RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 GLRA4Q5JXX5 417 aa3.45□□□□□ -1.86
BRCA1-229ENST00000621897 CTR9Q6PD62 1173 aa3.45□□□□□ -1.86
BRCA1-229ENST00000621897 RGS9BPQ6ZS82 235 aa3.45□□□□□ -1.86
BRCA1-229ENST00000621897 C15orf52Q6ZUT6 534 aaKnown RBP3.45□□□□□ -1.86
BRCA1-229ENST00000621897 DET1Q7L5Y6 550 aa3.45□□□□□ -1.86
BRCA1-229ENST00000621897 RABEPKQ7Z6M1 372 aa3.45□□□□□ -1.86
BRCA1-229ENST00000621897 SLC25A42Q86VD7 318 aa3.45□□□□□ -1.86
BRCA1-229ENST00000621897 IQCHQ86VS3 1027 aa3.45□□□□□ -1.86
BRCA1-229ENST00000621897 ZNF584Q8IVC4 421 aa3.45□□□□□ -1.86
BRCA1-229ENST00000621897 RCOR2Q8IZ40 523 aa3.45□□□□□ -1.86
BRCA1-229ENST00000621897 GPC2Q8N158 579 aa3.45□□□□□ -1.86
BRCA1-229ENST00000621897 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.45□□□□□ -1.86
BRCA1-229ENST00000621897 MRPL43Q8N983 215 aaKnown RBP3.45□□□□□ -1.86
BRCA1-229ENST00000621897 POGLUT1Q8NBL1 392 aa3.45□□□□□ -1.86
BRCA1-229ENST00000621897 CCDC148Q8NFR7 591 aa3.45□□□□□ -1.86
BRCA1-229ENST00000621897 ZPLD1Q8TCW7 415 aa3.45□□□□□ -1.86
BRCA1-229ENST00000621897 NPRL2Q8WTW4 380 aa3.45□□□□□ -1.86
BRCA1-229ENST00000621897 RMDN1Q96DB5 314 aa3.45□□□□□ -1.86
BRCA1-229ENST00000621897 SIPA1Q96FS4 1042 aa3.45□□□□□ -1.86
BRCA1-229ENST00000621897 COG3Q96JB2 828 aa3.45□□□□□ -1.86
BRCA1-229ENST00000621897 TXN2Q99757 166 aa3.45□□□□□ -1.86
BRCA1-229ENST00000621897 HSD3B7Q9H2F3 369 aa3.45□□□□□ -1.86
BRCA1-229ENST00000621897 GPN1Q9HCN4 374 aaPredicted RBP3.45□□□□□ -1.86
BRCA1-229ENST00000621897 TM9SF3Q9HD45 589 aa3.45□□□□□ -1.86
BRCA1-229ENST00000621897 ANO10Q9NW15 660 aa3.45□□□□□ -1.86
BRCA1-229ENST00000621897 IL19Q9UHD0 177 aa3.45□□□□□ -1.86
BRCA1-229ENST00000621897 BAIAP2L1Q9UHR4 511 aa3.45□□□□□ -1.86
BRCA1-229ENST00000621897 PIN4Q9Y237 131 aaKnown RBP3.45□□□□□ -1.86
BRCA1-229ENST00000621897 TMED5Q9Y3A6 229 aa3.45□□□□□ -1.86
BRCA1-229ENST00000621897 MRPL11Q9Y3B7 192 aaKnown RBP3.45□□□□□ -1.86
BRCA1-229ENST00000621897 STYXL1Q9Y6J8 313 aa3.45□□□□□ -1.86
BRCA1-229ENST00000621897 PRRC2AP48634 2157 aaKnown RBP3.45□□□□□ -1.86
BRCA1-229ENST00000621897 NSD2O96028 1365 aa3.44□□□□□ -1.86
BRCA1-229ENST00000621897 TRAV24A0A0B4J272 114 aa3.44□□□□□ -1.86
BRCA1-229ENST00000621897 TRBC2A0A5B9 178 aa3.44□□□□□ -1.86
BRCA1-229ENST00000621897 A8MU10 97 aa3.44□□□□□ -1.86
BRCA1-229ENST00000621897 ZNF263O14978 683 aa3.44□□□□□ -1.86
BRCA1-229ENST00000621897 SURF4O15260 269 aa3.44□□□□□ -1.86
BRCA1-229ENST00000621897 PEX11AO75192 247 aa3.44□□□□□ -1.86
BRCA1-229ENST00000621897 GGPS1O95749 300 aa3.44□□□□□ -1.86
BRCA1-229ENST00000621897 OR52Z1P0C646 297 aa3.44□□□□□ -1.86
BRCA1-229ENST00000621897 PDHBP11177 359 aa3.44□□□□□ -1.86
BRCA1-229ENST00000621897 MYOGP15173 224 aa3.44□□□□□ -1.86
BRCA1-229ENST00000621897 CD9P21926 228 aa3.44□□□□□ -1.86
BRCA1-229ENST00000621897 ACAA2P42765 397 aaKnown RBP3.44□□□□□ -1.86
BRCA1-229ENST00000621897 CAPZA2P47755 286 aa3.44□□□□□ -1.86
BRCA1-229ENST00000621897 ATP5OP48047 213 aa3.44□□□□□ -1.86
BRCA1-229ENST00000621897 GMFBP60983 142 aa3.44□□□□□ -1.86
BRCA1-229ENST00000621897 MECOMQ03112 1051 aa3.44□□□□□ -1.86
BRCA1-229ENST00000621897 FCHO2Q0JRZ9 810 aa3.44□□□□□ -1.86
BRCA1-229ENST00000621897 INAQ16352 499 aa3.44□□□□□ -1.86
BRCA1-229ENST00000621897 C15orf32Q32M92 178 aa3.44□□□□□ -1.86
BRCA1-229ENST00000621897 MS4A18Q3C1V0 323 aa3.44□□□□□ -1.86
BRCA1-229ENST00000621897 CCDC40Q4G0X9 1142 aa3.44□□□□□ -1.86
BRCA1-229ENST00000621897 MPP7Q5T2T1 576 aa3.44□□□□□ -1.86
BRCA1-229ENST00000621897 TPGS2Q68CL5 300 aa3.44□□□□□ -1.86
BRCA1-229ENST00000621897 SEL1L3Q68CR1 1132 aa3.44□□□□□ -1.86
BRCA1-229ENST00000621897 TRAT1Q6PIZ9 186 aa3.44□□□□□ -1.86
BRCA1-229ENST00000621897 LINC00696Q6ZRV3 163 aa3.44□□□□□ -1.86
BRCA1-229ENST00000621897 TIPARPQ7Z3E1 657 aaKnown RBP3.44□□□□□ -1.86
BRCA1-229ENST00000621897 TUSC5Q8IXB3 177 aa3.44□□□□□ -1.86
BRCA1-229ENST00000621897 RTL3Q8N8U3 475 aaKnown RBP3.44□□□□□ -1.86
BRCA1-229ENST00000621897 CNNM3Q8NE01 707 aa3.44□□□□□ -1.86
BRCA1-229ENST00000621897 OR10G7Q8NGN6 311 aa3.44□□□□□ -1.86
BRCA1-229ENST00000621897 KIF18AQ8NI77 898 aa3.44□□□□□ -1.86
BRCA1-229ENST00000621897 TOMM40LQ969M1 308 aa3.44□□□□□ -1.86
BRCA1-229ENST00000621897 TEKT1Q969V4 418 aa3.44□□□□□ -1.86
BRCA1-229ENST00000621897 TSACCQ96A04 125 aaPredicted RBP3.44□□□□□ -1.86
BRCA1-229ENST00000621897 KRT23Q9C075 422 aa3.44□□□□□ -1.86
BRCA1-229ENST00000621897 RAVER2Q9HCJ3 691 aaKnown RBP3.44□□□□□ -1.86
BRCA1-229ENST00000621897 IL1RAPL2Q9NP60 686 aa3.44□□□□□ -1.86
BRCA1-229ENST00000621897 PFDN4Q9NQP4 134 aa3.44□□□□□ -1.86
BRCA1-229ENST00000621897 POLE3Q9NRF9 147 aa3.44□□□□□ -1.86
BRCA1-229ENST00000621897 NINJ2Q9NZG7 142 aa3.44□□□□□ -1.86
BRCA1-229ENST00000621897 TBC1D7Q9P0N9 293 aa3.44□□□□□ -1.86
BRCA1-229ENST00000621897 COX16Q9P0S2 106 aa3.44□□□□□ -1.86
BRCA1-229ENST00000621897 TXNDC16Q9P2K2 825 aa3.44□□□□□ -1.86
BRCA1-229ENST00000621897 EXOC7Q9UPT5 735 aa3.44□□□□□ -1.86
BRCA1-229ENST00000621897 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.43□□□□□ -1.86
BRCA1-229ENST00000621897 IGLV4-3A0A075B6K6 122 aa3.43□□□□□ -1.86
BRCA1-229ENST00000621897 LINC00854A0A1B0GVQ3 168 aa3.43□□□□□ -1.86
BRCA1-229ENST00000621897 LRRD1A4D1F6 860 aa3.43□□□□□ -1.86
BRCA1-229ENST00000621897 A4D1N5 150 aa3.43□□□□□ -1.86
BRCA1-229ENST00000621897 MTRF1O75570 445 aaKnown RBP3.43□□□□□ -1.86
BRCA1-229ENST00000621897 SERPING1P05155 500 aa3.43□□□□□ -1.86
BRCA1-229ENST00000621897 RHOXF2BP0C7M4 288 aa3.43□□□□□ -1.86
BRCA1-229ENST00000621897 AOC1P19801 751 aa3.43□□□□□ -1.86
BRCA1-229ENST00000621897 CCNA2P20248 432 aa3.43□□□□□ -1.86
BRCA1-229ENST00000621897 PTAFRP25105 342 aa3.43□□□□□ -1.86
BRCA1-229ENST00000621897 CASP3P42574 277 aa3.43□□□□□ -1.86
BRCA1-229ENST00000621897 MTIF2P46199 727 aaKnown RBP3.43□□□□□ -1.86
BRCA1-229ENST00000621897 ZFP36L2P47974 494 aaKnown RBP3.43□□□□□ -1.86
BRCA1-229ENST00000621897 NT5C2P49902 561 aa3.43□□□□□ -1.86
BRCA1-229ENST00000621897 MEP1BQ16820 701 aa3.43□□□□□ -1.86
BRCA1-229ENST00000621897 MAJINQ3KP22 176 aa3.43□□□□□ -1.86
BRCA1-229ENST00000621897 HSP90AA5PQ58FG0 334 aa3.43□□□□□ -1.86
BRCA1-229ENST00000621897 C9orf152Q5JTZ5 239 aa3.43□□□□□ -1.86
BRCA1-229ENST00000621897 TAF3Q5VWG9 929 aa3.43□□□□□ -1.86
BRCA1-229ENST00000621897 CAVIN1Q6NZI2 390 aaKnown RBP3.43□□□□□ -1.86
BRCA1-229ENST00000621897 CYB5D1Q6P9G0 228 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms