RNA–Protein interactions for RNA: ENST00000635727.1

CACNA1A-215, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-215ENST00000635727 PLPPR4Q7Z2D5 763 aa16.82■□□□□ 0.28
CACNA1A-215ENST00000635727 LMF1Q96S06 567 aa16.82■□□□□ 0.28
CACNA1A-215ENST00000635727 CCM2Q9BSQ5 444 aa16.82■□□□□ 0.28
CACNA1A-215ENST00000635727 FAM171A2A8MVW0 826 aa16.82■□□□□ 0.28
CACNA1A-215ENST00000635727 GATMP50440 423 aa16.82■□□□□ 0.28
CACNA1A-215ENST00000635727 PHF13Q86YI8 300 aaPredicted RBP16.82■□□□□ 0.28
CACNA1A-215ENST00000635727 STON2Q8WXE9 905 aa16.82■□□□□ 0.28
CACNA1A-215ENST00000635727 CENPNQ96H22 339 aaPredicted RBP16.82■□□□□ 0.28
CACNA1A-215ENST00000635727 LHX5Q9H2C1 402 aa16.82■□□□□ 0.28
CACNA1A-215ENST00000635727 KCNK13Q9HB14 408 aa16.82■□□□□ 0.28
CACNA1A-215ENST00000635727 NLGN3Q9NZ94 848 aa16.82■□□□□ 0.28
CACNA1A-215ENST00000635727 DNM1LO00429 736 aa16.82■□□□□ 0.28
CACNA1A-215ENST00000635727 PSMD10O75832 226 aa16.82■□□□□ 0.28
CACNA1A-215ENST00000635727 KLF8O95600 359 aaPredicted RBP16.82■□□□□ 0.28
CACNA1A-215ENST00000635727 CX3CR1P49238 355 aa16.82■□□□□ 0.28
CACNA1A-215ENST00000635727 PGAM4Q8N0Y7 254 aa16.82■□□□□ 0.28
CACNA1A-215ENST00000635727 DDX1Q92499 740 aaKnown RBP16.82■□□□□ 0.28
CACNA1A-215ENST00000635727 PLD4Q96BZ4 506 aa16.82■□□□□ 0.28
CACNA1A-215ENST00000635727 MAP3K3Q99759 626 aa16.82■□□□□ 0.28
CACNA1A-215ENST00000635727 SUV39H2Q9H5I1 410 aa16.82■□□□□ 0.28
CACNA1A-215ENST00000635727 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.82■□□□□ 0.28
CACNA1A-215ENST00000635727 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.82■□□□□ 0.28
CACNA1A-215ENST00000635727 ATP1B2P14415 290 aaPredicted RBP16.82■□□□□ 0.28
CACNA1A-215ENST00000635727 ABOP16442 354 aa16.82■□□□□ 0.28
CACNA1A-215ENST00000635727 PTAFRP25105 342 aa16.82■□□□□ 0.28
CACNA1A-215ENST00000635727 DACT2Q5SW24 774 aa16.82■□□□□ 0.28
CACNA1A-215ENST00000635727 DLK2Q6UY11 383 aa16.82■□□□□ 0.28
CACNA1A-215ENST00000635727 CNEP1R1Q8N9A8 125 aa16.82■□□□□ 0.28
CACNA1A-215ENST00000635727 GPR174Q9BXC1 333 aa16.82■□□□□ 0.28
CACNA1A-215ENST00000635727 FLRT1Q9NZU1 646 aa16.82■□□□□ 0.28
CACNA1A-215ENST00000635727 HEMK1Q9Y5R4 338 aaPredicted RBP16.82■□□□□ 0.28
CACNA1A-215ENST00000635727 MYO9BQ13459 2157 aa16.82■□□□□ 0.28
CACNA1A-215ENST00000635727 MEIS3P1A6NDR6 274 aa16.81■□□□□ 0.28
CACNA1A-215ENST00000635727 OR12D1P0DN82 309 aa16.81■□□□□ 0.28
CACNA1A-215ENST00000635727 CHRM1P11229 460 aaPredicted RBP16.81■□□□□ 0.28
CACNA1A-215ENST00000635727 RPS3P23396 243 aaKnown RBP eCLIP16.81■□□□□ 0.28
CACNA1A-215ENST00000635727 RHDQ02161 417 aa16.81■□□□□ 0.28
CACNA1A-215ENST00000635727 OR4C15Q8NGM1 316 aa16.81■□□□□ 0.28
CACNA1A-215ENST00000635727 PROKR1Q8TCW9 393 aa16.81■□□□□ 0.28
CACNA1A-215ENST00000635727 TMCO6Q96DC7 493 aa16.81■□□□□ 0.28
CACNA1A-215ENST00000635727 PTCHD1Q96NR3 888 aa16.81■□□□□ 0.28
CACNA1A-215ENST00000635727 RNF32Q9H0A6 362 aa16.81■□□□□ 0.28
CACNA1A-215ENST00000635727 MS4A12Q9NXJ0 267 aa16.81■□□□□ 0.28
CACNA1A-215ENST00000635727 GPR34Q9UPC5 381 aa16.81■□□□□ 0.28
CACNA1A-215ENST00000635727 MGST1P10620 155 aaKnown RBP16.81■□□□□ 0.28
CACNA1A-215ENST00000635727 C6P13671 934 aa16.81■□□□□ 0.28
CACNA1A-215ENST00000635727 COL28A1Q2UY09 1125 aa16.81■□□□□ 0.28
CACNA1A-215ENST00000635727 TMPRSS7Q7RTY8 843 aa16.81■□□□□ 0.28
CACNA1A-215ENST00000635727 SLC22A18Q96BI1 424 aa16.81■□□□□ 0.28
CACNA1A-215ENST00000635727 ST6GALNAC5Q9BVH7 336 aa16.81■□□□□ 0.28
CACNA1A-215ENST00000635727 HPSEQ9Y251 543 aa16.81■□□□□ 0.28
CACNA1A-215ENST00000635727 LSM5Q9Y4Y9 91 aaKnown RBP16.81■□□□□ 0.28
CACNA1A-215ENST00000635727 MATN3O15232 486 aa16.81■□□□□ 0.28
CACNA1A-215ENST00000635727 SRPRAP08240 638 aaKnown RBP16.81■□□□□ 0.28
CACNA1A-215ENST00000635727 GTF2BQ00403 316 aa16.81■□□□□ 0.28
CACNA1A-215ENST00000635727 PTPRCAPQ14761 206 aa16.81■□□□□ 0.28
CACNA1A-215ENST00000635727 CCL14Q16627 93 aa16.81■□□□□ 0.28
CACNA1A-215ENST00000635727 C9orf135Q5VTT2 229 aa16.81■□□□□ 0.28
CACNA1A-215ENST00000635727 TMEM198Q66K66 360 aa16.81■□□□□ 0.28
CACNA1A-215ENST00000635727 VSTM1Q6UX27 236 aa16.81■□□□□ 0.28
CACNA1A-215ENST00000635727 PGM2Q96G03 612 aa16.81■□□□□ 0.28
CACNA1A-215ENST00000635727 ZNF681Q96N22 645 aa16.81■□□□□ 0.28
CACNA1A-215ENST00000635727 NDUFAF4Q9P032 175 aa16.81■□□□□ 0.28
CACNA1A-215ENST00000635727 PRORSD1PA6NEY8 169 aa16.81■□□□□ 0.28
CACNA1A-215ENST00000635727 NOTOA8MTQ0 251 aa16.81■□□□□ 0.28
CACNA1A-215ENST00000635727 ANKRD28O15084 1053 aa16.81■□□□□ 0.28
CACNA1A-215ENST00000635727 B4GAT1O43505 415 aa16.81■□□□□ 0.28
CACNA1A-215ENST00000635727 KNG1P01042 644 aa16.81■□□□□ 0.28
CACNA1A-215ENST00000635727 ASTE1Q2TB18 679 aaPredicted RBP16.81■□□□□ 0.28
CACNA1A-215ENST00000635727 FAM83HQ6ZRV2 1179 aaPredicted RBP16.81■□□□□ 0.28
CACNA1A-215ENST00000635727 OR6C4Q8NGE1 309 aa16.81■□□□□ 0.28
CACNA1A-215ENST00000635727 OR5K1Q8NHB7 308 aa16.81■□□□□ 0.28
CACNA1A-215ENST00000635727 FBXL18Q96ME1 805 aa16.81■□□□□ 0.28
CACNA1A-215ENST00000635727 SULT4A1Q9BR01 284 aa16.81■□□□□ 0.28
CACNA1A-215ENST00000635727 OXSMQ9NWU1 459 aa16.81■□□□□ 0.28
CACNA1A-215ENST00000635727 LOC100130705A0A1B0GUX0 176 aa16.81■□□□□ 0.28
CACNA1A-215ENST00000635727 SMIM35A0A1B0GVV1 85 aa16.81■□□□□ 0.28
CACNA1A-215ENST00000635727 SPATA31C2B4DYI2 1134 aa16.81■□□□□ 0.28
CACNA1A-215ENST00000635727 POP7O75817 140 aaKnown RBP16.81■□□□□ 0.28
CACNA1A-215ENST00000635727 NXPH3O95157 252 aa16.81■□□□□ 0.28
CACNA1A-215ENST00000635727 RBMS1P29558 406 aaKnown RBP16.81■□□□□ 0.28
CACNA1A-215ENST00000635727 ZC3HC1Q86WB0 502 aaKnown RBP16.81■□□□□ 0.28
CACNA1A-215ENST00000635727 DUXAA6NLW8 204 aa16.81■□□□□ 0.28
CACNA1A-215ENST00000635727 HAS3O00219 553 aa16.81■□□□□ 0.28
CACNA1A-215ENST00000635727 CCNFP41002 786 aa16.81■□□□□ 0.28
CACNA1A-215ENST00000635727 ROR2Q01974 943 aaKnown RBP16.81■□□□□ 0.28
CACNA1A-215ENST00000635727 IL17AQ16552 155 aa16.81■□□□□ 0.28
CACNA1A-215ENST00000635727 SIRPB2Q5JXA9 342 aa16.81■□□□□ 0.28
CACNA1A-215ENST00000635727 CMTM8Q8IZV2 173 aa16.81■□□□□ 0.28
CACNA1A-215ENST00000635727 ARL14Q8N4G2 192 aa16.81■□□□□ 0.28
CACNA1A-215ENST00000635727 GOLM1Q8NBJ4 401 aa16.81■□□□□ 0.28
CACNA1A-215ENST00000635727 GRPEL2Q8TAA5 225 aa16.81■□□□□ 0.28
CACNA1A-215ENST00000635727 MALSU1Q96EH3 234 aa16.81■□□□□ 0.28
CACNA1A-215ENST00000635727 KCNA7Q96RP8 456 aa16.81■□□□□ 0.28
CACNA1A-215ENST00000635727 CLEC4EQ9ULY5 219 aa16.81■□□□□ 0.28
CACNA1A-215ENST00000635727 DYRK1AQ13627 763 aa16.8■□□□□ 0.28
CACNA1A-215ENST00000635727 PLD5Q8N7P1 536 aa16.8■□□□□ 0.28
CACNA1A-215ENST00000635727 OR4K1Q8NGD4 311 aa16.8■□□□□ 0.28
CACNA1A-215ENST00000635727 PRTFDC1Q9NRG1 225 aa16.8■□□□□ 0.28
CACNA1A-215ENST00000635727 KIF20BQ96Q89 1820 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms