RNA–Protein interactions for RNA: ENST00000638794.1

SMN2-216, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-216ENST00000638794 WISP3O95389 354 aaPredicted RBP15.72■□□□□ 0.11
SMN2-216ENST00000638794 TBX6O95947 436 aaPredicted RBP15.72■□□□□ 0.11
SMN2-216ENST00000638794 HSD17B7P56937 341 aa15.72■□□□□ 0.11
SMN2-216ENST00000638794 RAB38P57729 211 aa15.72■□□□□ 0.11
SMN2-216ENST00000638794 CAPN12Q6ZSI9 719 aa15.72■□□□□ 0.11
SMN2-216ENST00000638794 SULF2Q8IWU5 870 aa15.72■□□□□ 0.11
SMN2-216ENST00000638794 ZBED8Q8IZ13 594 aa15.72■□□□□ 0.11
SMN2-216ENST00000638794 CYP4Z2PQ8N1L4 340 aa15.72■□□□□ 0.11
SMN2-216ENST00000638794 SPATA6LQ8N4H0 392 aa15.72■□□□□ 0.11
SMN2-216ENST00000638794 TMEM156Q8N614 296 aa15.72■□□□□ 0.11
SMN2-216ENST00000638794 PHF10Q8WUB8 498 aaKnown RBP15.72■□□□□ 0.11
SMN2-216ENST00000638794 NCLNQ969V3 563 aa15.72■□□□□ 0.11
SMN2-216ENST00000638794 VMP1Q96GC9 406 aa15.72■□□□□ 0.11
SMN2-216ENST00000638794 LURAP1Q96LR2 239 aa15.72■□□□□ 0.11
SMN2-216ENST00000638794 TMEM79Q9BSE2 394 aa15.72■□□□□ 0.11
SMN2-216ENST00000638794 DERL2Q9GZP9 239 aa15.72■□□□□ 0.11
SMN2-216ENST00000638794 SMYD2Q9NRG4 433 aa15.72■□□□□ 0.11
SMN2-216ENST00000638794 NSMCE4AQ9NXX6 385 aa15.72■□□□□ 0.11
SMN2-216ENST00000638794 PPIEQ9UNP9 301 aaKnown RBP15.72■□□□□ 0.11
SMN2-216ENST00000638794 CCDC168Q8NDH2 2452 aa15.71■□□□□ 0.11
SMN2-216ENST00000638794 EFCAB8A8MWE9 144 aa15.71■□□□□ 0.11
SMN2-216ENST00000638794 E9PLN8 166 aa15.71■□□□□ 0.11
SMN2-216ENST00000638794 KLRC4-KLRK1H3BQV0 150 aa15.71■□□□□ 0.11
SMN2-216ENST00000638794 TAPBPO15533 448 aa15.71■□□□□ 0.11
SMN2-216ENST00000638794 B3GALT2O43825 422 aa15.71■□□□□ 0.11
SMN2-216ENST00000638794 CLEC3AO75596 197 aa15.71■□□□□ 0.11
SMN2-216ENST00000638794 GSTM2P28161 218 aa15.71■□□□□ 0.11
SMN2-216ENST00000638794 RPL21P46778 160 aaKnown RBP15.71■□□□□ 0.11
SMN2-216ENST00000638794 GPR143P51810 404 aa15.71■□□□□ 0.11
SMN2-216ENST00000638794 PLA2G16P53816 162 aa15.71■□□□□ 0.11
SMN2-216ENST00000638794 SLC13A2Q13183 592 aa15.71■□□□□ 0.11
SMN2-216ENST00000638794 FBXO48Q5FWF7 155 aa15.71■□□□□ 0.11
SMN2-216ENST00000638794 ADNP2Q6IQ32 1131 aa15.71■□□□□ 0.11
SMN2-216ENST00000638794 MDGA2Q7Z553 956 aa15.71■□□□□ 0.11
SMN2-216ENST00000638794 VN1R5Q7Z5H4 357 aa15.71■□□□□ 0.11
SMN2-216ENST00000638794 ZNF295-AS1Q8N0V1 137 aa15.71■□□□□ 0.11
SMN2-216ENST00000638794 KRT78Q8N1N4 520 aa15.71■□□□□ 0.11
SMN2-216ENST00000638794 FAM47BQ8NA70 645 aa15.71■□□□□ 0.11
SMN2-216ENST00000638794 OR2L5Q8NG80 312 aa15.71■□□□□ 0.11
SMN2-216ENST00000638794 SEC16BQ96JE7 1060 aa15.71■□□□□ 0.11
SMN2-216ENST00000638794 QRFPRQ96P65 431 aa15.71■□□□□ 0.11
SMN2-216ENST00000638794 DMRTA2Q96SC8 542 aa15.71■□□□□ 0.11
SMN2-216ENST00000638794 VKORC1Q9BQB6 163 aa15.71■□□□□ 0.11
SMN2-216ENST00000638794 REXO4Q9GZR2 422 aaKnown RBP15.71■□□□□ 0.11
SMN2-216ENST00000638794 NT5DC2Q9H857 520 aa15.71■□□□□ 0.11
SMN2-216ENST00000638794 CAB39LQ9H9S4 337 aa15.71■□□□□ 0.11
SMN2-216ENST00000638794 GPRC5BQ9NZH0 403 aa15.71■□□□□ 0.11
SMN2-216ENST00000638794 MTO1Q9Y2Z2 717 aaKnown RBP15.71■□□□□ 0.11
SMN2-216ENST00000638794 SNX24Q9Y343 169 aa15.71■□□□□ 0.11
SMN2-216ENST00000638794 ZNF407Q9C0G0 2248 aa15.71■□□□□ 0.1
SMN2-216ENST00000638794 A0A088AWK7 358 aa15.7■□□□□ 0.1
SMN2-216ENST00000638794 CCDC188H7C350 402 aa15.7■□□□□ 0.1
SMN2-216ENST00000638794 CLDN4O14493 209 aa15.7■□□□□ 0.1
SMN2-216ENST00000638794 PEX1O43933 1283 aa15.7■□□□□ 0.1
SMN2-216ENST00000638794 HS6ST1O60243 411 aa15.7■□□□□ 0.1
SMN2-216ENST00000638794 PRKNO60260 465 aaPredicted RBP15.7■□□□□ 0.1
SMN2-216ENST00000638794 PRAMEF4O60810 478 aa15.7■□□□□ 0.1
SMN2-216ENST00000638794 POU3F2P20265 443 aaPredicted RBP15.7■□□□□ 0.1
SMN2-216ENST00000638794 ZNF10P21506 573 aaPredicted RBP15.7■□□□□ 0.1
SMN2-216ENST00000638794 CERS1P27544 350 aa15.7■□□□□ 0.1
SMN2-216ENST00000638794 KIR3DL1P43629 444 aa15.7■□□□□ 0.1
SMN2-216ENST00000638794 SLC12A2P55011 1212 aa15.7■□□□□ 0.1
SMN2-216ENST00000638794 GPR85P60893 370 aa15.7■□□□□ 0.1
SMN2-216ENST00000638794 GNG11P61952 73 aa15.7■□□□□ 0.1
SMN2-216ENST00000638794 POU4F1Q01851 419 aa15.7■□□□□ 0.1
SMN2-216ENST00000638794 ADPRMQ3LIE5 342 aa15.7■□□□□ 0.1
SMN2-216ENST00000638794 PRAMEF9Q5VWM5 478 aa15.7■□□□□ 0.1
SMN2-216ENST00000638794 TRIM40Q6P9F5 258 aa15.7■□□□□ 0.1
SMN2-216ENST00000638794 C16orf47Q6ZP98 133 aaPredicted RBP15.7■□□□□ 0.1
SMN2-216ENST00000638794 CLNKQ7Z7G1 428 aa15.7■□□□□ 0.1
SMN2-216ENST00000638794 TCAIMQ8N3R3 496 aa15.7■□□□□ 0.1
SMN2-216ENST00000638794 ZFP62Q8NB50 900 aaPredicted RBP15.7■□□□□ 0.1
SMN2-216ENST00000638794 ESAMQ96AP7 390 aa15.7■□□□□ 0.1
SMN2-216ENST00000638794 CSF3RQ99062 836 aa15.7■□□□□ 0.1
SMN2-216ENST00000638794 CCDC77Q9BR77 488 aa15.7■□□□□ 0.1
SMN2-216ENST00000638794 CAPS2Q9BXY5 557 aa15.7■□□□□ 0.1
SMN2-216ENST00000638794 PITHD1Q9GZP4 211 aaPredicted RBP15.7■□□□□ 0.1
SMN2-216ENST00000638794 EHD1Q9H4M9 534 aa15.7■□□□□ 0.1
SMN2-216ENST00000638794 ADAP2Q9NPF8 381 aa15.7■□□□□ 0.1
SMN2-216ENST00000638794 DNAJC11Q9NVH1 559 aa15.7■□□□□ 0.1
SMN2-216ENST00000638794 WWOXQ9NZC7 414 aa15.7■□□□□ 0.1
SMN2-216ENST00000638794 PPT2Q9UMR5 302 aa15.7■□□□□ 0.1
SMN2-216ENST00000638794 MRPS33Q9Y291 106 aaKnown RBP15.7■□□□□ 0.1
SMN2-216ENST00000638794 SAR1BQ9Y6B6 198 aa15.7■□□□□ 0.1
SMN2-216ENST00000638794 F8P00451 2351 aa15.7■□□□□ 0.1
SMN2-216ENST00000638794 EML6Q6ZMW3 1958 aa15.69■□□□□ 0.1
SMN2-216ENST00000638794 A0A1B0GTH9 108 aa15.69■□□□□ 0.1
SMN2-216ENST00000638794 ANKDD1BA6NHY2 528 aa15.69■□□□□ 0.1
SMN2-216ENST00000638794 TMEM200CA6NKL6 621 aa15.69■□□□□ 0.1
SMN2-216ENST00000638794 CXorf49A8MYA2 514 aaPredicted RBP15.69■□□□□ 0.1
SMN2-216ENST00000638794 CYR61O00622 381 aa15.69■□□□□ 0.1
SMN2-216ENST00000638794 PHGDHO43175 533 aaKnown RBP15.69■□□□□ 0.1
SMN2-216ENST00000638794 CDC40O60508 579 aaKnown RBP eCLIP15.69■□□□□ 0.1
SMN2-216ENST00000638794 CCDC166P0CW27 439 aa15.69■□□□□ 0.1
SMN2-216ENST00000638794 TFEBP19484 476 aa15.69■□□□□ 0.1
SMN2-216ENST00000638794 PTGS2P35354 604 aa15.69■□□□□ 0.1
SMN2-216ENST00000638794 GGT5P36269 586 aa15.69■□□□□ 0.1
SMN2-216ENST00000638794 HSPA7P48741 367 aa15.69■□□□□ 0.1
SMN2-216ENST00000638794 SSR4P51571 173 aa15.69■□□□□ 0.1
SMN2-216ENST00000638794 LIM2P55344 173 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms