RNA–Protein interactions for RNA: ENST00000622183.1

CPNE3-213, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 156 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-213ENST00000622183 GMPPAQ96IJ6 420 aaPredicted RBP4.26□□□□□ -1.73
CPNE3-213ENST00000622183 FAM218AQ96MZ4 157 aa4.26□□□□□ -1.73
CPNE3-213ENST00000622183 S1PR3Q99500 378 aa4.26□□□□□ -1.73
CPNE3-213ENST00000622183 SSX3Q99909 188 aa4.26□□□□□ -1.73
CPNE3-213ENST00000622183 ZNF577Q9BSK1 485 aa4.26□□□□□ -1.73
CPNE3-213ENST00000622183 FSD1Q9BTV5 496 aa4.26□□□□□ -1.73
CPNE3-213ENST00000622183 FNDC4Q9H6D8 234 aaPredicted RBP4.26□□□□□ -1.73
CPNE3-213ENST00000622183 ZNF665Q9H7R5 613 aa4.26□□□□□ -1.73
CPNE3-213ENST00000622183 GPN1Q9HCN4 374 aaPredicted RBP4.26□□□□□ -1.73
CPNE3-213ENST00000622183 NINJ2Q9NZG7 142 aa4.26□□□□□ -1.73
CPNE3-213ENST00000622183 ZNF319Q9P2F9 582 aa4.26□□□□□ -1.73
CPNE3-213ENST00000622183 KCNN3Q9UGI6 736 aa4.26□□□□□ -1.73
CPNE3-213ENST00000622183 HOOK1Q9UJC3 728 aaKnown RBP4.26□□□□□ -1.73
CPNE3-213ENST00000622183 CCPG1Q9ULG6 757 aa4.26□□□□□ -1.73
CPNE3-213ENST00000622183 SPATA31D1Q6ZQQ2 1576 aa4.26□□□□□ -1.73
CPNE3-213ENST00000622183 MACROD2A1Z1Q3 448 aa4.25□□□□□ -1.73
CPNE3-213ENST00000622183 CCDC69A6NI79 296 aa4.25□□□□□ -1.73
CPNE3-213ENST00000622183 LMO7DNF2Z398 122 aa4.25□□□□□ -1.73
CPNE3-213ENST00000622183 LRCH4O75427 683 aa4.25□□□□□ -1.73
CPNE3-213ENST00000622183 STAM2O75886 525 aa4.25□□□□□ -1.73
CPNE3-213ENST00000622183 CPNE6O95741 557 aa4.25□□□□□ -1.73
CPNE3-213ENST00000622183 SFTPBP07988 381 aa4.25□□□□□ -1.73
CPNE3-213ENST00000622183 CT45A8P0DMV1 189 aa4.25□□□□□ -1.73
CPNE3-213ENST00000622183 CT45A9P0DMV2 189 aa4.25□□□□□ -1.73
CPNE3-213ENST00000622183 MYOGP15173 224 aa4.25□□□□□ -1.73
CPNE3-213ENST00000622183 B4GALT1P15291 398 aa4.25□□□□□ -1.73
CPNE3-213ENST00000622183 ACP1P24666 158 aa4.25□□□□□ -1.73
CPNE3-213ENST00000622183 SFNP31947 248 aa4.25□□□□□ -1.73
CPNE3-213ENST00000622183 STIP1P31948 543 aaKnown RBP4.25□□□□□ -1.73
CPNE3-213ENST00000622183 FEN1P39748 380 aaKnown RBP4.25□□□□□ -1.73
CPNE3-213ENST00000622183 NSFP46459 744 aaKnown RBP4.25□□□□□ -1.73
CPNE3-213ENST00000622183 ATXN3P54252 364 aaPredicted RBP4.25□□□□□ -1.73
CPNE3-213ENST00000622183 SCN5AQ14524 2016 aa4.25□□□□□ -1.73
CPNE3-213ENST00000622183 CT45A2Q5DJT8 189 aa4.25□□□□□ -1.73
CPNE3-213ENST00000622183 PRAMEF7Q5VXH5 474 aa4.25□□□□□ -1.73
CPNE3-213ENST00000622183 MFSD7Q6UXD7 560 aa4.25□□□□□ -1.73
CPNE3-213ENST00000622183 TMEM64Q6YI46 380 aa4.25□□□□□ -1.73
CPNE3-213ENST00000622183 Q6ZSR9 355 aa4.25□□□□□ -1.73
CPNE3-213ENST00000622183 ADAMTSL2Q86TH1 951 aa4.25□□□□□ -1.73
CPNE3-213ENST00000622183 CUZD1Q86UP6 607 aa4.25□□□□□ -1.73
CPNE3-213ENST00000622183 DND1Q8IYX4 353 aaKnown RBP4.25□□□□□ -1.73
CPNE3-213ENST00000622183 SLC22A15Q8IZD6 547 aa4.25□□□□□ -1.73
CPNE3-213ENST00000622183 CCNYQ8ND76 341 aa4.25□□□□□ -1.73
CPNE3-213ENST00000622183 MRGPRDQ8TDS7 321 aa4.25□□□□□ -1.73
CPNE3-213ENST00000622183 SMPDL3AQ92484 453 aa4.25□□□□□ -1.73
CPNE3-213ENST00000622183 GLYATL1Q969I3 302 aa4.25□□□□□ -1.73
CPNE3-213ENST00000622183 MAGED4Q96JG8 741 aa4.25□□□□□ -1.73
CPNE3-213ENST00000622183 LRR1Q96L50 414 aa4.25□□□□□ -1.73
CPNE3-213ENST00000622183 DDX47Q9H0S4 455 aaKnown RBP4.25□□□□□ -1.73
CPNE3-213ENST00000622183 HSD3B7Q9H2F3 369 aa4.25□□□□□ -1.73
CPNE3-213ENST00000622183 DPEP3Q9H4B8 488 aa4.25□□□□□ -1.73
CPNE3-213ENST00000622183 DCLRE1BQ9H816 532 aa4.25□□□□□ -1.73
CPNE3-213ENST00000622183 MARCH7Q9H992 704 aa4.25□□□□□ -1.73
CPNE3-213ENST00000622183 ACOXLQ9NUZ1 547 aa4.25□□□□□ -1.73
CPNE3-213ENST00000622183 WWOXQ9NZC7 414 aa4.25□□□□□ -1.73
CPNE3-213ENST00000622183 DNPEPQ9ULA0 475 aa4.25□□□□□ -1.73
CPNE3-213ENST00000622183 PPP1R3CQ9UQK1 317 aa4.25□□□□□ -1.73
CPNE3-213ENST00000622183 MRPS2Q9Y399 296 aaKnown RBP4.25□□□□□ -1.73
CPNE3-213ENST00000622183 LRP12Q9Y561 859 aa4.25□□□□□ -1.73
CPNE3-213ENST00000622183 ANGPTL3Q9Y5C1 460 aa4.25□□□□□ -1.73
CPNE3-213ENST00000622183 GREB1LQ9C091 1923 aaPredicted RBP4.25□□□□□ -1.73
CPNE3-213ENST00000622183 MEIOCA2RUB1 952 aa4.24□□□□□ -1.73
CPNE3-213ENST00000622183 KRTAP29-1A8MX34 341 aaPredicted RBP4.24□□□□□ -1.73
CPNE3-213ENST00000622183 GMNNO75496 209 aa4.24□□□□□ -1.73
CPNE3-213ENST00000622183 REC8O95072 547 aa4.24□□□□□ -1.73
CPNE3-213ENST00000622183 FGF19O95750 216 aa4.24□□□□□ -1.73
CPNE3-213ENST00000622183 AMBPP02760 352 aa4.24□□□□□ -1.73
CPNE3-213ENST00000622183 CXCL10P02778 98 aa4.24□□□□□ -1.73
CPNE3-213ENST00000622183 SERPINF2P08697 491 aa4.24□□□□□ -1.73
CPNE3-213ENST00000622183 CCDC192P0DO97 292 aa4.24□□□□□ -1.73
CPNE3-213ENST00000622183 C4BPBP20851 252 aa4.24□□□□□ -1.73
CPNE3-213ENST00000622183 CD86P42081 329 aa4.24□□□□□ -1.73
CPNE3-213ENST00000622183 TSFMP43897 325 aaKnown RBP4.24□□□□□ -1.73
CPNE3-213ENST00000622183 SNRPD1P62314 119 aaKnown RBP4.24□□□□□ -1.73
CPNE3-213ENST00000622183 BTG1P62324 171 aa4.24□□□□□ -1.73
CPNE3-213ENST00000622183 IRX4P78413 519 aa4.24□□□□□ -1.73
CPNE3-213ENST00000622183 MFGE8Q08431 387 aaPredicted RBP4.24□□□□□ -1.73
CPNE3-213ENST00000622183 KRT31Q15323 416 aa4.24□□□□□ -1.73
CPNE3-213ENST00000622183 C3AR1Q16581 482 aa4.24□□□□□ -1.73
CPNE3-213ENST00000622183 SGSM1Q2NKQ1 1148 aa4.24□□□□□ -1.73
CPNE3-213ENST00000622183 TTC31Q49AM3 519 aaPredicted RBP4.24□□□□□ -1.73
CPNE3-213ENST00000622183 ADAMTSL4-AS1Q5T5F5 129 aa4.24□□□□□ -1.73
CPNE3-213ENST00000622183 PWWP2BQ6NUJ5 590 aa4.24□□□□□ -1.73
CPNE3-213ENST00000622183 Q6ZVQ6 151 aa4.24□□□□□ -1.73
CPNE3-213ENST00000622183 ELMOD2Q8IZ81 293 aa4.24□□□□□ -1.73
CPNE3-213ENST00000622183 CNNM3Q8NE01 707 aa4.24□□□□□ -1.73
CPNE3-213ENST00000622183 DDHD1Q8NEL9 900 aa4.24□□□□□ -1.73
CPNE3-213ENST00000622183 FAM111AQ96PZ2 611 aa4.24□□□□□ -1.73
CPNE3-213ENST00000622183 PAPOLGQ9BWT3 736 aaKnown RBP4.24□□□□□ -1.73
CPNE3-213ENST00000622183 HOXD1Q9GZZ0 328 aa4.24□□□□□ -1.73
CPNE3-213ENST00000622183 TRPV6Q9H1D0 765 aa4.24□□□□□ -1.73
CPNE3-213ENST00000622183 MTHFD2LQ9H903 347 aaPredicted RBP4.24□□□□□ -1.73
CPNE3-213ENST00000622183 C3orf14Q9HBI5 128 aa4.24□□□□□ -1.73
CPNE3-213ENST00000622183 S100A14Q9HCY8 104 aa4.24□□□□□ -1.73
CPNE3-213ENST00000622183 ATAD3AQ9NVI7 634 aa4.24□□□□□ -1.73
CPNE3-213ENST00000622183 PLEK2Q9NYT0 353 aa4.24□□□□□ -1.73
CPNE3-213ENST00000622183 PLCL2Q9UPR0 1127 aa4.24□□□□□ -1.73
CPNE3-213ENST00000622183 PYGO1Q9Y3Y4 419 aa4.24□□□□□ -1.73
CPNE3-213ENST00000622183 CFAP73A6NFT4 308 aa4.23□□□□□ -1.73
CPNE3-213ENST00000622183 GLTPD2A6NH11 291 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms