RNA–Protein interactions for RNA: ENST00000638959.1

LMBR1-222, Transcript of limb development membrane protein 1, humanhuman

TSL 5 BASIC

Gene LMBR1, Length 93 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-222ENST00000638959 J3QRE1 110 aa-0.27□□□□□ -2.45
LMBR1-222ENST00000638959 AP3D1O14617 1153 aa-0.27□□□□□ -2.45
LMBR1-222ENST00000638959 RIPK2O43353 540 aa-0.27□□□□□ -2.45
LMBR1-222ENST00000638959 HS6ST1O60243 411 aa-0.27□□□□□ -2.45
LMBR1-222ENST00000638959 F9P00740 461 aa-0.27□□□□□ -2.45
LMBR1-222ENST00000638959 SBK2P0C263 348 aa-0.27□□□□□ -2.45
LMBR1-222ENST00000638959 LAMP1P11279 417 aa-0.27□□□□□ -2.45
LMBR1-222ENST00000638959 ADRA2CP18825 462 aa-0.27□□□□□ -2.45
LMBR1-222ENST00000638959 ZP3P21754 424 aa-0.27□□□□□ -2.45
LMBR1-222ENST00000638959 CHKAP35790 457 aa-0.27□□□□□ -2.45
LMBR1-222ENST00000638959 PPM1FP49593 454 aaPredicted RBP-0.27□□□□□ -2.45
LMBR1-222ENST00000638959 PRB3Q04118 309 aaPredicted RBP-0.27□□□□□ -2.45
LMBR1-222ENST00000638959 IKQ13123 557 aaPredicted RBP-0.27□□□□□ -2.45
LMBR1-222ENST00000638959 MADCAM1Q13477 382 aa-0.27□□□□□ -2.45
LMBR1-222ENST00000638959 ZNF528Q3MIS6 628 aa-0.27□□□□□ -2.45
LMBR1-222ENST00000638959 DNLZQ5SXM8 178 aa-0.27□□□□□ -2.45
LMBR1-222ENST00000638959 TTC19Q6DKK2 380 aaPredicted RBP-0.27□□□□□ -2.45
LMBR1-222ENST00000638959 Q6ZVQ6 151 aa-0.27□□□□□ -2.45
LMBR1-222ENST00000638959 NUP54Q7Z3B4 507 aa-0.27□□□□□ -2.45
LMBR1-222ENST00000638959 CCDC71Q8IV32 467 aaPredicted RBP-0.27□□□□□ -2.45
LMBR1-222ENST00000638959 C6orf223Q8N319 242 aa-0.27□□□□□ -2.45
LMBR1-222ENST00000638959 FRMD1Q8N878 549 aa-0.27□□□□□ -2.45
LMBR1-222ENST00000638959 SAMD12Q8N8I0 201 aa-0.27□□□□□ -2.45
LMBR1-222ENST00000638959 Q8N9W7 124 aa-0.27□□□□□ -2.45
LMBR1-222ENST00000638959 ROBO4Q8WZ75 1007 aa-0.27□□□□□ -2.45
LMBR1-222ENST00000638959 SMARCD2Q92925 531 aa-0.27□□□□□ -2.45
LMBR1-222ENST00000638959 NXPE2Q96DL1 559 aa-0.27□□□□□ -2.45
LMBR1-222ENST00000638959 LURAP1Q96LR2 239 aa-0.27□□□□□ -2.45
LMBR1-222ENST00000638959 NEK1Q96PY6 1258 aa-0.27□□□□□ -2.45
LMBR1-222ENST00000638959 NCAPGQ9BPX3 1015 aa-0.27□□□□□ -2.45
LMBR1-222ENST00000638959 LZTS2Q9BRK4 669 aa-0.27□□□□□ -2.45
LMBR1-222ENST00000638959 C19orf24Q9BVV8 132 aa-0.27□□□□□ -2.45
LMBR1-222ENST00000638959 PRRG4Q9BZD6 226 aa-0.27□□□□□ -2.45
LMBR1-222ENST00000638959 SPNS1Q9H2V7 528 aa-0.27□□□□□ -2.45
LMBR1-222ENST00000638959 SH3GLB2Q9NR46 395 aa-0.27□□□□□ -2.45
LMBR1-222ENST00000638959 PRMT7Q9NVM4 692 aaPredicted RBP-0.27□□□□□ -2.45
LMBR1-222ENST00000638959 LRRK1Q38SD2 2015 aa-0.28□□□□□ -2.45
LMBR1-222ENST00000638959 SHROOM3Q8TF72 1996 aa-0.28□□□□□ -2.45
LMBR1-222ENST00000638959 PARD3Q8TEW0 1356 aa-0.28□□□□□ -2.45
LMBR1-222ENST00000638959 COL27A1Q8IZC6 1860 aaPredicted RBP-0.28□□□□□ -2.45
LMBR1-222ENST00000638959 MMP1P03956 469 aa-0.28□□□□□ -2.45
LMBR1-222ENST00000638959 SPARCP09486 303 aa-0.28□□□□□ -2.45
LMBR1-222ENST00000638959 HSD17B1P14061 328 aa-0.28□□□□□ -2.45
LMBR1-222ENST00000638959 LGALS3P17931 250 aaKnown RBP-0.28□□□□□ -2.45
LMBR1-222ENST00000638959 EPHA8P29322 1005 aaPredicted RBP-0.28□□□□□ -2.45
LMBR1-222ENST00000638959 IL2RGP31785 369 aa-0.28□□□□□ -2.45
LMBR1-222ENST00000638959 HSPA4P34932 840 aa-0.28□□□□□ -2.45
LMBR1-222ENST00000638959 CAMPP49913 170 aa-0.28□□□□□ -2.45
LMBR1-222ENST00000638959 ACTA2P62736 377 aa-0.28□□□□□ -2.45
LMBR1-222ENST00000638959 ACTC1P68032 377 aa-0.28□□□□□ -2.45
LMBR1-222ENST00000638959 RBBP4Q09028 425 aa-0.28□□□□□ -2.45
LMBR1-222ENST00000638959 BIRC3Q13489 604 aa-0.28□□□□□ -2.45
LMBR1-222ENST00000638959 SERTAD2Q14140 314 aa-0.28□□□□□ -2.45
LMBR1-222ENST00000638959 C1orf228Q6PIY5 440 aa-0.28□□□□□ -2.45
LMBR1-222ENST00000638959 CLEC17AQ6ZS10 378 aa-0.28□□□□□ -2.45
LMBR1-222ENST00000638959 FBXO39Q8N4B4 442 aa-0.28□□□□□ -2.45
LMBR1-222ENST00000638959 ARL14Q8N4G2 192 aa-0.28□□□□□ -2.45
LMBR1-222ENST00000638959 RASGEF1AQ8N9B8 481 aa-0.28□□□□□ -2.45
LMBR1-222ENST00000638959 BBS1Q8NFJ9 593 aa-0.28□□□□□ -2.45
LMBR1-222ENST00000638959 TSACCQ96A04 125 aaPredicted RBP-0.28□□□□□ -2.45
LMBR1-222ENST00000638959 SPRR2GQ9BYE4 73 aa-0.28□□□□□ -2.45
LMBR1-222ENST00000638959 Q9H8V8 135 aa-0.28□□□□□ -2.45
LMBR1-222ENST00000638959 RIC8AQ9NPQ8 531 aa-0.28□□□□□ -2.45
LMBR1-222ENST00000638959 MIEF1Q9NQG6 463 aa-0.28□□□□□ -2.45
LMBR1-222ENST00000638959 ITM2CQ9NQX7 267 aa-0.28□□□□□ -2.45
LMBR1-222ENST00000638959 CORO1CQ9ULV4 474 aaPredicted RBP-0.28□□□□□ -2.45
LMBR1-222ENST00000638959 LTBP4Q8N2S1 1624 aa-0.28□□□□□ -2.45
LMBR1-222ENST00000638959 RUSC2Q8N2Y8 1516 aa-0.28□□□□□ -2.45
LMBR1-222ENST00000638959 A0A096LNJ9 63 aa-0.29□□□□□ -2.46
LMBR1-222ENST00000638959 TRAV40A0A0B4J280 105 aa-0.29□□□□□ -2.46
LMBR1-222ENST00000638959 IQANK1A0A1B0GTG1 560 aa-0.29□□□□□ -2.46
LMBR1-222ENST00000638959 A0A1W2PR77 199 aa-0.29□□□□□ -2.46
LMBR1-222ENST00000638959 TMEM221A6NGB7 291 aa-0.29□□□□□ -2.46
LMBR1-222ENST00000638959 C16orf90A8MZG2 172 aa-0.29□□□□□ -2.46
LMBR1-222ENST00000638959 B4DLN1 442 aa-0.29□□□□□ -2.46
LMBR1-222ENST00000638959 NUDT21O43809 227 aaKnown RBP-0.29□□□□□ -2.46
LMBR1-222ENST00000638959 TPPPO94811 219 aa-0.29□□□□□ -2.46
LMBR1-222ENST00000638959 RETP07949 1114 aa-0.29□□□□□ -2.46
LMBR1-222ENST00000638959 P0C880 135 aa-0.29□□□□□ -2.46
LMBR1-222ENST00000638959 SERPINB3P29508 390 aa-0.29□□□□□ -2.46
LMBR1-222ENST00000638959 ACSL1P33121 698 aa-0.29□□□□□ -2.46
LMBR1-222ENST00000638959 XCR1P46094 333 aa-0.29□□□□□ -2.46
LMBR1-222ENST00000638959 ZNF75DP51815 510 aa-0.29□□□□□ -2.46
LMBR1-222ENST00000638959 ARL4CP56559 192 aa-0.29□□□□□ -2.46
LMBR1-222ENST00000638959 TIMM10P62072 90 aa-0.29□□□□□ -2.46
LMBR1-222ENST00000638959 RASGEF1BQ0VAM2 473 aa-0.29□□□□□ -2.46
LMBR1-222ENST00000638959 VEZF1Q14119 521 aa-0.29□□□□□ -2.46
LMBR1-222ENST00000638959 BAK1Q16611 211 aa-0.29□□□□□ -2.46
LMBR1-222ENST00000638959 PRSS8Q16651 343 aa-0.29□□□□□ -2.46
LMBR1-222ENST00000638959 MICAQ29983 383 aa-0.29□□□□□ -2.46
LMBR1-222ENST00000638959 HYIQ5T013 277 aa-0.29□□□□□ -2.46
LMBR1-222ENST00000638959 RAET1LQ5VY80 246 aa-0.29□□□□□ -2.46
LMBR1-222ENST00000638959 ADAMTSL5Q6ZMM2 481 aa-0.29□□□□□ -2.46
LMBR1-222ENST00000638959 IL17RELQ6ZVW7 336 aa-0.29□□□□□ -2.46
LMBR1-222ENST00000638959 NOL8Q76FK4 1167 aaKnown RBP-0.29□□□□□ -2.46
LMBR1-222ENST00000638959 NEGR1Q7Z3B1 354 aa-0.29□□□□□ -2.46
LMBR1-222ENST00000638959 TMEM173Q86WV6 379 aaPredicted RBP-0.29□□□□□ -2.46
LMBR1-222ENST00000638959 CPOQ8IVL8 374 aa-0.29□□□□□ -2.46
LMBR1-222ENST00000638959 MCEMP1Q8IX19 187 aa-0.29□□□□□ -2.46
LMBR1-222ENST00000638959 GPR65Q8IYL9 337 aa-0.29□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms