RNA–Protein interactions for RNA: ENST00000634889.1

CDC42BPB-209, Transcript of CDC42 binding protein kinase beta, human

TSL 3

Gene CDC42BPB, Length 507 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDC42BPB-209	ENST00000634889	RGMA	Q96B86	450 aa		13.91	□□□□□ -0.18
CDC42BPB-209	ENST00000634889	SERPINI1	Q99574	410 aa		13.91	□□□□□ -0.18
CDC42BPB-209	ENST00000634889	OR51B5	Q9H339	312 aa		13.91	□□□□□ -0.18
CDC42BPB-209	ENST00000634889	CENPH	Q9H3R5	247 aa		13.91	□□□□□ -0.18
CDC42BPB-209	ENST00000634889	BRF2	Q9HAW0	419 aa		13.91	□□□□□ -0.18
CDC42BPB-209	ENST00000634889	LYRM4	Q9HD34	91 aa		13.91	□□□□□ -0.18
CDC42BPB-209	ENST00000634889	LANCL2	Q9NS86	450 aa		13.91	□□□□□ -0.18
CDC42BPB-209	ENST00000634889	ARGLU1	Q9NWB6	273 aa	Predicted RBP	13.91	□□□□□ -0.18
CDC42BPB-209	ENST00000634889	FBXL4	Q9UKA2	621 aa		13.91	□□□□□ -0.18
CDC42BPB-209	ENST00000634889	IGSF10	Q6WRI0	2623 aa		13.91	□□□□□ -0.18
CDC42BPB-209	ENST00000634889	GOLGA6L10	A6NI86	522 aa		13.9	□□□□□ -0.18
CDC42BPB-209	ENST00000634889	MKRN2OS	H3BPM6	223 aa		13.9	□□□□□ -0.18
CDC42BPB-209	ENST00000634889	PLPP1	O14494	284 aa		13.9	□□□□□ -0.18
CDC42BPB-209	ENST00000634889	DNAJB6	O75190	326 aa		13.9	□□□□□ -0.18
CDC42BPB-209	ENST00000634889	ALOX12B	O75342	701 aa		13.9	□□□□□ -0.18
CDC42BPB-209	ENST00000634889	HP	P00738	406 aa		13.9	□□□□□ -0.18
CDC42BPB-209	ENST00000634889	KRT6A	P02538	564 aa		13.9	□□□□□ -0.18
CDC42BPB-209	ENST00000634889	KRT6B	P04259	564 aa		13.9	□□□□□ -0.18
CDC42BPB-209	ENST00000634889	CREB1	P16220	341 aa		13.9	□□□□□ -0.18
CDC42BPB-209	ENST00000634889	ATP5A1	P25705	553 aa	Known RBP	13.9	□□□□□ -0.18
CDC42BPB-209	ENST00000634889	CERS1	P27544	350 aa		13.9	□□□□□ -0.18
CDC42BPB-209	ENST00000634889	SSR2	P43308	183 aa		13.9	□□□□□ -0.18
CDC42BPB-209	ENST00000634889	KRT6C	P48668	564 aa		13.9	□□□□□ -0.18
CDC42BPB-209	ENST00000634889	NEK2	P51955	445 aa		13.9	□□□□□ -0.18
CDC42BPB-209	ENST00000634889	EFNA3	P52797	238 aa		13.9	□□□□□ -0.18
CDC42BPB-209	ENST00000634889	SOX8	P57073	446 aa		13.9	□□□□□ -0.18
CDC42BPB-209	ENST00000634889	RAB38	P57729	211 aa		13.9	□□□□□ -0.18
CDC42BPB-209	ENST00000634889	RHAG	Q02094	409 aa		13.9	□□□□□ -0.18
CDC42BPB-209	ENST00000634889	AIMP2	Q13155	320 aa	Known RBP	13.9	□□□□□ -0.18
CDC42BPB-209	ENST00000634889	KCNAB2	Q13303	367 aa		13.9	□□□□□ -0.18
CDC42BPB-209	ENST00000634889	RUNX2	Q13950	521 aa		13.9	□□□□□ -0.18
CDC42BPB-209	ENST00000634889	CASP8	Q14790	479 aa		13.9	□□□□□ -0.18
CDC42BPB-209	ENST00000634889	CPZ	Q66K79	652 aa		13.9	□□□□□ -0.18
CDC42BPB-209	ENST00000634889	QSOX2	Q6ZRP7	698 aa		13.9	□□□□□ -0.18
CDC42BPB-209	ENST00000634889	RNF175	Q8N4F7	328 aa		13.9	□□□□□ -0.18
CDC42BPB-209	ENST00000634889	CDYL2	Q8N8U2	506 aa		13.9	□□□□□ -0.18
CDC42BPB-209	ENST00000634889	ACOT4	Q8N9L9	421 aa		13.9	□□□□□ -0.18
CDC42BPB-209	ENST00000634889	PLPP5	Q8NEB5	264 aa		13.9	□□□□□ -0.18
CDC42BPB-209	ENST00000634889	AGAP11	Q8TF27	550 aa		13.9	□□□□□ -0.18
CDC42BPB-209	ENST00000634889	SREK1	Q8WXA9	508 aa	Known RBP	13.9	□□□□□ -0.18
CDC42BPB-209	ENST00000634889	TRMO	Q9BU70	441 aa		13.9	□□□□□ -0.18
CDC42BPB-209	ENST00000634889	RBCK1	Q9BYM8	510 aa		13.9	□□□□□ -0.18
CDC42BPB-209	ENST00000634889	MID1IP1	Q9NPA3	183 aa		13.9	□□□□□ -0.18
CDC42BPB-209	ENST00000634889	C19orf25	Q9UFG5	118 aa	Predicted RBP	13.9	□□□□□ -0.18
CDC42BPB-209	ENST00000634889	DAPP1	Q9UN19	280 aa		13.9	□□□□□ -0.18
CDC42BPB-209	ENST00000634889	MRPS33	Q9Y291	106 aa	Known RBP	13.9	□□□□□ -0.18
CDC42BPB-209	ENST00000634889	CHD6	Q8TD26	2715 aa		13.9	□□□□□ -0.18
CDC42BPB-209	ENST00000634889	IGHV1-45	A0A0A0MS14	117 aa		13.89	□□□□□ -0.19
CDC42BPB-209	ENST00000634889	SAP18	O00422	153 aa	Known RBP	13.89	□□□□□ -0.19
CDC42BPB-209	ENST00000634889	UBFD1	O14562	309 aa	Known RBP	13.89	□□□□□ -0.19
CDC42BPB-209	ENST00000634889	TM9SF1	O15321	606 aa		13.89	□□□□□ -0.19
CDC42BPB-209	ENST00000634889	CDC123	O75794	336 aa	Predicted RBP	13.89	□□□□□ -0.19
CDC42BPB-209	ENST00000634889	CEACAM4	O75871	244 aa		13.89	□□□□□ -0.19
CDC42BPB-209	ENST00000634889	PDYN	P01213	254 aa		13.89	□□□□□ -0.19
CDC42BPB-209	ENST00000634889	HSD3B1	P14060	373 aa		13.89	□□□□□ -0.19
CDC42BPB-209	ENST00000634889	HSD3B2	P26439	372 aa		13.89	□□□□□ -0.19
CDC42BPB-209	ENST00000634889	HMOX2	P30519	316 aa		13.89	□□□□□ -0.19
CDC42BPB-209	ENST00000634889	ALDH3A1	P30838	453 aa		13.89	□□□□□ -0.19
CDC42BPB-209	ENST00000634889	ETV4	P43268	484 aa		13.89	□□□□□ -0.19
CDC42BPB-209	ENST00000634889	LIM2	P55344	173 aa		13.89	□□□□□ -0.19
CDC42BPB-209	ENST00000634889	CSTF3	Q12996	717 aa	Known RBP	13.89	□□□□□ -0.19
CDC42BPB-209	ENST00000634889	ABRAXAS2	Q15018	415 aa		13.89	□□□□□ -0.19
CDC42BPB-209	ENST00000634889	ZNF793	Q6ZN11	406 aa		13.89	□□□□□ -0.19
CDC42BPB-209	ENST00000634889	NDUFAF7	Q7L592	441 aa		13.89	□□□□□ -0.19
CDC42BPB-209	ENST00000634889	HOMEZ	Q8IX15	550 aa		13.89	□□□□□ -0.19
CDC42BPB-209	ENST00000634889	SHISA5	Q8N114	240 aa		13.89	□□□□□ -0.19
CDC42BPB-209	ENST00000634889	ZCCHC7	Q8N3Z6	543 aa	Known RBP	13.89	□□□□□ -0.19
CDC42BPB-209	ENST00000634889	EXD3	Q8N9H8	876 aa		13.89	□□□□□ -0.19
CDC42BPB-209	ENST00000634889	METTL6	Q8TCB7	284 aa		13.89	□□□□□ -0.19
CDC42BPB-209	ENST00000634889	SELENOM	Q8WWX9	145 aa		13.89	□□□□□ -0.19
CDC42BPB-209	ENST00000634889	MTFMT	Q96DP5	389 aa	Known RBP	13.89	□□□□□ -0.19
CDC42BPB-209	ENST00000634889	CNDP1	Q96KN2	507 aa		13.89	□□□□□ -0.19
CDC42BPB-209	ENST00000634889	PKNOX2	Q96KN3	472 aa		13.89	□□□□□ -0.19
CDC42BPB-209	ENST00000634889	ZNF717	Q9BY31	904 aa	Predicted RBP	13.89	□□□□□ -0.19
CDC42BPB-209	ENST00000634889	TRIM55	Q9BYV6	548 aa		13.89	□□□□□ -0.19
CDC42BPB-209	ENST00000634889	DDX31	Q9H8H2	851 aa	Known RBP	13.89	□□□□□ -0.19
CDC42BPB-209	ENST00000634889	ATP13A2	Q9NQ11	1180 aa		13.89	□□□□□ -0.19
CDC42BPB-209	ENST00000634889	PRDM9	Q9NQV7	894 aa		13.89	□□□□□ -0.19
CDC42BPB-209	ENST00000634889	FARSB	Q9NSD9	589 aa	Known RBP	13.89	□□□□□ -0.19
CDC42BPB-209	ENST00000634889	RIC8B	Q9NVN3	520 aa		13.89	□□□□□ -0.19
CDC42BPB-209	ENST00000634889	NMRK1	Q9NWW6	199 aa		13.89	□□□□□ -0.19
CDC42BPB-209	ENST00000634889	MS4A12	Q9NXJ0	267 aa		13.89	□□□□□ -0.19
CDC42BPB-209	ENST00000634889	G3BP2	Q9UN86	482 aa	Known RBP	13.89	□□□□□ -0.19
CDC42BPB-209	ENST00000634889	MMACHC	Q9Y4U1	282 aa		13.89	□□□□□ -0.19
CDC42BPB-209	ENST00000634889	PCDHGA9	Q9Y5G4	932 aa	Known RBP	13.89	□□□□□ -0.19
CDC42BPB-209	ENST00000634889	SPACA6	W5XKT8	324 aa		13.89	□□□□□ -0.19
CDC42BPB-209	ENST00000634889	NSG1	A0A0A6YYJ2	146 aa		13.88	□□□□□ -0.19
CDC42BPB-209	ENST00000634889	BLACE	A4D250	179 aa		13.88	□□□□□ -0.19
CDC42BPB-209	ENST00000634889	SYNDIG1L	A6NDD5	238 aa		13.88	□□□□□ -0.19
CDC42BPB-209	ENST00000634889	RTCA	O00442	366 aa	Known RBP	13.88	□□□□□ -0.19
CDC42BPB-209	ENST00000634889	MANBA	O00462	879 aa		13.88	□□□□□ -0.19
CDC42BPB-209	ENST00000634889	CLDN4	O14493	209 aa		13.88	□□□□□ -0.19
CDC42BPB-209	ENST00000634889	KLHL41	O60662	606 aa		13.88	□□□□□ -0.19
CDC42BPB-209	ENST00000634889	PRMT3	O60678	531 aa		13.88	□□□□□ -0.19
CDC42BPB-209	ENST00000634889	SH3BGRL	O75368	114 aa		13.88	□□□□□ -0.19
CDC42BPB-209	ENST00000634889	ULK1	O75385	1050 aa		13.88	□□□□□ -0.19
CDC42BPB-209	ENST00000634889	DNAJB5	O75953	348 aa		13.88	□□□□□ -0.19
CDC42BPB-209	ENST00000634889	ZWINT	O95229	277 aa		13.88	□□□□□ -0.19
CDC42BPB-209	ENST00000634889	ETHE1	O95571	254 aa		13.88	□□□□□ -0.19
CDC42BPB-209	ENST00000634889	COX6A1	P12074	109 aa		13.88	□□□□□ -0.19

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