RNA–Protein interactions for RNA: ENST00000621399.1

CIRBP-245, Transcript of cold inducible RNA binding protein, humanhuman

TSL 1 (best)

Gene CIRBP, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-245ENST00000621399 CERS1P27544 350 aa17.55■□□□□ 0.4
CIRBP-245ENST00000621399 FOXA1P55317 472 aa17.55■□□□□ 0.4
CIRBP-245ENST00000621399 RUNX2Q13950 521 aa17.55■□□□□ 0.4
CIRBP-245ENST00000621399 CHI3L2Q15782 390 aa17.55■□□□□ 0.4
CIRBP-245ENST00000621399 MINDY4Q4G0A6 757 aa17.55■□□□□ 0.4
CIRBP-245ENST00000621399 MFSD4BQ5TF39 518 aa17.55■□□□□ 0.4
CIRBP-245ENST00000621399 GPR155Q7Z3F1 870 aa17.55■□□□□ 0.4
CIRBP-245ENST00000621399 LAPTM4BQ86VI4 370 aa17.55■□□□□ 0.4
CIRBP-245ENST00000621399 RAB43Q86YS6 212 aa17.55■□□□□ 0.4
CIRBP-245ENST00000621399 CA13Q8N1Q1 262 aa17.55■□□□□ 0.4
CIRBP-245ENST00000621399 HBEGFQ99075 208 aa17.55■□□□□ 0.4
CIRBP-245ENST00000621399 RBCK1Q9BYM8 510 aa17.55■□□□□ 0.4
CIRBP-245ENST00000621399 BRF2Q9HAW0 419 aa17.55■□□□□ 0.4
CIRBP-245ENST00000621399 TNFRSF12AQ9NP84 129 aa17.55■□□□□ 0.4
CIRBP-245ENST00000621399 NMRK1Q9NWW6 199 aa17.55■□□□□ 0.4
CIRBP-245ENST00000621399 C3orf18Q9UK00 162 aa17.55■□□□□ 0.4
CIRBP-245ENST00000621399 MKL2Q9ULH7 1088 aa17.55■□□□□ 0.4
CIRBP-245ENST00000621399 SLC12A4Q9UP95 1085 aa17.55■□□□□ 0.4
CIRBP-245ENST00000621399 ZFYVE26Q68DK2 2539 aa17.55■□□□□ 0.4
CIRBP-245ENST00000621399 ATRXP46100 2492 aa17.55■□□□□ 0.4
CIRBP-245ENST00000621399 HMGB1P1B2RPK0 211 aaPredicted RBP17.54■□□□□ 0.4
CIRBP-245ENST00000621399 IDSB3KWA1 339 aa17.54■□□□□ 0.4
CIRBP-245ENST00000621399 PLPP1O14494 284 aa17.54■□□□□ 0.4
CIRBP-245ENST00000621399 SERPINE1P05121 402 aa17.54■□□□□ 0.4
CIRBP-245ENST00000621399 CHRNGP07510 517 aa17.54■□□□□ 0.4
CIRBP-245ENST00000621399 HEXBP07686 556 aa17.54■□□□□ 0.4
CIRBP-245ENST00000621399 UROSP10746 265 aa17.54■□□□□ 0.4
CIRBP-245ENST00000621399 RNH1P13489 461 aaKnown RBP17.54■□□□□ 0.4
CIRBP-245ENST00000621399 HIST1H1TP22492 207 aaPredicted RBP17.54■□□□□ 0.4
CIRBP-245ENST00000621399 ATP5A1P25705 553 aaKnown RBP17.54■□□□□ 0.4
CIRBP-245ENST00000621399 SERPINB3P29508 390 aa17.54■□□□□ 0.4
CIRBP-245ENST00000621399 TSFMP43897 325 aaKnown RBP17.54■□□□□ 0.4
CIRBP-245ENST00000621399 HTR6P50406 440 aa17.54■□□□□ 0.4
CIRBP-245ENST00000621399 ARFIP1P53367 373 aa17.54■□□□□ 0.4
CIRBP-245ENST00000621399 EMP2P54851 167 aa17.54■□□□□ 0.4
CIRBP-245ENST00000621399 WDR4P57081 412 aaKnown RBP17.54■□□□□ 0.4
CIRBP-245ENST00000621399 ZNF33BQ06732 778 aa17.54■□□□□ 0.4
CIRBP-245ENST00000621399 GALNT1Q10472 559 aaPredicted RBP17.54■□□□□ 0.4
CIRBP-245ENST00000621399 ABRAXAS2Q15018 415 aa17.54■□□□□ 0.4
CIRBP-245ENST00000621399 ZNF793Q6ZN11 406 aa17.54■□□□□ 0.4
CIRBP-245ENST00000621399 ACOT4Q8N9L9 421 aa17.54■□□□□ 0.4
CIRBP-245ENST00000621399 OR6Y1Q8NGX8 325 aa17.54■□□□□ 0.4
CIRBP-245ENST00000621399 THAP4Q8WY91 577 aa17.54■□□□□ 0.4
CIRBP-245ENST00000621399 TBC1D20Q96BZ9 403 aa17.54■□□□□ 0.4
CIRBP-245ENST00000621399 OR1F2PQ96R84 312 aa17.54■□□□□ 0.4
CIRBP-245ENST00000621399 SORBS1Q9BX66 1292 aaKnown RBP17.54■□□□□ 0.4
CIRBP-245ENST00000621399 SEMA3GQ9NS98 782 aa17.54■□□□□ 0.4
CIRBP-245ENST00000621399 AHSPQ9NZD4 102 aa17.54■□□□□ 0.4
CIRBP-245ENST00000621399 FER1L5A0AVI2 2057 aa17.54■□□□□ 0.4
CIRBP-245ENST00000621399 AZIN1O14977 448 aa17.53■□□□□ 0.4
CIRBP-245ENST00000621399 CDC123O75794 336 aaPredicted RBP17.53■□□□□ 0.4
CIRBP-245ENST00000621399 SEMA3DO95025 777 aa17.53■□□□□ 0.4
CIRBP-245ENST00000621399 IGHEP01854 428 aa17.53■□□□□ 0.4
CIRBP-245ENST00000621399 FHP07954 510 aa17.53■□□□□ 0.4
CIRBP-245ENST00000621399 HSD3B1P14060 373 aa17.53■□□□□ 0.4
CIRBP-245ENST00000621399 MMP11P24347 488 aa17.53■□□□□ 0.4
CIRBP-245ENST00000621399 HSD3B2P26439 372 aa17.53■□□□□ 0.4
CIRBP-245ENST00000621399 CSTF3Q12996 717 aaKnown RBP17.53■□□□□ 0.4
CIRBP-245ENST00000621399 DEFB109BQ30KR1 87 aa17.53■□□□□ 0.4
CIRBP-245ENST00000621399 CLEC6AQ6EIG7 209 aa17.53■□□□□ 0.4
CIRBP-245ENST00000621399 SCIMPQ6UWF3 145 aa17.53■□□□□ 0.4
CIRBP-245ENST00000621399 GBP7Q8N8V2 638 aaPredicted RBP17.53■□□□□ 0.4
CIRBP-245ENST00000621399 ADAMTS17Q8TE56 1095 aa17.53■□□□□ 0.4
CIRBP-245ENST00000621399 CATSPER2Q96P56 530 aa17.53■□□□□ 0.4
CIRBP-245ENST00000621399 MRPL1Q9BYD6 325 aaKnown RBP17.53■□□□□ 0.4
CIRBP-245ENST00000621399 VPS29Q9UBQ0 182 aa17.53■□□□□ 0.4
CIRBP-245ENST00000621399 POLHQ9Y253 713 aa17.53■□□□□ 0.4
CIRBP-245ENST00000621399 FIS1Q9Y3D6 152 aa17.53■□□□□ 0.4
CIRBP-245ENST00000621399 ITPR1Q14643 2758 aa17.53■□□□□ 0.4
CIRBP-245ENST00000621399 TMEM114B3SHH9 223 aa17.52■□□□□ 0.4
CIRBP-245ENST00000621399 FAM227AF5H4B4 570 aa17.52■□□□□ 0.4
CIRBP-245ENST00000621399 PEX12O00623 359 aa17.52■□□□□ 0.4
CIRBP-245ENST00000621399 B4GALT2O60909 372 aa17.52■□□□□ 0.4
CIRBP-245ENST00000621399 SCELO95171 688 aa17.52■□□□□ 0.4
CIRBP-245ENST00000621399 HSPA4LO95757 839 aa17.52■□□□□ 0.4
CIRBP-245ENST00000621399 CHN1P15882 459 aa17.52■□□□□ 0.4
CIRBP-245ENST00000621399 BGNP21810 368 aa17.52■□□□□ 0.4
CIRBP-245ENST00000621399 JAK1P23458 1154 aa17.52■□□□□ 0.4
CIRBP-245ENST00000621399 GRK2P25098 689 aa17.52■□□□□ 0.4
CIRBP-245ENST00000621399 BSGP35613 385 aa17.52■□□□□ 0.4
CIRBP-245ENST00000621399 LIM2P55344 173 aa17.52■□□□□ 0.4
CIRBP-245ENST00000621399 RAB38P57729 211 aa17.52■□□□□ 0.4
CIRBP-245ENST00000621399 SLAMF1Q13291 335 aa17.52■□□□□ 0.4
CIRBP-245ENST00000621399 PPP1R32Q7Z5V6 425 aa17.52■□□□□ 0.4
CIRBP-245ENST00000621399 MRGPREQ86SM8 312 aa17.52■□□□□ 0.4
CIRBP-245ENST00000621399 NUDT13Q86X67 352 aa17.52■□□□□ 0.4
CIRBP-245ENST00000621399 NACC2Q96BF6 587 aa17.52■□□□□ 0.4
CIRBP-245ENST00000621399 IP6K3Q96PC2 410 aa17.52■□□□□ 0.4
CIRBP-245ENST00000621399 VN1R1Q9GZP7 353 aa17.52■□□□□ 0.4
CIRBP-245ENST00000621399 LYRM4Q9HD34 91 aa17.52■□□□□ 0.4
CIRBP-245ENST00000621399 DAPP1Q9UN19 280 aa17.52■□□□□ 0.4
CIRBP-245ENST00000621399 MAN2B2Q9Y2E5 1009 aa17.52■□□□□ 0.4
CIRBP-245ENST00000621399 TRAF6Q9Y4K3 522 aa17.52■□□□□ 0.4
CIRBP-245ENST00000621399 OR2W5A6NFC9 320 aa17.51■□□□□ 0.39
CIRBP-245ENST00000621399 EEDO75530 441 aaKnown RBP17.51■□□□□ 0.39
CIRBP-245ENST00000621399 CHEK2O96017 543 aa17.51■□□□□ 0.39
CIRBP-245ENST00000621399 FGF4P08620 206 aa17.51■□□□□ 0.39
CIRBP-245ENST00000621399 ARRB2P32121 409 aa17.51■□□□□ 0.39
CIRBP-245ENST00000621399 ABCE1P61221 599 aaKnown RBP17.51■□□□□ 0.39
CIRBP-245ENST00000621399 HMGCS1Q01581 520 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms