RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 SORBS1Q9BX66 1292 aaKnown RBP14.59□□□□□ -0.07
CLN6-219ENST00000637329 RASSF4Q9H2L5 321 aa14.59□□□□□ -0.07
CLN6-219ENST00000637329 MUC13Q9H3R2 512 aa14.59□□□□□ -0.07
CLN6-219ENST00000637329 KLHL31Q9H511 634 aa14.59□□□□□ -0.07
CLN6-219ENST00000637329 DENND2DQ9H6A0 471 aaPredicted RBP14.59□□□□□ -0.07
CLN6-219ENST00000637329 PRDM9Q9NQV7 894 aa14.59□□□□□ -0.07
CLN6-219ENST00000637329 PRDM7Q9NQW5 492 aa14.59□□□□□ -0.07
CLN6-219ENST00000637329 SEMA5BQ9P283 1151 aa14.59□□□□□ -0.07
CLN6-219ENST00000637329 RAB23Q9ULC3 237 aa14.59□□□□□ -0.07
CLN6-219ENST00000637329 EXO1Q9UQ84 846 aaKnown RBP14.59□□□□□ -0.07
CLN6-219ENST00000637329 NEUROG3Q9Y4Z2 214 aa14.59□□□□□ -0.07
CLN6-219ENST00000637329 PCDHA9Q9Y5H5 950 aa14.59□□□□□ -0.07
CLN6-219ENST00000637329 CHD8Q9HCK8 2581 aa14.59□□□□□ -0.07
CLN6-219ENST00000637329 PRSS51A0A1B0GVH4 220 aa14.58□□□□□ -0.08
CLN6-219ENST00000637329 PATE3B3GLJ2 98 aa14.58□□□□□ -0.08
CLN6-219ENST00000637329 H0YGG7 62 aa14.58□□□□□ -0.08
CLN6-219ENST00000637329 NME4O00746 187 aa14.58□□□□□ -0.08
CLN6-219ENST00000637329 RFXANKO14593 260 aa14.58□□□□□ -0.08
CLN6-219ENST00000637329 TOX3O15405 576 aaPredicted RBP14.58□□□□□ -0.08
CLN6-219ENST00000637329 P2RX6O15547 441 aa14.58□□□□□ -0.08
CLN6-219ENST00000637329 MAP3K7O43318 606 aa14.58□□□□□ -0.08
CLN6-219ENST00000637329 TMPRSS11DO60235 418 aa14.58□□□□□ -0.08
CLN6-219ENST00000637329 SCN2BO60939 215 aa14.58□□□□□ -0.08
CLN6-219ENST00000637329 ZBTB11O95625 1053 aaPredicted RBP14.58□□□□□ -0.08
CLN6-219ENST00000637329 GBAP04062 536 aa14.58□□□□□ -0.08
CLN6-219ENST00000637329 FAM58BPP0C7Q3 252 aa14.58□□□□□ -0.08
CLN6-219ENST00000637329 ZCCHC18P0CG32 403 aa14.58□□□□□ -0.08
CLN6-219ENST00000637329 SMIM10L1P0DMW3 83 aa14.58□□□□□ -0.08
CLN6-219ENST00000637329 ALDH4A1P30038 563 aa14.58□□□□□ -0.08
CLN6-219ENST00000637329 WNT3P56703 355 aa14.58□□□□□ -0.08
CLN6-219ENST00000637329 EEFSECP57772 596 aaKnown RBP14.58□□□□□ -0.08
CLN6-219ENST00000637329 ACTR3P61158 418 aa14.58□□□□□ -0.08
CLN6-219ENST00000637329 ARF3P61204 181 aaPredicted RBP14.58□□□□□ -0.08
CLN6-219ENST00000637329 PHC1P78364 1004 aa14.58□□□□□ -0.08
CLN6-219ENST00000637329 BNIP2Q12982 314 aa14.58□□□□□ -0.08
CLN6-219ENST00000637329 SQSTM1Q13501 440 aa14.58□□□□□ -0.08
CLN6-219ENST00000637329 COL9A2Q14055 689 aaPredicted RBP14.58□□□□□ -0.08
CLN6-219ENST00000637329 CAPRIN1Q14444 709 aaKnown RBP14.58□□□□□ -0.08
CLN6-219ENST00000637329 FRMPD2BQ6IN97 320 aa14.58□□□□□ -0.08
CLN6-219ENST00000637329 TMEM214Q6NUQ4 689 aaKnown RBP14.58□□□□□ -0.08
CLN6-219ENST00000637329 KMT5CQ86Y97 462 aa14.58□□□□□ -0.08
CLN6-219ENST00000637329 GATAD2AQ86YP4 633 aa14.58□□□□□ -0.08
CLN6-219ENST00000637329 HPS6Q86YV9 775 aa14.58□□□□□ -0.08
CLN6-219ENST00000637329 SLC15A3Q8IY34 581 aa14.58□□□□□ -0.08
CLN6-219ENST00000637329 CSNK1A1LQ8N752 337 aa14.58□□□□□ -0.08
CLN6-219ENST00000637329 ACOT4Q8N9L9 421 aa14.58□□□□□ -0.08
CLN6-219ENST00000637329 UTP15Q8TED0 518 aaKnown RBP14.58□□□□□ -0.08
CLN6-219ENST00000637329 CCDC74AQ96AQ1 378 aa14.58□□□□□ -0.08
CLN6-219ENST00000637329 TM4SF18Q96CE8 201 aa14.58□□□□□ -0.08
CLN6-219ENST00000637329 CCDC124Q96CT7 223 aaKnown RBP14.58□□□□□ -0.08
CLN6-219ENST00000637329 SMIM10Q96HG1 83 aa14.58□□□□□ -0.08
CLN6-219ENST00000637329 ZNF285Q96NJ3 590 aa14.58□□□□□ -0.08
CLN6-219ENST00000637329 TGM7Q96PF1 710 aa14.58□□□□□ -0.08
CLN6-219ENST00000637329 SERINC2Q96SA4 455 aa14.58□□□□□ -0.08
CLN6-219ENST00000637329 MAP3K3Q99759 626 aa14.58□□□□□ -0.08
CLN6-219ENST00000637329 DPYSL5Q9BPU6 564 aa14.58□□□□□ -0.08
CLN6-219ENST00000637329 SLC39A3Q9BRY0 314 aa14.58□□□□□ -0.08
CLN6-219ENST00000637329 PAIP1Q9H074 479 aaKnown RBP14.58□□□□□ -0.08
CLN6-219ENST00000637329 ZMYND15Q9H091 742 aa14.58□□□□□ -0.08
CLN6-219ENST00000637329 KLHL25Q9H0H3 589 aa14.58□□□□□ -0.08
CLN6-219ENST00000637329 IL1RL2Q9HB29 575 aa14.58□□□□□ -0.08
CLN6-219ENST00000637329 IL21RQ9HBE5 538 aa14.58□□□□□ -0.08
CLN6-219ENST00000637329 ENAMQ9NRM1 1142 aa14.58□□□□□ -0.08
CLN6-219ENST00000637329 CD300AQ9UGN4 299 aa14.58□□□□□ -0.08
CLN6-219ENST00000637329 PHF11Q9UIL8 331 aa14.58□□□□□ -0.08
CLN6-219ENST00000637329 POMPQ9Y244 141 aa14.58□□□□□ -0.08
CLN6-219ENST00000637329 L3MBTL1Q9Y468 752 aa14.58□□□□□ -0.08
CLN6-219ENST00000637329 PCDHGB2Q9Y5G2 931 aa14.58□□□□□ -0.08
CLN6-219ENST00000637329 GMEB1Q9Y692 573 aa14.58□□□□□ -0.08
CLN6-219ENST00000637329 SLC22A7Q9Y694 548 aa14.58□□□□□ -0.08
CLN6-219ENST00000637329 ZFHX4Q86UP3 3567 aa14.58□□□□□ -0.08
CLN6-219ENST00000637329 LY6G6EA0A0G2JKS1 128 aa14.57□□□□□ -0.08
CLN6-219ENST00000637329 PRORSD1PA6NEY8 169 aa14.57□□□□□ -0.08
CLN6-219ENST00000637329 SLC9B1P1A6NJY1 282 aa14.57□□□□□ -0.08
CLN6-219ENST00000637329 MSL3P1P0C860 447 aa14.57□□□□□ -0.08
CLN6-219ENST00000637329 ZNF888P0CJ79 500 aaPredicted RBP14.57□□□□□ -0.08
CLN6-219ENST00000637329 LAMP1P11279 417 aa14.57□□□□□ -0.08
CLN6-219ENST00000637329 PTPN6P29350 595 aa14.57□□□□□ -0.08
CLN6-219ENST00000637329 PPM1FP49593 454 aaPredicted RBP14.57□□□□□ -0.08
CLN6-219ENST00000637329 GFERP55789 205 aa14.57□□□□□ -0.08
CLN6-219ENST00000637329 OR1D5P58170 312 aa14.57□□□□□ -0.08
CLN6-219ENST00000637329 SKP1P63208 163 aa14.57□□□□□ -0.08
CLN6-219ENST00000637329 TRAP1Q12931 704 aaKnown RBP14.57□□□□□ -0.08
CLN6-219ENST00000637329 KPNB1Q14974 876 aaKnown RBP14.57□□□□□ -0.08
CLN6-219ENST00000637329 CLPPQ16740 277 aaPredicted RBP14.57□□□□□ -0.08
CLN6-219ENST00000637329 LAIR1Q6GTX8 287 aa14.57□□□□□ -0.08
CLN6-219ENST00000637329 NANOGP8Q6NSW7 305 aa14.57□□□□□ -0.08
CLN6-219ENST00000637329 RIPOR1Q6ZS17 1223 aa14.57□□□□□ -0.08
CLN6-219ENST00000637329 FAM92BQ6ZTR7 304 aa14.57□□□□□ -0.08
CLN6-219ENST00000637329 C10orf67Q8IYJ2 551 aa14.57□□□□□ -0.08
CLN6-219ENST00000637329 DNAJC22Q8N4W6 341 aa14.57□□□□□ -0.08
CLN6-219ENST00000637329 KCT2Q8NC54 265 aa14.57□□□□□ -0.08
CLN6-219ENST00000637329 OR8K5Q8NH50 307 aa14.57□□□□□ -0.08
CLN6-219ENST00000637329 NUDT8Q8WV74 236 aa14.57□□□□□ -0.08
CLN6-219ENST00000637329 NCSTNQ92542 709 aa14.57□□□□□ -0.08
CLN6-219ENST00000637329 ANKRD27Q96NW4 1050 aa14.57□□□□□ -0.08
CLN6-219ENST00000637329 GBP5Q96PP8 586 aa14.57□□□□□ -0.08
CLN6-219ENST00000637329 NANOGQ9H9S0 305 aa14.57□□□□□ -0.08
CLN6-219ENST00000637329 PDE7BQ9NP56 450 aa14.57□□□□□ -0.08
CLN6-219ENST00000637329 FSCN3Q9NQT6 498 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms