RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 IGKV1-8A0A0C4DH67 115 aa18.81■□□□□ 0.6
PCDHB11-202ENST00000624887 KRT75O95678 551 aa18.81■□□□□ 0.6
PCDHB11-202ENST00000624887 CASP9P55211 416 aa18.81■□□□□ 0.6
PCDHB11-202ENST00000624887 TPD52P55327 224 aaPredicted RBP18.81■□□□□ 0.6
PCDHB11-202ENST00000624887 EEF1A2Q05639 463 aaKnown RBP18.81■□□□□ 0.6
PCDHB11-202ENST00000624887 IL18R1Q13478 541 aa18.81■□□□□ 0.6
PCDHB11-202ENST00000624887 HEPACAMQ14CZ8 416 aa18.81■□□□□ 0.6
PCDHB11-202ENST00000624887 UAP1L1Q3KQV9 507 aa18.81■□□□□ 0.6
PCDHB11-202ENST00000624887 ZNF691Q5VV52 312 aa18.81■□□□□ 0.6
PCDHB11-202ENST00000624887 KDM4DQ6B0I6 523 aa18.81■□□□□ 0.6
PCDHB11-202ENST00000624887 RNF130Q86XS8 419 aa18.81■□□□□ 0.6
PCDHB11-202ENST00000624887 PIK3C3Q8NEB9 887 aa18.81■□□□□ 0.6
PCDHB11-202ENST00000624887 OR5AK3PQ8NH89 298 aa18.81■□□□□ 0.6
PCDHB11-202ENST00000624887 RGMAQ96B86 450 aa18.81■□□□□ 0.6
PCDHB11-202ENST00000624887 MPP4Q96JB8 637 aa18.81■□□□□ 0.6
PCDHB11-202ENST00000624887 MSLNLQ96KJ4 702 aa18.81■□□□□ 0.6
PCDHB11-202ENST00000624887 SAMHD1Q9Y3Z3 626 aaKnown RBP18.81■□□□□ 0.6
PCDHB11-202ENST00000624887 UNC80Q8N2C7 3258 aa18.8■□□□□ 0.6
PCDHB11-202ENST00000624887 F5P12259 2224 aa18.8■□□□□ 0.6
PCDHB11-202ENST00000624887 OR52A4PA6NMU1 304 aa18.8■□□□□ 0.6
PCDHB11-202ENST00000624887 ANHXE9PGG2 379 aa18.8■□□□□ 0.6
PCDHB11-202ENST00000624887 SLC31A1O15431 190 aa18.8■□□□□ 0.6
PCDHB11-202ENST00000624887 NDUFS4O43181 175 aa18.8■□□□□ 0.6
PCDHB11-202ENST00000624887 LCMT2O60294 686 aaKnown RBP18.8■□□□□ 0.6
PCDHB11-202ENST00000624887 UQCRC2P22695 453 aa18.8■□□□□ 0.6
PCDHB11-202ENST00000624887 SLC5A2P31639 672 aa18.8■□□□□ 0.6
PCDHB11-202ENST00000624887 GSTM5P46439 218 aa18.8■□□□□ 0.6
PCDHB11-202ENST00000624887 PRIM2P49643 509 aa18.8■□□□□ 0.6
PCDHB11-202ENST00000624887 DAPP51397 102 aa18.8■□□□□ 0.6
PCDHB11-202ENST00000624887 SCARB2Q14108 478 aa18.8■□□□□ 0.6
PCDHB11-202ENST00000624887 KRT33BQ14525 404 aa18.8■□□□□ 0.6
PCDHB11-202ENST00000624887 ZNF773Q6PK81 442 aa18.8■□□□□ 0.6
PCDHB11-202ENST00000624887 CCDC80Q76M96 950 aa18.8■□□□□ 0.6
PCDHB11-202ENST00000624887 NUDT13Q86X67 352 aa18.8■□□□□ 0.6
PCDHB11-202ENST00000624887 CHDHQ8NE62 594 aaPredicted RBP18.8■□□□□ 0.6
PCDHB11-202ENST00000624887 ASB12Q8WXK4 309 aa18.8■□□□□ 0.6
PCDHB11-202ENST00000624887 EPS8L2Q9H6S3 715 aa18.8■□□□□ 0.6
PCDHB11-202ENST00000624887 REEP1Q9H902 201 aa18.8■□□□□ 0.6
PCDHB11-202ENST00000624887 ADAM29Q9UKF5 820 aa18.8■□□□□ 0.6
PCDHB11-202ENST00000624887 MAP4K5Q9Y4K4 846 aa18.8■□□□□ 0.6
PCDHB11-202ENST00000624887 PDZK1P1A8MUH7 402 aa18.79■□□□□ 0.6
PCDHB11-202ENST00000624887 B4GAT1O43505 415 aa18.79■□□□□ 0.6
PCDHB11-202ENST00000624887 CLEC3AO75596 197 aa18.79■□□□□ 0.6
PCDHB11-202ENST00000624887 CRHBPP24387 322 aa18.79■□□□□ 0.6
PCDHB11-202ENST00000624887 SOAT1P35610 550 aa18.79■□□□□ 0.6
PCDHB11-202ENST00000624887 POLR2IP36954 125 aaKnown RBP18.79■□□□□ 0.6
PCDHB11-202ENST00000624887 RXRGP48443 463 aa18.79■□□□□ 0.6
PCDHB11-202ENST00000624887 ISL1P61371 349 aa18.79■□□□□ 0.6
PCDHB11-202ENST00000624887 PPP2CBP62714 309 aa18.79■□□□□ 0.6
PCDHB11-202ENST00000624887 PPP2CAP67775 309 aa18.79■□□□□ 0.6
PCDHB11-202ENST00000624887 LAPTM4AQ15012 233 aa18.79■□□□□ 0.6
PCDHB11-202ENST00000624887 ZNF630Q2M218 657 aaPredicted RBP18.79■□□□□ 0.6
PCDHB11-202ENST00000624887 C6orf141Q5SZD1 244 aa18.79■□□□□ 0.6
PCDHB11-202ENST00000624887 KCTD8Q6ZWB6 473 aa18.79■□□□□ 0.6
PCDHB11-202ENST00000624887 OR52E1Q8NGJ3 308 aa18.79■□□□□ 0.6
PCDHB11-202ENST00000624887 MYOCQ99972 504 aa18.79■□□□□ 0.6
PCDHB11-202ENST00000624887 MITFO75030 526 aaPredicted RBP18.79■□□□□ 0.6
PCDHB11-202ENST00000624887 DDX5P17844 614 aaKnown RBP18.79■□□□□ 0.6
PCDHB11-202ENST00000624887 TTKP33981 857 aa18.79■□□□□ 0.6
PCDHB11-202ENST00000624887 RYKP34925 604 aa18.79■□□□□ 0.6
PCDHB11-202ENST00000624887 CD47Q08722 323 aa18.79■□□□□ 0.6
PCDHB11-202ENST00000624887 ARHGAP22Q7Z5H3 698 aa18.79■□□□□ 0.6
PCDHB11-202ENST00000624887 ADCK2Q7Z695 626 aa18.79■□□□□ 0.6
PCDHB11-202ENST00000624887 UBE3DQ7Z6J8 389 aa18.79■□□□□ 0.6
PCDHB11-202ENST00000624887 TTLQ8NG68 377 aa18.79■□□□□ 0.6
PCDHB11-202ENST00000624887 NFKBIDQ8NI38 313 aa18.79■□□□□ 0.6
PCDHB11-202ENST00000624887 CREB3L4Q8TEY5 395 aa18.79■□□□□ 0.6
PCDHB11-202ENST00000624887 OR5P2Q8WZ92 322 aa18.79■□□□□ 0.6
PCDHB11-202ENST00000624887 SIPA1Q96FS4 1042 aa18.79■□□□□ 0.6
PCDHB11-202ENST00000624887 ZNF764Q96H86 408 aaPredicted RBP18.79■□□□□ 0.6
PCDHB11-202ENST00000624887 CXorf36Q9H7Y0 433 aa18.79■□□□□ 0.6
PCDHB11-202ENST00000624887 POLR1BQ9H9Y6 1135 aa18.79■□□□□ 0.6
PCDHB11-202ENST00000624887 FGF22Q9HCT0 170 aa18.79■□□□□ 0.6
PCDHB11-202ENST00000624887 PRDM8Q9NQV8 689 aa18.79■□□□□ 0.6
PCDHB11-202ENST00000624887 THUMPD1Q9NXG2 353 aaKnown RBP18.79■□□□□ 0.6
PCDHB11-202ENST00000624887 PDP1Q9P0J1 537 aaPredicted RBP18.79■□□□□ 0.6
PCDHB11-202ENST00000624887 TRBC2A0A5B9 178 aa18.78■□□□□ 0.6
PCDHB11-202ENST00000624887 BCKDKO14874 412 aa18.78■□□□□ 0.6
PCDHB11-202ENST00000624887 PRICKLE3O43900 615 aaPredicted RBP18.78■□□□□ 0.6
PCDHB11-202ENST00000624887 TMPRSS11DO60235 418 aa18.78■□□□□ 0.6
PCDHB11-202ENST00000624887 UGT2B11O75310 529 aa18.78■□□□□ 0.6
PCDHB11-202ENST00000624887 JRKO75564 520 aa18.78■□□□□ 0.6
PCDHB11-202ENST00000624887 HOXC4P09017 264 aaPredicted RBP18.78■□□□□ 0.6
PCDHB11-202ENST00000624887 ARAFP10398 606 aa18.78■□□□□ 0.6
PCDHB11-202ENST00000624887 IL7RP16871 459 aa18.78■□□□□ 0.6
PCDHB11-202ENST00000624887 EEF1B2P24534 225 aaKnown RBP18.78■□□□□ 0.6
PCDHB11-202ENST00000624887 CDK6Q00534 326 aa18.78■□□□□ 0.6
PCDHB11-202ENST00000624887 PMS2P3Q13401 168 aa18.78■□□□□ 0.6
PCDHB11-202ENST00000624887 RPE65Q16518 533 aa18.78■□□□□ 0.6
PCDHB11-202ENST00000624887 MEP1AQ16819 746 aa18.78■□□□□ 0.6
PCDHB11-202ENST00000624887 CTU2Q2VPK5 515 aaKnown RBP18.78■□□□□ 0.6
PCDHB11-202ENST00000624887 USP30Q70CQ3 517 aa18.78■□□□□ 0.6
PCDHB11-202ENST00000624887 GALNT5Q7Z7M9 940 aa18.78■□□□□ 0.6
PCDHB11-202ENST00000624887 PLD3Q8IV08 490 aa18.78■□□□□ 0.6
PCDHB11-202ENST00000624887 EPYCQ99645 322 aa18.78■□□□□ 0.6
PCDHB11-202ENST00000624887 TMEM121BQ9BXQ6 578 aaPredicted RBP18.78■□□□□ 0.6
PCDHB11-202ENST00000624887 NLNQ9BYT8 704 aa18.78■□□□□ 0.6
PCDHB11-202ENST00000624887 ADNPQ9H2P0 1102 aa18.78■□□□□ 0.6
PCDHB11-202ENST00000624887 DDX31Q9H8H2 851 aaKnown RBP18.78■□□□□ 0.6
PCDHB11-202ENST00000624887 SLAMF7Q9NQ25 335 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms