RNA–Protein interactions for RNA: ENST00000638009.1

CACNA1A-257, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,665 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-257ENST00000638009 AKAP12Q02952 1782 aa18.73■□□□□ 0.59
CACNA1A-257ENST00000638009 SHOX2O60902 331 aaPredicted RBP18.73■□□□□ 0.59
CACNA1A-257ENST00000638009 PTTG1O95997 202 aa18.73■□□□□ 0.59
CACNA1A-257ENST00000638009 DLDP09622 509 aaKnown RBP18.73■□□□□ 0.59
CACNA1A-257ENST00000638009 CASP6P55212 293 aa18.73■□□□□ 0.59
CACNA1A-257ENST00000638009 MRPS10P82664 201 aaKnown RBP18.73■□□□□ 0.59
CACNA1A-257ENST00000638009 SP2Q02086 613 aa18.73■□□□□ 0.59
CACNA1A-257ENST00000638009 GANABQ14697 944 aaKnown RBP18.73■□□□□ 0.59
CACNA1A-257ENST00000638009 METTL4Q8N3J2 472 aa18.73■□□□□ 0.59
CACNA1A-257ENST00000638009 PLD4Q96BZ4 506 aa18.73■□□□□ 0.59
CACNA1A-257ENST00000638009 P2RY11Q96G91 374 aa18.73■□□□□ 0.59
CACNA1A-257ENST00000638009 TSPAN10Q9H1Z9 355 aaPredicted RBP18.73■□□□□ 0.59
CACNA1A-257ENST00000638009 LGALS13Q9UHV8 139 aa18.73■□□□□ 0.59
CACNA1A-257ENST00000638009 GJE1A6NN92 205 aa18.73■□□□□ 0.59
CACNA1A-257ENST00000638009 CDC7O00311 574 aa18.73■□□□□ 0.59
CACNA1A-257ENST00000638009 SERPINA7P05543 415 aa18.73■□□□□ 0.59
CACNA1A-257ENST00000638009 TRIM23P36406 574 aa18.73■□□□□ 0.59
CACNA1A-257ENST00000638009 NDST2P52849 883 aa18.73■□□□□ 0.59
CACNA1A-257ENST00000638009 GSTM4Q03013 218 aa18.73■□□□□ 0.59
CACNA1A-257ENST00000638009 PLA2G4EQ3MJ16 856 aa18.73■□□□□ 0.59
CACNA1A-257ENST00000638009 PPP1R26Q5T8A7 1209 aaPredicted RBP18.73■□□□□ 0.59
CACNA1A-257ENST00000638009 NPNTQ6UXI9 565 aa18.73■□□□□ 0.59
CACNA1A-257ENST00000638009 NLGN2Q8NFZ4 835 aa18.73■□□□□ 0.59
CACNA1A-257ENST00000638009 DKKL1Q9UK85 242 aa18.73■□□□□ 0.59
CACNA1A-257ENST00000638009 ROBO3Q96MS0 1386 aa18.73■□□□□ 0.59
CACNA1A-257ENST00000638009 H0YAE9 185 aa18.73■□□□□ 0.59
CACNA1A-257ENST00000638009 CAMK2DQ13557 499 aa18.73■□□□□ 0.59
CACNA1A-257ENST00000638009 MOB1AQ9H8S9 216 aa18.73■□□□□ 0.59
CACNA1A-257ENST00000638009 LCKP06239 509 aa18.73■□□□□ 0.59
CACNA1A-257ENST00000638009 MRPS6P82932 125 aaKnown RBP18.73■□□□□ 0.59
CACNA1A-257ENST00000638009 KCNC4Q03721 635 aa18.73■□□□□ 0.59
CACNA1A-257ENST00000638009 NTRK3Q16288 839 aa18.73■□□□□ 0.59
CACNA1A-257ENST00000638009 NWD1Q149M9 1564 aa18.73■□□□□ 0.59
CACNA1A-257ENST00000638009 RAB11BQ15907 218 aa18.73■□□□□ 0.59
CACNA1A-257ENST00000638009 OTOP1Q7RTM1 612 aa18.73■□□□□ 0.59
CACNA1A-257ENST00000638009 HS3ST5Q8IZT8 346 aa18.73■□□□□ 0.59
CACNA1A-257ENST00000638009 OR2T33Q8NG76 320 aa18.73■□□□□ 0.59
CACNA1A-257ENST00000638009 OR5H2Q8NGV7 314 aa18.73■□□□□ 0.59
CACNA1A-257ENST00000638009 MGAT4BQ9UQ53 548 aa18.73■□□□□ 0.59
CACNA1A-257ENST00000638009 COL1A2P08123 1366 aa18.73■□□□□ 0.59
CACNA1A-257ENST00000638009 NPIPA2E9PIF3 369 aa18.72■□□□□ 0.59
CACNA1A-257ENST00000638009 NPIPA3F8WFD2 350 aa18.72■□□□□ 0.59
CACNA1A-257ENST00000638009 TRAPPC6AO75865 159 aa18.72■□□□□ 0.59
CACNA1A-257ENST00000638009 SMAD3P84022 425 aaKnown RBP18.72■□□□□ 0.59
CACNA1A-257ENST00000638009 TNFAIP8L2Q6P589 184 aaPredicted RBP18.72■□□□□ 0.59
CACNA1A-257ENST00000638009 PYROXD2Q8N2H3 581 aa18.72■□□□□ 0.59
CACNA1A-257ENST00000638009 TULP4Q9NRJ4 1543 aa18.72■□□□□ 0.59
CACNA1A-257ENST00000638009 ZNF182P17025 639 aaPredicted RBP18.72■□□□□ 0.59
CACNA1A-257ENST00000638009 NOMO2Q5JPE7 1267 aa18.72■□□□□ 0.59
CACNA1A-257ENST00000638009 TRIM46Q7Z4K8 759 aa18.72■□□□□ 0.59
CACNA1A-257ENST00000638009 PRELID2Q8N945 189 aa18.72■□□□□ 0.59
CACNA1A-257ENST00000638009 KCT2Q8NC54 265 aa18.72■□□□□ 0.59
CACNA1A-257ENST00000638009 NANPQ8TBE9 248 aa18.72■□□□□ 0.59
CACNA1A-257ENST00000638009 IRGQQ8WZA9 623 aa18.72■□□□□ 0.59
CACNA1A-257ENST00000638009 BARD1Q99728 777 aaKnown RBP18.72■□□□□ 0.59
CACNA1A-257ENST00000638009 A8MVM7 634 aa18.72■□□□□ 0.59
CACNA1A-257ENST00000638009 IDH3AP50213 366 aa18.72■□□□□ 0.59
CACNA1A-257ENST00000638009 GPR68Q15743 365 aa18.72■□□□□ 0.59
CACNA1A-257ENST00000638009 DLC1Q96QB1 1528 aa18.72■□□□□ 0.59
CACNA1A-257ENST00000638009 ZGRF1Q86YA3 2104 aa18.72■□□□□ 0.59
CACNA1A-257ENST00000638009 K7EPI3 171 aa18.72■□□□□ 0.59
CACNA1A-257ENST00000638009 ZSCAN5DPP0CG00 497 aa18.72■□□□□ 0.59
CACNA1A-257ENST00000638009 BPIP17213 487 aa18.72■□□□□ 0.59
CACNA1A-257ENST00000638009 DSC3Q14574 896 aa18.72■□□□□ 0.59
CACNA1A-257ENST00000638009 OR8K3Q8NH51 312 aa18.72■□□□□ 0.59
CACNA1A-257ENST00000638009 OR56A3Q8NH54 315 aa18.72■□□□□ 0.59
CACNA1A-257ENST00000638009 GPR21Q99679 349 aa18.72■□□□□ 0.59
CACNA1A-257ENST00000638009 BEST1O76090 585 aa18.72■□□□□ 0.59
CACNA1A-257ENST00000638009 MAGEB1P43366 347 aa18.72■□□□□ 0.59
CACNA1A-257ENST00000638009 RTL6Q6ICC9 239 aa18.72■□□□□ 0.59
CACNA1A-257ENST00000638009 RIOX1Q9H6W3 641 aa18.72■□□□□ 0.59
CACNA1A-257ENST00000638009 OSER1Q9NX31 292 aa18.72■□□□□ 0.59
CACNA1A-257ENST00000638009 QPCTLQ9NXS2 382 aa18.72■□□□□ 0.59
CACNA1A-257ENST00000638009 B3GLCTQ6Y288 498 aa18.72■□□□□ 0.59
CACNA1A-257ENST00000638009 UBXN10Q96LJ8 280 aa18.72■□□□□ 0.59
CACNA1A-257ENST00000638009 OR2S2Q9NQN1 319 aa18.72■□□□□ 0.59
CACNA1A-257ENST00000638009 LUZP4Q9P127 313 aa18.72■□□□□ 0.59
CACNA1A-257ENST00000638009 CXCL11O14625 94 aa18.72■□□□□ 0.59
CACNA1A-257ENST00000638009 AKR1C4P17516 323 aa18.72■□□□□ 0.59
CACNA1A-257ENST00000638009 TRAM2Q15035 370 aa18.72■□□□□ 0.59
CACNA1A-257ENST00000638009 TMEM31Q5JXX7 168 aa18.72■□□□□ 0.59
CACNA1A-257ENST00000638009 ACTRT3Q9BYD9 372 aa18.72■□□□□ 0.59
CACNA1A-257ENST00000638009 HMX1Q9NP08 348 aaPredicted RBP18.72■□□□□ 0.59
CACNA1A-257ENST00000638009 MROH2AA6NES4 1674 aa18.71■□□□□ 0.59
CACNA1A-257ENST00000638009 PORP16435 677 aaPredicted RBP18.71■□□□□ 0.59
CACNA1A-257ENST00000638009 UGT8Q16880 541 aa18.71■□□□□ 0.59
CACNA1A-257ENST00000638009 CEACAM20Q6UY09 585 aa18.71■□□□□ 0.59
CACNA1A-257ENST00000638009 DRAXINQ8NBI3 349 aaPredicted RBP18.71■□□□□ 0.59
CACNA1A-257ENST00000638009 ACTL8Q9H568 366 aa18.71■□□□□ 0.59
CACNA1A-257ENST00000638009 ARFGEF3Q5TH69 2177 aa18.71■□□□□ 0.59
CACNA1A-257ENST00000638009 A0A087WUU8 490 aa18.71■□□□□ 0.59
CACNA1A-257ENST00000638009 ARP10275 920 aa18.71■□□□□ 0.59
CACNA1A-257ENST00000638009 SLC2A7Q6PXP3 512 aa18.71■□□□□ 0.59
CACNA1A-257ENST00000638009 CMC1Q7Z7K0 106 aa18.71■□□□□ 0.59
CACNA1A-257ENST00000638009 HAS2Q92819 552 aa18.71■□□□□ 0.59
CACNA1A-257ENST00000638009 ADAM19Q9H013 955 aa18.71■□□□□ 0.59
CACNA1A-257ENST00000638009 C1orf21Q9H246 121 aa18.71■□□□□ 0.59
CACNA1A-257ENST00000638009 A0A1W2PRB8 838 aa18.71■□□□□ 0.59
CACNA1A-257ENST00000638009 OC90Q02509 493 aaPredicted RBP18.71■□□□□ 0.59
CACNA1A-257ENST00000638009 FSTL4Q6MZW2 842 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms