RNA–Protein interactions for RNA: ENST00000622020.4

NPHP4-211, Transcript of nephrocystin 4, humanhuman

TSL 5 BASIC

Gene NPHP4, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-211ENST00000622020 SMURF1Q9HCE7 757 aa15.1■□□□□ 0.01
NPHP4-211ENST00000622020 C5AR2Q9P296 337 aa15.1■□□□□ 0.01
NPHP4-211ENST00000622020 CFAP97Q9P2B7 532 aa15.1■□□□□ 0.01
NPHP4-211ENST00000622020 TRBV4-1A0A0J9YWV2 114 aa15.09■□□□□ 0.01
NPHP4-211ENST00000622020 TMEM88BA6NKF7 163 aa15.09■□□□□ 0.01
NPHP4-211ENST00000622020 GFYI3L273 518 aa15.09■□□□□ 0.01
NPHP4-211ENST00000622020 SRCP12931 536 aa15.09■□□□□ 0.01
NPHP4-211ENST00000622020 PRPH2P23942 346 aa15.09■□□□□ 0.01
NPHP4-211ENST00000622020 HOXD11P31277 338 aaPredicted RBP15.09■□□□□ 0.01
NPHP4-211ENST00000622020 PCGF2P35227 344 aa15.09■□□□□ 0.01
NPHP4-211ENST00000622020 CTSCP53634 463 aa15.09■□□□□ 0.01
NPHP4-211ENST00000622020 CAMK2BQ13554 666 aa15.09■□□□□ 0.01
NPHP4-211ENST00000622020 GPR162Q16538 588 aa15.09■□□□□ 0.01
NPHP4-211ENST00000622020 PRSS53Q2L4Q9 553 aa15.09■□□□□ 0.01
NPHP4-211ENST00000622020 TMIGD1Q6UXZ0 262 aa15.09■□□□□ 0.01
NPHP4-211ENST00000622020 SZRD1Q7Z422 152 aa15.09■□□□□ 0.01
NPHP4-211ENST00000622020 RBM45Q8IUH3 476 aaKnown RBP15.09■□□□□ 0.01
NPHP4-211ENST00000622020 OR4C15Q8NGM1 316 aa15.09■□□□□ 0.01
NPHP4-211ENST00000622020 RAB8BQ92930 207 aa15.09■□□□□ 0.01
NPHP4-211ENST00000622020 TMEM246Q9BRR3 403 aa15.09■□□□□ 0.01
NPHP4-211ENST00000622020 ACAT2Q9BWD1 397 aa15.09■□□□□ 0.01
NPHP4-211ENST00000622020 LINC00597Q9H2U6 94 aa15.09■□□□□ 0.01
NPHP4-211ENST00000622020 ABCB9Q9NP78 766 aa15.09■□□□□ 0.01
NPHP4-211ENST00000622020 SPATA6Q9NWH7 488 aaPredicted RBP15.09■□□□□ 0.01
NPHP4-211ENST00000622020 FKBP14Q9NWM8 211 aa15.09■□□□□ 0.01
NPHP4-211ENST00000622020 CCDC59Q9P031 241 aaKnown RBP15.09■□□□□ 0.01
NPHP4-211ENST00000622020 NUFIP1Q9UHK0 495 aaKnown RBP15.09■□□□□ 0.01
NPHP4-211ENST00000622020 CFL2Q9Y281 166 aa15.09■□□□□ 0.01
NPHP4-211ENST00000622020 CENPXA8MT69 81 aa15.09■□□□□ 0.01
NPHP4-211ENST00000622020 MRPS14O60783 128 aaKnown RBP15.09■□□□□ 0.01
NPHP4-211ENST00000622020 SNX4O95219 450 aa15.09■□□□□ 0.01
NPHP4-211ENST00000622020 RPLP2P05387 115 aaKnown RBP15.09■□□□□ 0.01
NPHP4-211ENST00000622020 ZNF8P17098 575 aaPredicted RBP15.09■□□□□ 0.01
NPHP4-211ENST00000622020 TAS2R50P59544 299 aa15.09■□□□□ 0.01
NPHP4-211ENST00000622020 CD83Q01151 205 aa15.09■□□□□ 0.01
NPHP4-211ENST00000622020 CLPPQ16740 277 aaPredicted RBP15.09■□□□□ 0.01
NPHP4-211ENST00000622020 FBXO43Q4G163 708 aa15.09■□□□□ 0.01
NPHP4-211ENST00000622020 SMUG1Q53HV7 270 aa15.09■□□□□ 0.01
NPHP4-211ENST00000622020 SNAP47Q5SQN1 464 aa15.09■□□□□ 0.01
NPHP4-211ENST00000622020 ZNF366Q8N895 744 aa15.09■□□□□ 0.01
NPHP4-211ENST00000622020 PCSK9Q8NBP7 692 aaKnown RBP15.09■□□□□ 0.01
NPHP4-211ENST00000622020 ZNF740Q8NDX6 193 aa15.09■□□□□ 0.01
NPHP4-211ENST00000622020 DENND6BQ8NEG7 585 aa15.09■□□□□ 0.01
NPHP4-211ENST00000622020 CLP1Q92989 425 aaKnown RBP15.09■□□□□ 0.01
NPHP4-211ENST00000622020 OTUB1Q96FW1 271 aaPredicted RBP15.09■□□□□ 0.01
NPHP4-211ENST00000622020 NRTNQ99748 197 aa15.09■□□□□ 0.01
NPHP4-211ENST00000622020 CLN6Q9NWW5 311 aa15.09■□□□□ 0.01
NPHP4-211ENST00000622020 STOX2Q9P2F5 926 aaPredicted RBP15.09■□□□□ 0.01
NPHP4-211ENST00000622020 MALT1Q9UDY8 824 aa15.09■□□□□ 0.01
NPHP4-211ENST00000622020 HCN4Q9Y3Q4 1203 aa15.09■□□□□ 0.01
NPHP4-211ENST00000622020 A0A1W2PQ09 198 aa15.09■□□□□ 0.01
NPHP4-211ENST00000622020 HOXC11O43248 304 aaPredicted RBP15.09■□□□□ 0.01
NPHP4-211ENST00000622020 ARHGEF15O94989 841 aa15.09■□□□□ 0.01
NPHP4-211ENST00000622020 SEMA3DO95025 777 aa15.09■□□□□ 0.01
NPHP4-211ENST00000622020 KLK1P06870 262 aa15.09■□□□□ 0.01
NPHP4-211ENST00000622020 TNNI3P19429 210 aa15.09■□□□□ 0.01
NPHP4-211ENST00000622020 SPINT3P49223 89 aa15.09■□□□□ 0.01
NPHP4-211ENST00000622020 CAV3P56539 151 aa15.09■□□□□ 0.01
NPHP4-211ENST00000622020 FKBP1BP68106 108 aa15.09■□□□□ 0.01
NPHP4-211ENST00000622020 OLR1P78380 273 aa15.09■□□□□ 0.01
NPHP4-211ENST00000622020 TMPRSS11AQ6ZMR5 421 aa15.09■□□□□ 0.01
NPHP4-211ENST00000622020 CAMKK1Q8N5S9 505 aa15.09■□□□□ 0.01
NPHP4-211ENST00000622020 ZNF461Q8TAF7 563 aa15.09■□□□□ 0.01
NPHP4-211ENST00000622020 COQ8BQ96D53 544 aa15.09■□□□□ 0.01
NPHP4-211ENST00000622020 OPALINQ96PE5 141 aa15.09■□□□□ 0.01
NPHP4-211ENST00000622020 PHOX2BQ99453 314 aa15.09■□□□□ 0.01
NPHP4-211ENST00000622020 HHATLQ9HCP6 504 aa15.09■□□□□ 0.01
NPHP4-211ENST00000622020 YARS2Q9Y2Z4 477 aaKnown RBP15.09■□□□□ 0.01
NPHP4-211ENST00000622020 CKAP5Q14008 2032 aa15.08■□□□□ 0.01
NPHP4-211ENST00000622020 PLD2O14939 933 aa15.08■□□□□ 0
NPHP4-211ENST00000622020 SLITRK5O94991 958 aa15.08■□□□□ 0
NPHP4-211ENST00000622020 WEE1P30291 646 aa15.08■□□□□ 0
NPHP4-211ENST00000622020 RFX2P48378 723 aa15.08■□□□□ 0
NPHP4-211ENST00000622020 TEAD4Q15561 434 aa15.08■□□□□ 0
NPHP4-211ENST00000622020 MPEG1Q2M385 716 aa15.08■□□□□ 0
NPHP4-211ENST00000622020 LIPJQ5W064 366 aa15.08■□□□□ 0
NPHP4-211ENST00000622020 PLAG1Q6DJT9 500 aa15.08■□□□□ 0
NPHP4-211ENST00000622020 FRMPD2BQ6IN97 320 aa15.08■□□□□ 0
NPHP4-211ENST00000622020 SLC8B1Q6J4K2 584 aa15.08■□□□□ 0
NPHP4-211ENST00000622020 ZNF544Q6NX49 715 aa15.08■□□□□ 0
NPHP4-211ENST00000622020 METTL2BQ6P1Q9 378 aaKnown RBP15.08■□□□□ 0
NPHP4-211ENST00000622020 HSD11B1LQ7Z5J1 315 aa15.08■□□□□ 0
NPHP4-211ENST00000622020 GALNT12Q8IXK2 581 aa15.08■□□□□ 0
NPHP4-211ENST00000622020 UBQLNLQ8IYU4 475 aa15.08■□□□□ 0
NPHP4-211ENST00000622020 ASZ1Q8WWH4 475 aa15.08■□□□□ 0
NPHP4-211ENST00000622020 POP5Q969H6 163 aaKnown RBP15.08■□□□□ 0
NPHP4-211ENST00000622020 TP53INP1Q96A56 240 aa15.08■□□□□ 0
NPHP4-211ENST00000622020 POLR2J2Q9GZM3 115 aaKnown RBP15.08■□□□□ 0
NPHP4-211ENST00000622020 MOV10Q9HCE1 1003 aaKnown RBP15.08■□□□□ 0
NPHP4-211ENST00000622020 RANGRFQ9HD47 186 aaPredicted RBP15.08■□□□□ 0
NPHP4-211ENST00000622020 MYO7AQ13402 2215 aa15.08■□□□□ 0
NPHP4-211ENST00000622020 AGAP14A8MT82 685 aa15.08■□□□□ 0
NPHP4-211ENST00000622020 NRG2O14511 850 aaPredicted RBP15.08■□□□□ 0
NPHP4-211ENST00000622020 OR10H3O60404 316 aa15.08■□□□□ 0
NPHP4-211ENST00000622020 AP2A2O94973 939 aa15.08■□□□□ 0
NPHP4-211ENST00000622020 CYP17A1P05093 508 aa15.08■□□□□ 0
NPHP4-211ENST00000622020 CRISP1P54107 249 aa15.08■□□□□ 0
NPHP4-211ENST00000622020 ATN1P54259 1190 aaPredicted RBP15.08■□□□□ 0
NPHP4-211ENST00000622020 LSM11P83369 360 aaKnown RBP eCLIP15.08■□□□□ 0
NPHP4-211ENST00000622020 VEPH1Q14D04 833 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms