RNA–Protein interactions for RNA: ENST00000636843.1

CTSD-208, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,512 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-208ENST00000636843 BCORP1Q8N888 145 aa11.96□□□□□ -0.49
CTSD-208ENST00000636843 RBM15BQ8NDT2 890 aaKnown RBP11.96□□□□□ -0.49
CTSD-208ENST00000636843 AGAP11Q8TF27 550 aa11.96□□□□□ -0.49
CTSD-208ENST00000636843 ZFYVE21Q9BQ24 234 aa11.96□□□□□ -0.49
CTSD-208ENST00000636843 UNKQ9C0B0 810 aaKnown RBP11.96□□□□□ -0.49
CTSD-208ENST00000636843 DERL2Q9GZP9 239 aa11.96□□□□□ -0.49
CTSD-208ENST00000636843 ALG9Q9H6U8 611 aa11.96□□□□□ -0.49
CTSD-208ENST00000636843 C3orf18Q9UK00 162 aa11.96□□□□□ -0.49
CTSD-208ENST00000636843 TMCO1Q9UM00 188 aa11.96□□□□□ -0.49
CTSD-208ENST00000636843 CDC14AQ9UNH5 594 aa11.96□□□□□ -0.49
CTSD-208ENST00000636843 OSGIN2Q9Y236 505 aa11.96□□□□□ -0.49
CTSD-208ENST00000636843 NUP210LQ5VU65 1888 aa11.96□□□□□ -0.49
CTSD-208ENST00000636843 CELSR2Q9HCU4 2923 aa11.96□□□□□ -0.49
CTSD-208ENST00000636843 IGLV3-12A0A075B6K2 115 aa11.96□□□□□ -0.5
CTSD-208ENST00000636843 A0A0J9YVX5 310 aa11.96□□□□□ -0.5
CTSD-208ENST00000636843 A0A1W2PPV9 198 aa11.96□□□□□ -0.5
CTSD-208ENST00000636843 OR2A25A4D2G3 310 aa11.96□□□□□ -0.5
CTSD-208ENST00000636843 H3BMM5 538 aa11.96□□□□□ -0.5
CTSD-208ENST00000636843 PCDH17O14917 1159 aa11.96□□□□□ -0.5
CTSD-208ENST00000636843 ZBTB14O43829 449 aa11.96□□□□□ -0.5
CTSD-208ENST00000636843 KLHL18O94889 574 aa11.96□□□□□ -0.5
CTSD-208ENST00000636843 EIF2S1P05198 315 aaKnown RBP11.96□□□□□ -0.5
CTSD-208ENST00000636843 STSP08842 583 aa11.96□□□□□ -0.5
CTSD-208ENST00000636843 FBLP22087 321 aaKnown RBP11.96□□□□□ -0.5
CTSD-208ENST00000636843 CMPK1P30085 196 aa11.96□□□□□ -0.5
CTSD-208ENST00000636843 FMO4P31512 558 aa11.96□□□□□ -0.5
CTSD-208ENST00000636843 CPA2P48052 419 aa11.96□□□□□ -0.5
CTSD-208ENST00000636843 PRTGQ2VWP7 1150 aa11.96□□□□□ -0.5
CTSD-208ENST00000636843 LSM12Q3MHD2 195 aaKnown RBP11.96□□□□□ -0.5
CTSD-208ENST00000636843 CCSMST1Q4G0I0 132 aa11.96□□□□□ -0.5
CTSD-208ENST00000636843 SH2D4BQ5SQS7 431 aa11.96□□□□□ -0.5
CTSD-208ENST00000636843 ZNF678Q5SXM1 525 aa11.96□□□□□ -0.5
CTSD-208ENST00000636843 C6orf163Q5TEZ5 329 aa11.96□□□□□ -0.5
CTSD-208ENST00000636843 UGT3A1Q6NUS8 523 aa11.96□□□□□ -0.5
CTSD-208ENST00000636843 LINC00696Q6ZRV3 163 aa11.96□□□□□ -0.5
CTSD-208ENST00000636843 DTWD1Q8N5C7 304 aa11.96□□□□□ -0.5
CTSD-208ENST00000636843 CPSF7Q8N684 471 aaKnown RBP11.96□□□□□ -0.5
CTSD-208ENST00000636843 STAG3L4Q8TBR4 150 aa11.96□□□□□ -0.5
CTSD-208ENST00000636843 AGR3Q8TD06 166 aa11.96□□□□□ -0.5
CTSD-208ENST00000636843 KIAA1191Q96A73 305 aa11.96□□□□□ -0.5
CTSD-208ENST00000636843 MVB12AQ96EY5 273 aa11.96□□□□□ -0.5
CTSD-208ENST00000636843 MAELQ96JY0 434 aaKnown RBP11.96□□□□□ -0.5
CTSD-208ENST00000636843 OR52B2Q96RD2 323 aa11.96□□□□□ -0.5
CTSD-208ENST00000636843 SLX1AQ9BQ83 275 aa11.96□□□□□ -0.5
CTSD-208ENST00000636843 NUF2Q9BZD4 464 aa11.96□□□□□ -0.5
CTSD-208ENST00000636843 RNPEPL1Q9HAU8 725 aa11.96□□□□□ -0.5
CTSD-208ENST00000636843 ZNF160Q9HCG1 818 aa11.96□□□□□ -0.5
CTSD-208ENST00000636843 CRYBG3Q68DQ2 2970 aa11.95□□□□□ -0.5
CTSD-208ENST00000636843 A0A1B0GUH1 482 aa11.95□□□□□ -0.5
CTSD-208ENST00000636843 A0A1W2PQ72 361 aa11.95□□□□□ -0.5
CTSD-208ENST00000636843 DYTNA2CJ06 578 aa11.95□□□□□ -0.5
CTSD-208ENST00000636843 SYCE1LA8MT33 242 aa11.95□□□□□ -0.5
CTSD-208ENST00000636843 E9PBE3 544 aa11.95□□□□□ -0.5
CTSD-208ENST00000636843 KERAO60938 352 aa11.95□□□□□ -0.5
CTSD-208ENST00000636843 MED26O95402 600 aa11.95□□□□□ -0.5
CTSD-208ENST00000636843 MATN4O95460 622 aa11.95□□□□□ -0.5
CTSD-208ENST00000636843 ESR1P03372 595 aa11.95□□□□□ -0.5
CTSD-208ENST00000636843 HERVK_113P63132 956 aa11.95□□□□□ -0.5
CTSD-208ENST00000636843 KLF10Q13118 480 aa11.95□□□□□ -0.5
CTSD-208ENST00000636843 GBX1Q14549 363 aa11.95□□□□□ -0.5
CTSD-208ENST00000636843 ZRSR2Q15696 482 aaKnown RBP11.95□□□□□ -0.5
CTSD-208ENST00000636843 C1QL3Q5VWW1 255 aa11.95□□□□□ -0.5
CTSD-208ENST00000636843 FBXO42Q6P3S6 717 aa11.95□□□□□ -0.5
CTSD-208ENST00000636843 NDUFAF7Q7L592 441 aa11.95□□□□□ -0.5
CTSD-208ENST00000636843 SCUBE1Q8IWY4 988 aa11.95□□□□□ -0.5
CTSD-208ENST00000636843 PRSS58Q8IYP2 241 aa11.95□□□□□ -0.5
CTSD-208ENST00000636843 OR1N1Q8NGS0 311 aa11.95□□□□□ -0.5
CTSD-208ENST00000636843 OR9A1PQ8NGU1 263 aa11.95□□□□□ -0.5
CTSD-208ENST00000636843 PHF21BQ96EK2 531 aa11.95□□□□□ -0.5
CTSD-208ENST00000636843 MOCOSQ96EN8 888 aa11.95□□□□□ -0.5
CTSD-208ENST00000636843 C10orf90Q96M02 699 aa11.95□□□□□ -0.5
CTSD-208ENST00000636843 BIRC8Q96P09 236 aa11.95□□□□□ -0.5
CTSD-208ENST00000636843 ATOH8Q96SQ7 321 aa11.95□□□□□ -0.5
CTSD-208ENST00000636843 DPH7Q9BTV6 452 aa11.95□□□□□ -0.5
CTSD-208ENST00000636843 ERVK-6Q9BXR3 956 aa11.95□□□□□ -0.5
CTSD-208ENST00000636843 GSTO2Q9H4Y5 243 aa11.95□□□□□ -0.5
CTSD-208ENST00000636843 DENND2DQ9H6A0 471 aaPredicted RBP11.95□□□□□ -0.5
CTSD-208ENST00000636843 TRMT6Q9UJA5 497 aaKnown RBP11.95□□□□□ -0.5
CTSD-208ENST00000636843 SVILO95425 2214 aa11.94□□□□□ -0.5
CTSD-208ENST00000636843 NSG1A0A0A6YYJ2 146 aa11.94□□□□□ -0.5
CTSD-208ENST00000636843 H0YGG7 62 aa11.94□□□□□ -0.5
CTSD-208ENST00000636843 HNRNPRO43390 633 aaKnown RBP11.94□□□□□ -0.5
CTSD-208ENST00000636843 PEX11AO75192 247 aa11.94□□□□□ -0.5
CTSD-208ENST00000636843 CIB2O75838 187 aa11.94□□□□□ -0.5
CTSD-208ENST00000636843 PRR35P0CG20 571 aa11.94□□□□□ -0.5
CTSD-208ENST00000636843 ERGP11308 486 aa11.94□□□□□ -0.5
CTSD-208ENST00000636843 COX4I1P13073 169 aa11.94□□□□□ -0.5
CTSD-208ENST00000636843 CXCR2P25025 360 aa11.94□□□□□ -0.5
CTSD-208ENST00000636843 SOX11P35716 441 aa11.94□□□□□ -0.5
CTSD-208ENST00000636843 EMP2P54851 167 aa11.94□□□□□ -0.5
CTSD-208ENST00000636843 ARF3P61204 181 aaPredicted RBP11.94□□□□□ -0.5
CTSD-208ENST00000636843 DSG2Q14126 1118 aa11.94□□□□□ -0.5
CTSD-208ENST00000636843 FASTKQ14296 549 aaKnown RBP11.94□□□□□ -0.5
CTSD-208ENST00000636843 ARHGAP19Q14CB8 494 aa11.94□□□□□ -0.5
CTSD-208ENST00000636843 HERC3Q15034 1050 aa11.94□□□□□ -0.5
CTSD-208ENST00000636843 PDCD2Q16342 344 aaPredicted RBP11.94□□□□□ -0.5
CTSD-208ENST00000636843 INAQ16352 499 aa11.94□□□□□ -0.5
CTSD-208ENST00000636843 VWA2Q5GFL6 755 aa11.94□□□□□ -0.5
CTSD-208ENST00000636843 CTSL3PQ5NE16 218 aa11.94□□□□□ -0.5
CTSD-208ENST00000636843 PAQR3Q6TCH7 311 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms