RNA–Protein interactions for RNA: ENST00000628614.1

SPTAN1-214, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTAN1, Length 993 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-214ENST00000628614 SRFBP1Q8NEF9 429 aaKnown RBP16.11■□□□□ 0.17
SPTAN1-214ENST00000628614 KCTD4Q8WVF5 259 aa16.11■□□□□ 0.17
SPTAN1-214ENST00000628614 QRFPRQ96P65 431 aa16.11■□□□□ 0.17
SPTAN1-214ENST00000628614 NPAS2Q99743 824 aa16.11■□□□□ 0.17
SPTAN1-214ENST00000628614 ACSS3Q9H6R3 686 aa16.11■□□□□ 0.17
SPTAN1-214ENST00000628614 NECTIN3Q9NQS3 549 aa16.11■□□□□ 0.17
SPTAN1-214ENST00000628614 PRTFDC1Q9NRG1 225 aa16.11■□□□□ 0.17
SPTAN1-214ENST00000628614 NINJ2Q9NZG7 142 aa16.11■□□□□ 0.17
SPTAN1-214ENST00000628614 OSGIN2Q9Y236 505 aa16.11■□□□□ 0.17
SPTAN1-214ENST00000628614 ASB1Q9Y576 335 aa16.11■□□□□ 0.17
SPTAN1-214ENST00000628614 SCN2AQ99250 2005 aa16.11■□□□□ 0.17
SPTAN1-214ENST00000628614 HIVEP3Q5T1R4 2406 aa16.1■□□□□ 0.17
SPTAN1-214ENST00000628614 NBPF19A0A087WUL8 3843 aa16.1■□□□□ 0.17
SPTAN1-214ENST00000628614 GABRR3A8MPY1 467 aa16.1■□□□□ 0.17
SPTAN1-214ENST00000628614 TUBB4AP04350 444 aa16.1■□□□□ 0.17
SPTAN1-214ENST00000628614 SERPINB1P30740 379 aa16.1■□□□□ 0.17
SPTAN1-214ENST00000628614 MSH2P43246 934 aa16.1■□□□□ 0.17
SPTAN1-214ENST00000628614 SERPINB8P50452 374 aa16.1■□□□□ 0.17
SPTAN1-214ENST00000628614 TDGF1P3P51864 188 aa16.1■□□□□ 0.17
SPTAN1-214ENST00000628614 HSD17B7P56937 341 aa16.1■□□□□ 0.17
SPTAN1-214ENST00000628614 IRF9Q00978 393 aa16.1■□□□□ 0.17
SPTAN1-214ENST00000628614 PCDH1Q08174 1060 aa16.1■□□□□ 0.17
SPTAN1-214ENST00000628614 RUNX2Q13950 521 aa16.1■□□□□ 0.17
SPTAN1-214ENST00000628614 ACAP2Q15057 778 aa16.1■□□□□ 0.17
SPTAN1-214ENST00000628614 TERF2Q15554 542 aa16.1■□□□□ 0.17
SPTAN1-214ENST00000628614 OR1C1Q15619 314 aa16.1■□□□□ 0.17
SPTAN1-214ENST00000628614 ADNP2Q6IQ32 1131 aa16.1■□□□□ 0.17
SPTAN1-214ENST00000628614 MED27Q6P2C8 311 aa16.1■□□□□ 0.17
SPTAN1-214ENST00000628614 KLC3Q6P597 504 aa16.1■□□□□ 0.17
SPTAN1-214ENST00000628614 RPS19BP1Q86WX3 136 aaKnown RBP16.1■□□□□ 0.17
SPTAN1-214ENST00000628614 SCUBE1Q8IWY4 988 aa16.1■□□□□ 0.17
SPTAN1-214ENST00000628614 ZNF595Q8IYB9 648 aa16.1■□□□□ 0.17
SPTAN1-214ENST00000628614 KIF2BQ8N4N8 673 aa16.1■□□□□ 0.17
SPTAN1-214ENST00000628614 MDS2Q8NDY4 140 aa16.1■□□□□ 0.17
SPTAN1-214ENST00000628614 KCNC2Q96PR1 638 aa16.1■□□□□ 0.17
SPTAN1-214ENST00000628614 FMO2Q99518 471 aa16.1■□□□□ 0.17
SPTAN1-214ENST00000628614 ROGDIQ9GZN7 287 aa16.1■□□□□ 0.17
SPTAN1-214ENST00000628614 CDCP1Q9H5V8 836 aa16.1■□□□□ 0.17
SPTAN1-214ENST00000628614 PRM3Q9NNZ6 103 aa16.1■□□□□ 0.17
SPTAN1-214ENST00000628614 UTP20O75691 2785 aaKnown RBP16.1■□□□□ 0.17
SPTAN1-214ENST00000628614 MAST4O15021 2626 aa16.1■□□□□ 0.17
SPTAN1-214ENST00000628614 A0A096LPK6 155 aa16.09■□□□□ 0.17
SPTAN1-214ENST00000628614 HMX2A2RU54 273 aa16.09■□□□□ 0.17
SPTAN1-214ENST00000628614 KIF2AO00139 706 aaPredicted RBP16.09■□□□□ 0.17
SPTAN1-214ENST00000628614 KLHL2O95198 593 aa16.09■□□□□ 0.17
SPTAN1-214ENST00000628614 CTAGE8P0CG41 777 aa16.09■□□□□ 0.17
SPTAN1-214ENST00000628614 CD46P15529 392 aa16.09■□□□□ 0.17
SPTAN1-214ENST00000628614 EPB42P16452 691 aa16.09■□□□□ 0.17
SPTAN1-214ENST00000628614 CERS1P27544 350 aa16.09■□□□□ 0.17
SPTAN1-214ENST00000628614 TYK2P29597 1187 aa16.09■□□□□ 0.17
SPTAN1-214ENST00000628614 CD96P40200 585 aa16.09■□□□□ 0.17
SPTAN1-214ENST00000628614 PER3P56645 1201 aa16.09■□□□□ 0.17
SPTAN1-214ENST00000628614 OC90Q02509 493 aaPredicted RBP16.09■□□□□ 0.17
SPTAN1-214ENST00000628614 SLC13A2Q13183 592 aa16.09■□□□□ 0.17
SPTAN1-214ENST00000628614 GLE1Q53GS7 698 aaKnown RBP16.09■□□□□ 0.17
SPTAN1-214ENST00000628614 CTAGE4Q8IX94 777 aa16.09■□□□□ 0.17
SPTAN1-214ENST00000628614 LAS2Q8IYD9 372 aa16.09■□□□□ 0.17
SPTAN1-214ENST00000628614 FAM47BQ8NA70 645 aa16.09■□□□□ 0.17
SPTAN1-214ENST00000628614 TMEM178AQ8NBL3 297 aa16.09■□□□□ 0.17
SPTAN1-214ENST00000628614 NOA1Q8NC60 698 aaKnown RBP16.09■□□□□ 0.17
SPTAN1-214ENST00000628614 NFAM1Q8NET5 270 aaPredicted RBP16.09■□□□□ 0.17
SPTAN1-214ENST00000628614 SIGLEC12Q96PQ1 595 aa16.09■□□□□ 0.17
SPTAN1-214ENST00000628614 F2RL3Q96RI0 385 aa16.09■□□□□ 0.17
SPTAN1-214ENST00000628614 MS4A8Q9BY19 250 aa16.09■□□□□ 0.17
SPTAN1-214ENST00000628614 FUT8Q9BYC5 575 aa16.09■□□□□ 0.17
SPTAN1-214ENST00000628614 CDC42EP4Q9H3Q1 356 aaKnown RBP16.09■□□□□ 0.17
SPTAN1-214ENST00000628614 DMGDHQ9UI17 866 aaKnown RBP16.09■□□□□ 0.17
SPTAN1-214ENST00000628614 DAPP1Q9UN19 280 aa16.09■□□□□ 0.17
SPTAN1-214ENST00000628614 ANGPTL3Q9Y5C1 460 aa16.09■□□□□ 0.17
SPTAN1-214ENST00000628614 SPTBN1Q01082 2364 aaKnown RBP16.09■□□□□ 0.17
SPTAN1-214ENST00000628614 A8MUA0 341 aa16.08■□□□□ 0.16
SPTAN1-214ENST00000628614 LRRTM2O43300 516 aa16.08■□□□□ 0.16
SPTAN1-214ENST00000628614 MAN1A2O60476 641 aa16.08■□□□□ 0.16
SPTAN1-214ENST00000628614 MYO1DO94832 1006 aa16.08■□□□□ 0.16
SPTAN1-214ENST00000628614 ACSL3O95573 720 aa16.08■□□□□ 0.16
SPTAN1-214ENST00000628614 ALDOAP04075 364 aaKnown RBP16.08■□□□□ 0.16
SPTAN1-214ENST00000628614 INHBAP08476 426 aa16.08■□□□□ 0.16
SPTAN1-214ENST00000628614 STSP08842 583 aa16.08■□□□□ 0.16
SPTAN1-214ENST00000628614 PCNAP12004 261 aa16.08■□□□□ 0.16
SPTAN1-214ENST00000628614 MTHFD2P13995 350 aa16.08■□□□□ 0.16
SPTAN1-214ENST00000628614 GFAPP14136 432 aa16.08■□□□□ 0.16
SPTAN1-214ENST00000628614 LIM2P55344 173 aa16.08■□□□□ 0.16
SPTAN1-214ENST00000628614 NAA30Q147X3 362 aaPredicted RBP16.08■□□□□ 0.16
SPTAN1-214ENST00000628614 SETDB1Q15047 1291 aa16.08■□□□□ 0.16
SPTAN1-214ENST00000628614 TMEM35AQ53FP2 167 aa16.08■□□□□ 0.16
SPTAN1-214ENST00000628614 GFRALQ6UXV0 394 aa16.08■□□□□ 0.16
SPTAN1-214ENST00000628614 CHSY3Q70JA7 882 aa16.08■□□□□ 0.16
SPTAN1-214ENST00000628614 TAOK1Q7L7X3 1001 aa16.08■□□□□ 0.16
SPTAN1-214ENST00000628614 B3GNT7Q8NFL0 401 aa16.08■□□□□ 0.16
SPTAN1-214ENST00000628614 ZNF473Q8WTR7 871 aaKnown RBP16.08■□□□□ 0.16
SPTAN1-214ENST00000628614 IFT81Q8WYA0 676 aa16.08■□□□□ 0.16
SPTAN1-214ENST00000628614 SCMH1Q96GD3 660 aa16.08■□□□□ 0.16
SPTAN1-214ENST00000628614 TBCDQ9BTW9 1192 aa16.08■□□□□ 0.16
SPTAN1-214ENST00000628614 DEFB126Q9BYW3 111 aa16.08■□□□□ 0.16
SPTAN1-214ENST00000628614 LYRM4Q9HD34 91 aa16.08■□□□□ 0.16
SPTAN1-214ENST00000628614 ADAP2Q9NPF8 381 aa16.08■□□□□ 0.16
SPTAN1-214ENST00000628614 PNO1Q9NRX1 252 aaKnown RBP16.08■□□□□ 0.16
SPTAN1-214ENST00000628614 ANKRD10Q9NXR5 420 aa16.08■□□□□ 0.16
SPTAN1-214ENST00000628614 ADGRE2Q9UHX3 823 aa16.08■□□□□ 0.16
SPTAN1-214ENST00000628614 IKBKGQ9Y6K9 419 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms