RNA–Protein interactions for RNA: ENST00000625423.2

VARS2-213, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,362 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-213ENST00000625423 C1GALT1C1LP0DN25 315 aa10.77□□□□□ -0.68
VARS2-213ENST00000625423 PTX3P26022 381 aaPredicted RBP10.77□□□□□ -0.68
VARS2-213ENST00000625423 XCR1P46094 333 aa10.77□□□□□ -0.68
VARS2-213ENST00000625423 PTGES3Q15185 160 aaKnown RBP10.77□□□□□ -0.68
VARS2-213ENST00000625423 TPRG1LQ5T0D9 272 aa10.77□□□□□ -0.68
VARS2-213ENST00000625423 TRIM40Q6P9F5 258 aa10.77□□□□□ -0.68
VARS2-213ENST00000625423 REM2Q8IYK8 340 aaPredicted RBP10.77□□□□□ -0.68
VARS2-213ENST00000625423 ZNF740Q8NDX6 193 aa10.77□□□□□ -0.68
VARS2-213ENST00000625423 GEMIN6Q8WXD5 167 aaKnown RBP10.77□□□□□ -0.68
VARS2-213ENST00000625423 ABHD8Q96I13 439 aa10.77□□□□□ -0.68
VARS2-213ENST00000625423 MRGPRX3Q96LB0 322 aa10.77□□□□□ -0.68
VARS2-213ENST00000625423 PIP5K1AQ99755 562 aa10.77□□□□□ -0.68
VARS2-213ENST00000625423 TAS2R9Q9NYW1 312 aa10.77□□□□□ -0.68
VARS2-213ENST00000625423 IL36AQ9UHA7 158 aa10.77□□□□□ -0.68
VARS2-213ENST00000625423 CFAP20Q9Y6A4 193 aaKnown RBP10.77□□□□□ -0.68
VARS2-213ENST00000625423 TAF4O00268 1085 aa10.77□□□□□ -0.69
VARS2-213ENST00000625423 FOXE1O00358 373 aaPredicted RBP10.77□□□□□ -0.69
VARS2-213ENST00000625423 GADD45GO95257 159 aa10.77□□□□□ -0.69
VARS2-213ENST00000625423 ADRA2AP08913 450 aa10.77□□□□□ -0.69
VARS2-213ENST00000625423 MAGP20916 626 aa10.77□□□□□ -0.69
VARS2-213ENST00000625423 GTF2E2P29084 291 aaKnown RBP10.77□□□□□ -0.69
VARS2-213ENST00000625423 SERPINB1P30740 379 aa10.77□□□□□ -0.69
VARS2-213ENST00000625423 RGS6P49758 472 aa10.77□□□□□ -0.69
VARS2-213ENST00000625423 PDE7AQ13946 482 aa10.77□□□□□ -0.69
VARS2-213ENST00000625423 CRB2Q5IJ48 1285 aa10.77□□□□□ -0.69
VARS2-213ENST00000625423 FAM71E1Q6IPT2 247 aa10.77□□□□□ -0.69
VARS2-213ENST00000625423 CCDC80Q76M96 950 aa10.77□□□□□ -0.69
VARS2-213ENST00000625423 DPPA4Q7L190 304 aa10.77□□□□□ -0.69
VARS2-213ENST00000625423 LACC1Q8IV20 430 aa10.77□□□□□ -0.69
VARS2-213ENST00000625423 POC5Q8NA72 575 aa10.77□□□□□ -0.69
VARS2-213ENST00000625423 KREMEN2Q8NCW0 462 aa10.77□□□□□ -0.69
VARS2-213ENST00000625423 Q96MT0 163 aa10.77□□□□□ -0.69
VARS2-213ENST00000625423 RAD9AQ99638 391 aa10.77□□□□□ -0.69
VARS2-213ENST00000625423 SORBS1Q9BX66 1292 aaKnown RBP10.77□□□□□ -0.69
VARS2-213ENST00000625423 MIR1-1HGQ9H1L0 117 aa10.77□□□□□ -0.69
VARS2-213ENST00000625423 QPCTLQ9NXS2 382 aa10.77□□□□□ -0.69
VARS2-213ENST00000625423 NFKBIL1Q9UBC1 381 aaPredicted RBP10.77□□□□□ -0.69
VARS2-213ENST00000625423 HCN4Q9Y3Q4 1203 aa10.77□□□□□ -0.69
VARS2-213ENST00000625423 FAM32AQ9Y421 112 aaKnown RBP10.77□□□□□ -0.69
VARS2-213ENST00000625423 PCDHGA3Q9Y5H0 932 aa10.77□□□□□ -0.69
VARS2-213ENST00000625423 DOCK6Q96HP0 2047 aa10.77□□□□□ -0.69
VARS2-213ENST00000625423 A0A1W2PRB8 838 aa10.77□□□□□ -0.69
VARS2-213ENST00000625423 SYN1P17600 705 aa10.77□□□□□ -0.69
VARS2-213ENST00000625423 DMC1Q14565 340 aa10.77□□□□□ -0.69
VARS2-213ENST00000625423 TEAD2Q15562 447 aa10.77□□□□□ -0.69
VARS2-213ENST00000625423 CARTPTQ16568 116 aa10.77□□□□□ -0.69
VARS2-213ENST00000625423 TRIM60Q495X7 471 aa10.77□□□□□ -0.69
VARS2-213ENST00000625423 FBXO43Q4G163 708 aa10.77□□□□□ -0.69
VARS2-213ENST00000625423 ZNF805Q5CZA5 627 aa10.77□□□□□ -0.69
VARS2-213ENST00000625423 LILRA6Q6PI73 481 aa10.77□□□□□ -0.69
VARS2-213ENST00000625423 LAS2Q8IYD9 372 aa10.77□□□□□ -0.69
VARS2-213ENST00000625423 AQP11Q8NBQ7 271 aa10.77□□□□□ -0.69
VARS2-213ENST00000625423 OR5M11Q96RB7 305 aa10.77□□□□□ -0.69
VARS2-213ENST00000625423 EFCAB11Q9BUY7 163 aa10.77□□□□□ -0.69
VARS2-213ENST00000625423 ZBP1Q9H171 429 aa10.77□□□□□ -0.69
VARS2-213ENST00000625423 TMEM39AQ9NV64 488 aa10.77□□□□□ -0.69
VARS2-213ENST00000625423 ANKMY1Q9P2S6 941 aa10.77□□□□□ -0.69
VARS2-213ENST00000625423 OGDHLQ9ULD0 1010 aa10.77□□□□□ -0.69
VARS2-213ENST00000625423 IFT52Q9Y366 437 aa10.77□□□□□ -0.69
VARS2-213ENST00000625423 TRBC2A0A5B9 178 aa10.76□□□□□ -0.69
VARS2-213ENST00000625423 CCNB2O95067 398 aa10.76□□□□□ -0.69
VARS2-213ENST00000625423 GASTP01350 101 aa10.76□□□□□ -0.69
VARS2-213ENST00000625423 DNTTP04053 509 aa10.76□□□□□ -0.69
VARS2-213ENST00000625423 IL3P08700 152 aa10.76□□□□□ -0.69
VARS2-213ENST00000625423 CCL5P13501 91 aa10.76□□□□□ -0.69
VARS2-213ENST00000625423 POU1F1P28069 291 aa10.76□□□□□ -0.69
VARS2-213ENST00000625423 MMP12P39900 470 aa10.76□□□□□ -0.69
VARS2-213ENST00000625423 NNMTP40261 264 aa10.76□□□□□ -0.69
VARS2-213ENST00000625423 PNLIPRP1P54315 467 aa10.76□□□□□ -0.69
VARS2-213ENST00000625423 ZNF630Q2M218 657 aaPredicted RBP10.76□□□□□ -0.69
VARS2-213ENST00000625423 ZNF181Q2M3W8 571 aa10.76□□□□□ -0.69
VARS2-213ENST00000625423 HIST2H2AA3Q6FI13 130 aa10.76□□□□□ -0.69
VARS2-213ENST00000625423 CCDC149Q6ZUS6 474 aa10.76□□□□□ -0.69
VARS2-213ENST00000625423 NLRP8Q86W28 1048 aa10.76□□□□□ -0.69
VARS2-213ENST00000625423 TRAPPC5Q8IUR0 188 aa10.76□□□□□ -0.69
VARS2-213ENST00000625423 KBTBD8Q8NFY9 601 aa10.76□□□□□ -0.69
VARS2-213ENST00000625423 OR2AG1Q9H205 316 aa10.76□□□□□ -0.69
VARS2-213ENST00000625423 SP140LQ9H930 580 aa10.76□□□□□ -0.69
VARS2-213ENST00000625423 SNX8Q9Y5X2 465 aa10.76□□□□□ -0.69
VARS2-213ENST00000625423 TSPAN11A1L157 253 aa10.76□□□□□ -0.69
VARS2-213ENST00000625423 ISPDA4D126 451 aa10.76□□□□□ -0.69
VARS2-213ENST00000625423 FAM227AF5H4B4 570 aa10.76□□□□□ -0.69
VARS2-213ENST00000625423 FGF18O76093 207 aa10.76□□□□□ -0.69
VARS2-213ENST00000625423 IFNA14P01570 189 aa10.76□□□□□ -0.69
VARS2-213ENST00000625423 S100A5P33763 92 aa10.76□□□□□ -0.69
VARS2-213ENST00000625423 LIMS1P48059 325 aa10.76□□□□□ -0.69
VARS2-213ENST00000625423 TPTEP56180 551 aa10.76□□□□□ -0.69
VARS2-213ENST00000625423 CDC42P60953 191 aa10.76□□□□□ -0.69
VARS2-213ENST00000625423 ELOAQ14241 798 aaKnown RBP10.76□□□□□ -0.69
VARS2-213ENST00000625423 IRF3Q14653 427 aa10.76□□□□□ -0.69
VARS2-213ENST00000625423 MED22Q15528 200 aa10.76□□□□□ -0.69
VARS2-213ENST00000625423 DUSP7Q16829 419 aa10.76□□□□□ -0.69
VARS2-213ENST00000625423 TUBA3EQ6PEY2 450 aa10.76□□□□□ -0.69
VARS2-213ENST00000625423 C2orf73Q8N5S3 287 aaPredicted RBP10.76□□□□□ -0.69
VARS2-213ENST00000625423 PARP16Q8N5Y8 322 aa10.76□□□□□ -0.69
VARS2-213ENST00000625423 SLC5A11Q8WWX8 675 aa10.76□□□□□ -0.69
VARS2-213ENST00000625423 SLC6A16Q9GZN6 736 aa10.76□□□□□ -0.69
VARS2-213ENST00000625423 NXF2Q9GZY0 626 aaKnown RBP10.76□□□□□ -0.69
VARS2-213ENST00000625423 MYNNQ9NPC7 610 aa10.76□□□□□ -0.69
VARS2-213ENST00000625423 SAGE2PA6NJ88 616 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms