3BQ9P1U1 418 aa13.05□□□□□ -0.32
SCARB2-215ENST00000639145 C1orf226A1L170 272 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms