RNA–Protein interactions for RNA: ENST00000637774.1

CACNA1A-248, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,381 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-248ENST00000637774 SPATS1Q496A3 300 aa9.24□□□□□ -0.93
CACNA1A-248ENST00000637774 PRRT3Q5FWE3 981 aa9.24□□□□□ -0.93
CACNA1A-248ENST00000637774 CWF19L1Q69YN2 538 aaKnown RBP9.24□□□□□ -0.93
CACNA1A-248ENST00000637774 LCTLQ6UWM7 567 aa9.24□□□□□ -0.93
CACNA1A-248ENST00000637774 Q6ZS52 159 aa9.24□□□□□ -0.93
CACNA1A-248ENST00000637774 THAP5Q7Z6K1 395 aa9.24□□□□□ -0.93
CACNA1A-248ENST00000637774 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.24□□□□□ -0.93
CACNA1A-248ENST00000637774 OR4N5Q8IXE1 308 aa9.24□□□□□ -0.93
CACNA1A-248ENST00000637774 FAM160A2Q8N612 972 aaPredicted RBP9.24□□□□□ -0.93
CACNA1A-248ENST00000637774 METTL25Q8N6Q8 603 aa9.24□□□□□ -0.93
CACNA1A-248ENST00000637774 OR5K1Q8NHB7 308 aa9.24□□□□□ -0.93
CACNA1A-248ENST00000637774 DNAJB8Q8NHS0 232 aa9.24□□□□□ -0.93
CACNA1A-248ENST00000637774 GTPBP3Q969Y2 492 aaKnown RBP9.24□□□□□ -0.93
CACNA1A-248ENST00000637774 QRFPRQ96P65 431 aa9.24□□□□□ -0.93
CACNA1A-248ENST00000637774 SLX1AQ9BQ83 275 aa9.24□□□□□ -0.93
CACNA1A-248ENST00000637774 ANKRD60Q9BZ19 345 aa9.24□□□□□ -0.93
CACNA1A-248ENST00000637774 KLHL31Q9H511 634 aa9.24□□□□□ -0.93
CACNA1A-248ENST00000637774 SCHIP1Q9P0W5 487 aaPredicted RBP9.24□□□□□ -0.93
CACNA1A-248ENST00000637774 IFT80Q9P2H3 777 aaPredicted RBP9.24□□□□□ -0.93
CACNA1A-248ENST00000637774 KLHL3Q9UH77 587 aa9.24□□□□□ -0.93
CACNA1A-248ENST00000637774 CNOT11Q9UKZ1 510 aaKnown RBP9.24□□□□□ -0.93
CACNA1A-248ENST00000637774 CKAP5Q14008 2032 aa9.24□□□□□ -0.93
CACNA1A-248ENST00000637774 VCANP13611 3396 aa9.24□□□□□ -0.93
CACNA1A-248ENST00000637774 GRXCR2A6NFK2 248 aa9.24□□□□□ -0.93
CACNA1A-248ENST00000637774 KRT75O95678 551 aa9.24□□□□□ -0.93
CACNA1A-248ENST00000637774 SMIM18P0DKX4 95 aa9.24□□□□□ -0.93
CACNA1A-248ENST00000637774 PVRP15151 417 aa9.24□□□□□ -0.93
CACNA1A-248ENST00000637774 NDUFV2P19404 249 aa9.24□□□□□ -0.93
CACNA1A-248ENST00000637774 PTNP21246 168 aa9.24□□□□□ -0.93
CACNA1A-248ENST00000637774 MAOBP27338 520 aa9.24□□□□□ -0.93
CACNA1A-248ENST00000637774 PIGAP37287 484 aa9.24□□□□□ -0.93
CACNA1A-248ENST00000637774 EIF2DP41214 584 aaKnown RBP9.24□□□□□ -0.93
CACNA1A-248ENST00000637774 LSM3P62310 102 aaKnown RBP9.24□□□□□ -0.93
CACNA1A-248ENST00000637774 OLR1P78380 273 aa9.24□□□□□ -0.93
CACNA1A-248ENST00000637774 SLAMF1Q13291 335 aa9.24□□□□□ -0.93
CACNA1A-248ENST00000637774 LASP1Q14847 261 aaKnown RBP9.24□□□□□ -0.93
CACNA1A-248ENST00000637774 MLF2Q15773 248 aaPredicted RBP9.24□□□□□ -0.93
CACNA1A-248ENST00000637774 LRIF1Q5T3J3 769 aa9.24□□□□□ -0.93
CACNA1A-248ENST00000637774 MFSD4BQ5TF39 518 aa9.24□□□□□ -0.93
CACNA1A-248ENST00000637774 TMEM92Q6UXU6 159 aa9.24□□□□□ -0.93
CACNA1A-248ENST00000637774 WDR53Q7Z5U6 358 aaPredicted RBP9.24□□□□□ -0.93
CACNA1A-248ENST00000637774 CARM1Q86X55 608 aa9.24□□□□□ -0.93
CACNA1A-248ENST00000637774 P3H2Q8IVL5 708 aa9.24□□□□□ -0.93
CACNA1A-248ENST00000637774 ZZZ3Q8IYH5 903 aa9.24□□□□□ -0.93
CACNA1A-248ENST00000637774 TMEFF1Q8IYR6 380 aa9.24□□□□□ -0.93
CACNA1A-248ENST00000637774 ZCCHC7Q8N3Z6 543 aaKnown RBP9.24□□□□□ -0.93
CACNA1A-248ENST00000637774 FAM46DQ8NEK8 389 aa9.24□□□□□ -0.93
CACNA1A-248ENST00000637774 CNIH3Q8TBE1 160 aa9.24□□□□□ -0.93
CACNA1A-248ENST00000637774 COX14Q96I36 57 aa9.24□□□□□ -0.93
CACNA1A-248ENST00000637774 THUMPD1Q9NXG2 353 aaKnown RBP9.24□□□□□ -0.93
CACNA1A-248ENST00000637774 ASIC5Q9NY37 505 aa9.24□□□□□ -0.93
CACNA1A-248ENST00000637774 SLC13A4Q9UKG4 626 aa9.24□□□□□ -0.93
CACNA1A-248ENST00000637774 CA14Q9ULX7 337 aa9.24□□□□□ -0.93
CACNA1A-248ENST00000637774 ENTPD4Q9Y227 616 aa9.24□□□□□ -0.93
CACNA1A-248ENST00000637774 TDRD6O60522 2096 aaKnown RBP9.24□□□□□ -0.93
CACNA1A-248ENST00000637774 SPTBN5Q9NRC6 3674 aaKnown RBP9.24□□□□□ -0.93
CACNA1A-248ENST00000637774 MTCL1Q9Y4B5 1905 aaKnown RBP9.23□□□□□ -0.93
CACNA1A-248ENST00000637774 TNFRSF11BO00300 401 aa9.23□□□□□ -0.93
CACNA1A-248ENST00000637774 BCKDKO14874 412 aa9.23□□□□□ -0.93
CACNA1A-248ENST00000637774 FESP07332 822 aa9.23□□□□□ -0.93
CACNA1A-248ENST00000637774 FURINP09958 794 aa9.23□□□□□ -0.93
CACNA1A-248ENST00000637774 CMPK1P30085 196 aa9.23□□□□□ -0.93
CACNA1A-248ENST00000637774 RPL3P39023 403 aaKnown RBP9.23□□□□□ -0.93
CACNA1A-248ENST00000637774 RNF144AP50876 292 aaPredicted RBP9.23□□□□□ -0.93
CACNA1A-248ENST00000637774 PRDX1Q06830 199 aaKnown RBP9.23□□□□□ -0.93
CACNA1A-248ENST00000637774 SLC9A5Q14940 896 aa9.23□□□□□ -0.93
CACNA1A-248ENST00000637774 RPE65Q16518 533 aa9.23□□□□□ -0.93
CACNA1A-248ENST00000637774 TOR1AIP1Q5JTV8 583 aa9.23□□□□□ -0.93
CACNA1A-248ENST00000637774 KCTD8Q6ZWB6 473 aa9.23□□□□□ -0.93
CACNA1A-248ENST00000637774 CEP68Q76N32 757 aa9.23□□□□□ -0.93
CACNA1A-248ENST00000637774 PATL1Q86TB9 770 aaKnown RBP9.23□□□□□ -0.93
CACNA1A-248ENST00000637774 SFTPA2Q8IWL1 248 aa9.23□□□□□ -0.93
CACNA1A-248ENST00000637774 RBM12BQ8IXT5 1001 aaKnown RBP9.23□□□□□ -0.93
CACNA1A-248ENST00000637774 METTL4Q8N3J2 472 aa9.23□□□□□ -0.93
CACNA1A-248ENST00000637774 FBXL6Q8N531 539 aa9.23□□□□□ -0.93
CACNA1A-248ENST00000637774 PACRGLQ8N7B6 248 aa9.23□□□□□ -0.93
CACNA1A-248ENST00000637774 OR5D16Q8NGK9 328 aa9.23□□□□□ -0.93
CACNA1A-248ENST00000637774 LINC00615Q96LM1 132 aaPredicted RBP9.23□□□□□ -0.93
CACNA1A-248ENST00000637774 KCNC2Q96PR1 638 aa9.23□□□□□ -0.93
CACNA1A-248ENST00000637774 ROGDIQ9GZN7 287 aa9.23□□□□□ -0.93
CACNA1A-248ENST00000637774 PCBD2Q9H0N5 130 aa9.23□□□□□ -0.93
CACNA1A-248ENST00000637774 TRPV4Q9HBA0 871 aa9.23□□□□□ -0.93
CACNA1A-248ENST00000637774 TMEM45AQ9NWC5 275 aa9.23□□□□□ -0.93
CACNA1A-248ENST00000637774 LTBP2Q14767 1821 aa9.23□□□□□ -0.93
CACNA1A-248ENST00000637774 hCG_2014768A0A024R1R8 64 aa9.23□□□□□ -0.93
CACNA1A-248ENST00000637774 SMIM31A0A1B0GVY4 71 aa9.23□□□□□ -0.93
CACNA1A-248ENST00000637774 TPD52L2O43399 206 aaKnown RBP9.23□□□□□ -0.93
CACNA1A-248ENST00000637774 PRAMEF10O60809 474 aa9.23□□□□□ -0.93
CACNA1A-248ENST00000637774 EML2O95834 649 aa9.23□□□□□ -0.93
CACNA1A-248ENST00000637774 RETP07949 1114 aa9.23□□□□□ -0.93
CACNA1A-248ENST00000637774 AGXTP21549 392 aa9.23□□□□□ -0.93
CACNA1A-248ENST00000637774 PPIBP23284 216 aaKnown RBP9.23□□□□□ -0.93
CACNA1A-248ENST00000637774 SHMT2P34897 504 aa9.23□□□□□ -0.93
CACNA1A-248ENST00000637774 TPMTP51580 245 aa9.23□□□□□ -0.93
CACNA1A-248ENST00000637774 CSNK1G2P78368 415 aa9.23□□□□□ -0.93
CACNA1A-248ENST00000637774 TXNL4AP83876 142 aaKnown RBP9.23□□□□□ -0.93
CACNA1A-248ENST00000637774 SLC36A3Q495N2 470 aa9.23□□□□□ -0.93
CACNA1A-248ENST00000637774 DEFB134Q4QY38 66 aa9.23□□□□□ -0.93
CACNA1A-248ENST00000637774 GPAT3Q53EU6 434 aa9.23□□□□□ -0.93
CACNA1A-248ENST00000637774 NDUFAF5Q5TEU4 345 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms