RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 RASSF1Q9NS23 344 aa11.85□□□□□ -0.51
CIITA-212ENST00000618207 CLDND1Q9NY35 253 aa11.85□□□□□ -0.51
CIITA-212ENST00000618207 TAAR2Q9P1P5 351 aa11.85□□□□□ -0.51
CIITA-212ENST00000618207 RNGTTO60942 597 aaKnown RBP11.85□□□□□ -0.51
CIITA-212ENST00000618207 BMP10O95393 424 aa11.85□□□□□ -0.51
CIITA-212ENST00000618207 KLF8O95600 359 aaPredicted RBP11.85□□□□□ -0.51
CIITA-212ENST00000618207 HOXB2P14652 356 aa11.85□□□□□ -0.51
CIITA-212ENST00000618207 CD72P21854 359 aa11.85□□□□□ -0.51
CIITA-212ENST00000618207 AK4P27144 223 aaPredicted RBP11.85□□□□□ -0.51
CIITA-212ENST00000618207 RRM2P31350 389 aa11.85□□□□□ -0.51
CIITA-212ENST00000618207 RAD23AP54725 363 aa11.85□□□□□ -0.51
CIITA-212ENST00000618207 TUBA4AP68366 448 aa11.85□□□□□ -0.51
CIITA-212ENST00000618207 LRRC74AQ0VAA2 488 aa11.85□□□□□ -0.51
CIITA-212ENST00000618207 ERICH5Q6P6B1 374 aa11.85□□□□□ -0.51
CIITA-212ENST00000618207 Q6ZPB1 254 aaPredicted RBP11.85□□□□□ -0.51
CIITA-212ENST00000618207 FRMD1Q8N878 549 aa11.85□□□□□ -0.51
CIITA-212ENST00000618207 TP53I13Q8NBR0 393 aaPredicted RBP11.85□□□□□ -0.51
CIITA-212ENST00000618207 TMEM145Q8NBT3 493 aa11.85□□□□□ -0.51
CIITA-212ENST00000618207 SETD7Q8WTS6 366 aaKnown RBP11.85□□□□□ -0.51
CIITA-212ENST00000618207 TEX101Q9BY14 249 aa11.85□□□□□ -0.51
CIITA-212ENST00000618207 REEP1Q9H902 201 aa11.85□□□□□ -0.51
CIITA-212ENST00000618207 SLAMF7Q9NQ25 335 aa11.85□□□□□ -0.51
CIITA-212ENST00000618207 SIRT5Q9NXA8 310 aa11.85□□□□□ -0.51
CIITA-212ENST00000618207 TEX10Q9NXF1 929 aaPredicted RBP11.85□□□□□ -0.51
CIITA-212ENST00000618207 THUMPD1Q9NXG2 353 aaKnown RBP11.85□□□□□ -0.51
CIITA-212ENST00000618207 TAS2R9Q9NYW1 312 aa11.85□□□□□ -0.51
CIITA-212ENST00000618207 PTTG2Q9NZH5 202 aa11.85□□□□□ -0.51
CIITA-212ENST00000618207 RAB23Q9ULC3 237 aa11.85□□□□□ -0.51
CIITA-212ENST00000618207 A0A1W2PPV9 198 aa11.84□□□□□ -0.51
CIITA-212ENST00000618207 J3KTA2 159 aa11.84□□□□□ -0.51
CIITA-212ENST00000618207 BCKDKO14874 412 aa11.84□□□□□ -0.51
CIITA-212ENST00000618207 GPR37L1O60883 481 aa11.84□□□□□ -0.51
CIITA-212ENST00000618207 ADH1BP00325 375 aa11.84□□□□□ -0.51
CIITA-212ENST00000618207 EGFP01133 1207 aa11.84□□□□□ -0.51
CIITA-212ENST00000618207 NAT2P11245 290 aa11.84□□□□□ -0.51
CIITA-212ENST00000618207 IGFALSP35858 605 aa11.84□□□□□ -0.51
CIITA-212ENST00000618207 SLC19A1P41440 591 aa11.84□□□□□ -0.51
CIITA-212ENST00000618207 CCR8P51685 355 aa11.84□□□□□ -0.51
CIITA-212ENST00000618207 MVDP53602 400 aa11.84□□□□□ -0.51
CIITA-212ENST00000618207 MANFP55145 182 aaKnown RBP11.84□□□□□ -0.51
CIITA-212ENST00000618207 SCARB2Q14108 478 aa11.84□□□□□ -0.51
CIITA-212ENST00000618207 E2F2Q14209 437 aa11.84□□□□□ -0.51
CIITA-212ENST00000618207 RPS26P11Q5JNZ5 115 aaPredicted RBP11.84□□□□□ -0.51
CIITA-212ENST00000618207 DEPDC1Q5TB30 811 aa11.84□□□□□ -0.51
CIITA-212ENST00000618207 KHDRBS2Q5VWX1 349 aaKnown RBP11.84□□□□□ -0.51
CIITA-212ENST00000618207 OLIG3Q7RTU3 272 aa11.84□□□□□ -0.51
CIITA-212ENST00000618207 HIPK1Q86Z02 1210 aa11.84□□□□□ -0.51
CIITA-212ENST00000618207 LSM14AQ8ND56 463 aaKnown RBP11.84□□□□□ -0.51
CIITA-212ENST00000618207 OR52E4Q8NGH9 312 aa11.84□□□□□ -0.51
CIITA-212ENST00000618207 SMPDL3AQ92484 453 aa11.84□□□□□ -0.51
CIITA-212ENST00000618207 UBE2E3Q969T4 207 aa11.84□□□□□ -0.51
CIITA-212ENST00000618207 WDR34Q96EX3 536 aa11.84□□□□□ -0.51
CIITA-212ENST00000618207 RHNO1Q9BSD3 238 aa11.84□□□□□ -0.51
CIITA-212ENST00000618207 BHLHE41Q9C0J9 482 aaPredicted RBP11.84□□□□□ -0.51
CIITA-212ENST00000618207 EHD1Q9H4M9 534 aa11.84□□□□□ -0.51
CIITA-212ENST00000618207 ADPRHL2Q9NX46 363 aa11.84□□□□□ -0.51
CIITA-212ENST00000618207 ZBTB11O95625 1053 aaPredicted RBP11.84□□□□□ -0.51
CIITA-212ENST00000618207 RPN2P04844 631 aa11.84□□□□□ -0.51
CIITA-212ENST00000618207 CEACAM5P06731 702 aa11.84□□□□□ -0.51
CIITA-212ENST00000618207 POU2F1P14859 743 aa11.84□□□□□ -0.51
CIITA-212ENST00000618207 PIK3CBP42338 1070 aa11.84□□□□□ -0.51
CIITA-212ENST00000618207 RPA4Q13156 261 aa11.84□□□□□ -0.51
CIITA-212ENST00000618207 GANABQ14697 944 aaKnown RBP11.84□□□□□ -0.51
CIITA-212ENST00000618207 SMN1Q16637 294 aaKnown RBP11.84□□□□□ -0.51
CIITA-212ENST00000618207 KIAA1324Q6UXG2 1013 aaKnown RBP11.84□□□□□ -0.51
CIITA-212ENST00000618207 GPR155Q7Z3F1 870 aa11.84□□□□□ -0.51
CIITA-212ENST00000618207 CHDHQ8NE62 594 aaPredicted RBP11.84□□□□□ -0.51
CIITA-212ENST00000618207 CCL4L1Q8NHW4 92 aa11.84□□□□□ -0.51
CIITA-212ENST00000618207 C12orf43Q96C57 262 aaKnown RBP11.84□□□□□ -0.51
CIITA-212ENST00000618207 ISOC1Q96CN7 298 aa11.84□□□□□ -0.51
CIITA-212ENST00000618207 MRPL38Q96DV4 380 aaKnown RBP11.84□□□□□ -0.51
CIITA-212ENST00000618207 CAMK1GQ96NX5 476 aa11.84□□□□□ -0.51
CIITA-212ENST00000618207 MENTQ9BUN1 341 aa11.84□□□□□ -0.51
CIITA-212ENST00000618207 CXorf36Q9H7Y0 433 aa11.84□□□□□ -0.51
CIITA-212ENST00000618207 FGF22Q9HCT0 170 aa11.84□□□□□ -0.51
CIITA-212ENST00000618207 TMEM184CQ9NVA4 438 aa11.84□□□□□ -0.51
CIITA-212ENST00000618207 SCHIP1Q9P0W5 487 aaPredicted RBP11.84□□□□□ -0.51
CIITA-212ENST00000618207 RHCGQ9UBD6 479 aa11.84□□□□□ -0.51
CIITA-212ENST00000618207 ATP6V1HQ9UI12 483 aa11.84□□□□□ -0.51
CIITA-212ENST00000618207 LAMA1P25391 3075 aa11.84□□□□□ -0.51
CIITA-212ENST00000618207 DENND4AQ7Z401 1863 aa11.84□□□□□ -0.51
CIITA-212ENST00000618207 SPTBP11277 2137 aa11.84□□□□□ -0.51
CIITA-212ENST00000618207 TMPRSS11DO60235 418 aa11.83□□□□□ -0.52
CIITA-212ENST00000618207 ADAM23O75077 832 aa11.83□□□□□ -0.52
CIITA-212ENST00000618207 TRIM23P36406 574 aa11.83□□□□□ -0.52
CIITA-212ENST00000618207 MAGEA2P43356 314 aa11.83□□□□□ -0.52
CIITA-212ENST00000618207 ADPRHP54922 357 aa11.83□□□□□ -0.52
CIITA-212ENST00000618207 RPS21P63220 83 aaKnown RBP11.83□□□□□ -0.52
CIITA-212ENST00000618207 KCNJ10P78508 379 aa11.83□□□□□ -0.52
CIITA-212ENST00000618207 PCDH1Q08174 1060 aa11.83□□□□□ -0.52
CIITA-212ENST00000618207 C6orf141Q5SZD1 244 aa11.83□□□□□ -0.52
CIITA-212ENST00000618207 GCNT6Q5T4J0 391 aa11.83□□□□□ -0.52
CIITA-212ENST00000618207 SHQ1Q6PI26 577 aaKnown RBP11.83□□□□□ -0.52
CIITA-212ENST00000618207 DGLUCYQ7Z3D6 616 aa11.83□□□□□ -0.52
CIITA-212ENST00000618207 IL17RCQ8NAC3 791 aa11.83□□□□□ -0.52
CIITA-212ENST00000618207 FCRL4Q96PJ5 515 aa11.83□□□□□ -0.52
CIITA-212ENST00000618207 KLHL31Q9H511 634 aa11.83□□□□□ -0.52
CIITA-212ENST00000618207 TM9SF3Q9HD45 589 aa11.83□□□□□ -0.52
CIITA-212ENST00000618207 MYNNQ9NPC7 610 aa11.83□□□□□ -0.52
CIITA-212ENST00000618207 GALNT8Q9NY28 637 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms