RNA–Protein interactions for RNA: ENST00000625849.2

TCF4-250, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-250ENST00000625849 SCAMP5Q8TAC9 235 aa3.14□□□□□ -1.91
TCF4-250ENST00000625849 SCFD2Q8WU76 684 aa3.14□□□□□ -1.91
TCF4-250ENST00000625849 PDCD6IPQ8WUM4 868 aaKnown RBP3.14□□□□□ -1.91
TCF4-250ENST00000625849 POF1BQ8WVV4 589 aa3.14□□□□□ -1.91
TCF4-250ENST00000625849 SH3KBP1Q96B97 665 aa3.14□□□□□ -1.91
TCF4-250ENST00000625849 B3GALT6Q96L58 329 aa3.14□□□□□ -1.91
TCF4-250ENST00000625849 FAM20AQ96MK3 541 aa3.14□□□□□ -1.91
TCF4-250ENST00000625849 TSGA13Q96PP4 275 aa3.14□□□□□ -1.91
TCF4-250ENST00000625849 MCRIP2Q9BUT9 160 aaKnown RBP3.14□□□□□ -1.91
TCF4-250ENST00000625849 YTHDF1Q9BYJ9 559 aaKnown RBP3.14□□□□□ -1.91
TCF4-250ENST00000625849 PITPNM3Q9BZ71 974 aa3.14□□□□□ -1.91
TCF4-250ENST00000625849 CCSER1Q9C0I3 900 aa3.14□□□□□ -1.91
TCF4-250ENST00000625849 HOXD1Q9GZZ0 328 aa3.14□□□□□ -1.91
TCF4-250ENST00000625849 ZMYND12Q9H0C1 365 aa3.14□□□□□ -1.91
TCF4-250ENST00000625849 LMAN2LQ9H0V9 348 aa3.14□□□□□ -1.91
TCF4-250ENST00000625849 TMEM245Q9H330 911 aa3.14□□□□□ -1.91
TCF4-250ENST00000625849 GOLPH3Q9H4A6 298 aa3.14□□□□□ -1.91
TCF4-250ENST00000625849 STN1Q9H668 368 aaKnown RBP3.14□□□□□ -1.91
TCF4-250ENST00000625849 FANCFQ9NPI8 374 aa3.14□□□□□ -1.91
TCF4-250ENST00000625849 ZC4H2Q9NQZ6 224 aa3.14□□□□□ -1.91
TCF4-250ENST00000625849 OLFML3Q9NRN5 406 aa3.14□□□□□ -1.91
TCF4-250ENST00000625849 MRGBPQ9NV56 204 aa3.14□□□□□ -1.91
TCF4-250ENST00000625849 DDX18Q9NVP1 670 aaKnown RBP3.14□□□□□ -1.91
TCF4-250ENST00000625849 GDAP2Q9NXN4 497 aa3.14□□□□□ -1.91
TCF4-250ENST00000625849 NYAP2Q9P242 653 aa3.14□□□□□ -1.91
TCF4-250ENST00000625849 NDRG3Q9UGV2 375 aa3.14□□□□□ -1.91
TCF4-250ENST00000625849 RWDD2AQ9UIY3 292 aa3.14□□□□□ -1.91
TCF4-250ENST00000625849 CAB39Q9Y376 341 aaPredicted RBP3.14□□□□□ -1.91
TCF4-250ENST00000625849 CBY1Q9Y3M2 126 aa3.14□□□□□ -1.91
TCF4-250ENST00000625849 UGT2A1Q9Y4X1 527 aa3.14□□□□□ -1.91
TCF4-250ENST00000625849 CPQQ9Y646 472 aa3.14□□□□□ -1.91
TCF4-250ENST00000625849 NUP153P49790 1475 aaKnown RBP3.14□□□□□ -1.91
TCF4-250ENST00000625849 STK36Q9NRP7 1315 aa3.14□□□□□ -1.91
TCF4-250ENST00000625849 PCM1Q15154 2024 aa3.14□□□□□ -1.91
TCF4-250ENST00000625849 METP08581 1390 aa3.13□□□□□ -1.91
TCF4-250ENST00000625849 SPATA31D1Q6ZQQ2 1576 aa3.13□□□□□ -1.91
TCF4-250ENST00000625849 LAMB4A4D0S4 1761 aa3.13□□□□□ -1.91
TCF4-250ENST00000625849 ATRNO75882 1429 aa3.13□□□□□ -1.91
TCF4-250ENST00000625849 A0A087WXM4 84 aa3.13□□□□□ -1.91
TCF4-250ENST00000625849 TUBAL3A6NHL2 446 aa3.13□□□□□ -1.91
TCF4-250ENST00000625849 TCP11X1B4DZS4 312 aa3.13□□□□□ -1.91
TCF4-250ENST00000625849 CLDN25C9JDP6 229 aa3.13□□□□□ -1.91
TCF4-250ENST00000625849 H7C0C1 242 aa3.13□□□□□ -1.91
TCF4-250ENST00000625849 WRBO00258 174 aa3.13□□□□□ -1.91
TCF4-250ENST00000625849 TAF4O00268 1085 aa3.13□□□□□ -1.91
TCF4-250ENST00000625849 LAD1O00515 517 aa3.13□□□□□ -1.91
TCF4-250ENST00000625849 RAD51BO15315 384 aa3.13□□□□□ -1.91
TCF4-250ENST00000625849 HDAC3O15379 428 aa3.13□□□□□ -1.91
TCF4-250ENST00000625849 RAD51CO43502 376 aa3.13□□□□□ -1.91
TCF4-250ENST00000625849 FAM189A1O60320 539 aa3.13□□□□□ -1.91
TCF4-250ENST00000625849 DFNA5O60443 496 aa3.13□□□□□ -1.91
TCF4-250ENST00000625849 EDF1O60869 148 aaKnown RBP3.13□□□□□ -1.91
TCF4-250ENST00000625849 NOS1APO75052 506 aaPredicted RBP3.13□□□□□ -1.91
TCF4-250ENST00000625849 PTP4A3O75365 173 aa3.13□□□□□ -1.91
TCF4-250ENST00000625849 TRIM3O75382 744 aaPredicted RBP3.13□□□□□ -1.91
TCF4-250ENST00000625849 SNAPC5O75971 98 aa3.13□□□□□ -1.91
TCF4-250ENST00000625849 NDUFB4O95168 129 aa3.13□□□□□ -1.91
TCF4-250ENST00000625849 APBB3O95704 486 aa3.13□□□□□ -1.91
TCF4-250ENST00000625849 POP4O95707 220 aaKnown RBP3.13□□□□□ -1.91
TCF4-250ENST00000625849 PTTG1O95997 202 aa3.13□□□□□ -1.91
TCF4-250ENST00000625849 KRT8P05787 483 aa3.13□□□□□ -1.91
TCF4-250ENST00000625849 ERVK-10P10266 1014 aa3.13□□□□□ -1.91
TCF4-250ENST00000625849 GATA2P23769 480 aaPredicted RBP3.13□□□□□ -1.91
TCF4-250ENST00000625849 RRM1P23921 792 aa3.13□□□□□ -1.91
TCF4-250ENST00000625849 CHMP24386 653 aa3.13□□□□□ -1.91
TCF4-250ENST00000625849 DCKP27707 260 aa3.13□□□□□ -1.91
TCF4-250ENST00000625849 CST5P28325 142 aaPredicted RBP3.13□□□□□ -1.91
TCF4-250ENST00000625849 CD40LGP29965 261 aa3.13□□□□□ -1.91
TCF4-250ENST00000625849 SHMT1P34896 483 aa3.13□□□□□ -1.91
TCF4-250ENST00000625849 PNPLA4P41247 253 aa3.13□□□□□ -1.91
TCF4-250ENST00000625849 NAMPTP43490 491 aa3.13□□□□□ -1.91
TCF4-250ENST00000625849 TRAPPC10P48553 1259 aa3.13□□□□□ -1.91
TCF4-250ENST00000625849 ARSFP54793 590 aa3.13□□□□□ -1.91
TCF4-250ENST00000625849 TMBIM6P55061 237 aa3.13□□□□□ -1.91
TCF4-250ENST00000625849 BPIFB3P59826 476 aa3.13□□□□□ -1.91
TCF4-250ENST00000625849 UBE2IP63279 158 aaKnown RBP3.13□□□□□ -1.91
TCF4-250ENST00000625849 FLI1Q01543 452 aaPredicted RBP3.13□□□□□ -1.91
TCF4-250ENST00000625849 CAV1Q03135 178 aa3.13□□□□□ -1.91
TCF4-250ENST00000625849 KDSRQ06136 332 aa3.13□□□□□ -1.91
TCF4-250ENST00000625849 CDK10Q15131 360 aa3.13□□□□□ -1.91
TCF4-250ENST00000625849 SMAD1Q15797 465 aaKnown RBP3.13□□□□□ -1.91
TCF4-250ENST00000625849 PDK4Q16654 411 aa3.13□□□□□ -1.91
TCF4-250ENST00000625849 MAPK6Q16659 721 aa3.13□□□□□ -1.91
TCF4-250ENST00000625849 SMU1Q2TAY7 513 aa3.13□□□□□ -1.91
TCF4-250ENST00000625849 AP5B1Q2VPB7 878 aa3.13□□□□□ -1.91
TCF4-250ENST00000625849 ESCO2Q56NI9 601 aa3.13□□□□□ -1.91
TCF4-250ENST00000625849 TCP11X2Q5H9J9 407 aa3.13□□□□□ -1.91
TCF4-250ENST00000625849 ZDHHC20Q5W0Z9 365 aa3.13□□□□□ -1.91
TCF4-250ENST00000625849 FAM205BPQ63HN1 556 aa3.13□□□□□ -1.91
TCF4-250ENST00000625849 ZNF544Q6NX49 715 aa3.13□□□□□ -1.91
TCF4-250ENST00000625849 ZNF790Q6PG37 636 aa3.13□□□□□ -1.91
TCF4-250ENST00000625849 UNC5DQ6UXZ4 953 aa3.13□□□□□ -1.91
TCF4-250ENST00000625849 PLEKHG7Q6ZR37 379 aa3.13□□□□□ -1.91
TCF4-250ENST00000625849 BTN2A1Q7KYR7 527 aa3.13□□□□□ -1.91
TCF4-250ENST00000625849 SLFN11Q7Z7L1 901 aa3.13□□□□□ -1.91
TCF4-250ENST00000625849 PLCZ1Q86YW0 608 aa3.13□□□□□ -1.91
TCF4-250ENST00000625849 CTAGE3PQ8IX95 158 aa3.13□□□□□ -1.91
TCF4-250ENST00000625849 RNF113BQ8IZP6 322 aaKnown RBP3.13□□□□□ -1.91
TCF4-250ENST00000625849 FAM9CQ8IZT9 166 aa3.13□□□□□ -1.91
TCF4-250ENST00000625849 SNX31Q8N9S9 440 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms