RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-223ENST00000627587 UBE3DQ7Z6J8 389 aa9.05□□□□□ -0.96
PDLIM5-223ENST00000627587 PACS2Q86VP3 889 aa9.05□□□□□ -0.96
PDLIM5-223ENST00000627587 ZNF761Q86XN6 746 aaPredicted RBP9.05□□□□□ -0.96
PDLIM5-223ENST00000627587 MSRB3Q8IXL7 192 aa9.05□□□□□ -0.96
PDLIM5-223ENST00000627587 SLC15A3Q8IY34 581 aa9.05□□□□□ -0.96
PDLIM5-223ENST00000627587 ZNF843Q8N446 348 aa9.05□□□□□ -0.96
PDLIM5-223ENST00000627587 AVL9Q8NBF6 648 aa9.05□□□□□ -0.96
PDLIM5-223ENST00000627587 LMX1AQ8TE12 382 aa9.05□□□□□ -0.96
PDLIM5-223ENST00000627587 SLC13A3Q8WWT9 602 aa9.05□□□□□ -0.96
PDLIM5-223ENST00000627587 STARD8Q92502 1023 aa9.05□□□□□ -0.96
PDLIM5-223ENST00000627587 GFM2Q969S9 779 aaKnown RBP9.05□□□□□ -0.96
PDLIM5-223ENST00000627587 PPM1MQ96MI6 270 aa9.05□□□□□ -0.96
PDLIM5-223ENST00000627587 CENPKQ9BS16 269 aa9.05□□□□□ -0.96
PDLIM5-223ENST00000627587 ABCG4Q9H172 646 aa9.05□□□□□ -0.96
PDLIM5-223ENST00000627587 CMTM6Q9NX76 183 aa9.05□□□□□ -0.96
PDLIM5-223ENST00000627587 NKX1-2Q9UD57 310 aaPredicted RBP9.05□□□□□ -0.96
PDLIM5-223ENST00000627587 SNX7Q9UNH6 387 aa9.05□□□□□ -0.96
PDLIM5-223ENST00000627587 MAPRE3Q9UPY8 281 aa9.05□□□□□ -0.96
PDLIM5-223ENST00000627587 CSNK1G3Q9Y6M4 447 aa9.05□□□□□ -0.96
PDLIM5-223ENST00000627587 TRBV5-3A0A0A0MS03 114 aa9.04□□□□□ -0.96
PDLIM5-223ENST00000627587 GSAPA4D1B5 854 aa9.04□□□□□ -0.96
PDLIM5-223ENST00000627587 OR6C74A6NCV1 312 aa9.04□□□□□ -0.96
PDLIM5-223ENST00000627587 ACOT8O14734 319 aa9.04□□□□□ -0.96
PDLIM5-223ENST00000627587 AQP9O43315 295 aa9.04□□□□□ -0.96
PDLIM5-223ENST00000627587 NOBOXO60393 691 aa9.04□□□□□ -0.96
PDLIM5-223ENST00000627587 PIAS2O75928 621 aa9.04□□□□□ -0.96
PDLIM5-223ENST00000627587 SEMA3DO95025 777 aa9.04□□□□□ -0.96
PDLIM5-223ENST00000627587 PRB1P04280 392 aa9.04□□□□□ -0.96
PDLIM5-223ENST00000627587 PLA2G2AP14555 144 aa9.04□□□□□ -0.96
PDLIM5-223ENST00000627587 UGT2B7P16662 529 aa9.04□□□□□ -0.96
PDLIM5-223ENST00000627587 ME2P23368 584 aa9.04□□□□□ -0.96
PDLIM5-223ENST00000627587 GSTM2P28161 218 aa9.04□□□□□ -0.96
PDLIM5-223ENST00000627587 TPP2P29144 1249 aaPredicted RBP9.04□□□□□ -0.96
PDLIM5-223ENST00000627587 S100A3P33764 101 aa9.04□□□□□ -0.96
PDLIM5-223ENST00000627587 GRIA3P42263 894 aa9.04□□□□□ -0.96
PDLIM5-223ENST00000627587 SLC7A2P52569 658 aa9.04□□□□□ -0.96
PDLIM5-223ENST00000627587 MAZP56270 477 aaKnown RBP9.04□□□□□ -0.96
PDLIM5-223ENST00000627587 PPP1CAP62136 330 aa9.04□□□□□ -0.96
PDLIM5-223ENST00000627587 ZIC1Q15915 447 aa9.04□□□□□ -0.96
PDLIM5-223ENST00000627587 MAPKAPK3Q16644 382 aa9.04□□□□□ -0.96
PDLIM5-223ENST00000627587 PRSS53Q2L4Q9 553 aa9.04□□□□□ -0.96
PDLIM5-223ENST00000627587 RABL3Q5HYI8 236 aa9.04□□□□□ -0.96
PDLIM5-223ENST00000627587 C6orf10Q5SRN2 563 aa9.04□□□□□ -0.96
PDLIM5-223ENST00000627587 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.04□□□□□ -0.96
PDLIM5-223ENST00000627587 DEPDC1Q5TB30 811 aa9.04□□□□□ -0.96
PDLIM5-223ENST00000627587 KHDRBS2Q5VWX1 349 aaKnown RBP9.04□□□□□ -0.96
PDLIM5-223ENST00000627587 TRIM73Q86UV7 250 aa9.04□□□□□ -0.96
PDLIM5-223ENST00000627587 PAQR7Q86WK9 346 aa9.04□□□□□ -0.96
PDLIM5-223ENST00000627587 C17orf82Q86X59 251 aaPredicted RBP9.04□□□□□ -0.96
PDLIM5-223ENST00000627587 SDR16C5Q8N3Y7 309 aa9.04□□□□□ -0.96
PDLIM5-223ENST00000627587 ZNF548Q8NEK5 533 aaPredicted RBP9.04□□□□□ -0.96
PDLIM5-223ENST00000627587 OR7A2PQ8NGA2 310 aa9.04□□□□□ -0.96
PDLIM5-223ENST00000627587 OR10G6Q8NH81 332 aa9.04□□□□□ -0.96
PDLIM5-223ENST00000627587 CDC26Q8NHZ8 85 aa9.04□□□□□ -0.96
PDLIM5-223ENST00000627587 COL26A1Q96A83 441 aa9.04□□□□□ -0.96
PDLIM5-223ENST00000627587 TMEM125Q96AQ2 219 aa9.04□□□□□ -0.96
PDLIM5-223ENST00000627587 FCRL4Q96PJ5 515 aa9.04□□□□□ -0.96
PDLIM5-223ENST00000627587 OR52E6Q96RD3 313 aa9.04□□□□□ -0.96
PDLIM5-223ENST00000627587 F2RL3Q96RI0 385 aa9.04□□□□□ -0.96
PDLIM5-223ENST00000627587 RASSF4Q9H2L5 321 aa9.04□□□□□ -0.96
PDLIM5-223ENST00000627587 POLR1BQ9H9Y6 1135 aa9.04□□□□□ -0.96
PDLIM5-223ENST00000627587 UCKL1Q9NWZ5 548 aa9.04□□□□□ -0.96
PDLIM5-223ENST00000627587 SLC25A37Q9NYZ2 338 aa9.04□□□□□ -0.96
PDLIM5-223ENST00000627587 VAPAQ9P0L0 249 aa9.04□□□□□ -0.96
PDLIM5-223ENST00000627587 ENTPD2Q9Y5L3 495 aa9.04□□□□□ -0.96
PDLIM5-223ENST00000627587 OR2A25A4D2G3 310 aa9.04□□□□□ -0.96
PDLIM5-223ENST00000627587 C2orf74A8MZ97 194 aa9.04□□□□□ -0.96
PDLIM5-223ENST00000627587 J3QKU1 62 aa9.04□□□□□ -0.96
PDLIM5-223ENST00000627587 RTCAO00442 366 aaKnown RBP9.04□□□□□ -0.96
PDLIM5-223ENST00000627587 AKAP10O43572 662 aa9.04□□□□□ -0.96
PDLIM5-223ENST00000627587 PRAMEF10O60809 474 aa9.04□□□□□ -0.96
PDLIM5-223ENST00000627587 SDC3O75056 442 aa9.04□□□□□ -0.96
PDLIM5-223ENST00000627587 CLEC3AO75596 197 aa9.04□□□□□ -0.96
PDLIM5-223ENST00000627587 KRT36O76013 467 aa9.04□□□□□ -0.96
PDLIM5-223ENST00000627587 KCNH1O95259 989 aa9.04□□□□□ -0.96
PDLIM5-223ENST00000627587 C1QCP02747 245 aa9.04□□□□□ -0.96
PDLIM5-223ENST00000627587 STATHP02808 62 aa9.04□□□□□ -0.96
PDLIM5-223ENST00000627587 GIMD1P0DJR0 217 aa9.04□□□□□ -0.96
PDLIM5-223ENST00000627587 PIM1P11309 404 aaPredicted RBP9.04□□□□□ -0.96
PDLIM5-223ENST00000627587 POLR2CP19387 275 aaPredicted RBP9.04□□□□□ -0.96
PDLIM5-223ENST00000627587 BSGP35613 385 aa9.04□□□□□ -0.96
PDLIM5-223ENST00000627587 MLLT3P42568 568 aaPredicted RBP9.04□□□□□ -0.96
PDLIM5-223ENST00000627587 PLIN5Q00G26 463 aa9.04□□□□□ -0.96
PDLIM5-223ENST00000627587 SRSF11Q05519 484 aaKnown RBP9.04□□□□□ -0.96
PDLIM5-223ENST00000627587 ZNF763Q0D2J5 394 aa9.04□□□□□ -0.96
PDLIM5-223ENST00000627587 BIRC2Q13490 618 aa9.04□□□□□ -0.96
PDLIM5-223ENST00000627587 SELPLGQ14242 412 aa9.04□□□□□ -0.96
PDLIM5-223ENST00000627587 HKDC1Q2TB90 917 aa9.04□□□□□ -0.96
PDLIM5-223ENST00000627587 ADPRMQ3LIE5 342 aa9.04□□□□□ -0.96
PDLIM5-223ENST00000627587 ZNF385BQ569K4 471 aa9.04□□□□□ -0.96
PDLIM5-223ENST00000627587 SAMD4BQ5PRF9 694 aaKnown RBP9.04□□□□□ -0.96
PDLIM5-223ENST00000627587 FCRL6Q6DN72 434 aa9.04□□□□□ -0.96
PDLIM5-223ENST00000627587 ANKRD26P1Q6NSI1 321 aa9.04□□□□□ -0.96
PDLIM5-223ENST00000627587 NANOGP8Q6NSW7 305 aa9.04□□□□□ -0.96
PDLIM5-223ENST00000627587 TMEM26Q6ZUK4 368 aa9.04□□□□□ -0.96
PDLIM5-223ENST00000627587 PAGE2Q7Z2X7 111 aa9.04□□□□□ -0.96
PDLIM5-223ENST00000627587 ZNF438Q7Z4V0 828 aa9.04□□□□□ -0.96
PDLIM5-223ENST00000627587 DHDDSQ86SQ9 333 aa9.04□□□□□ -0.96
PDLIM5-223ENST00000627587 GPR180Q86V85 440 aa9.04□□□□□ -0.96
PDLIM5-223ENST00000627587 MMP21Q8N119 569 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms