RNA–Protein interactions for RNA: ENST00000617339.4

SHROOM1-208, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHROOM1, Length 3,638 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-208ENST00000617339 CREG1O75629 220 aa13.88□□□□□ -0.19
SHROOM1-208ENST00000617339 C8GP07360 202 aa13.88□□□□□ -0.19
SHROOM1-208ENST00000617339 HSMCR30P0CW71 290 aa13.88□□□□□ -0.19
SHROOM1-208ENST00000617339 ACP5P13686 325 aa13.88□□□□□ -0.19
SHROOM1-208ENST00000617339 ZNF8P17098 575 aaPredicted RBP13.88□□□□□ -0.19
SHROOM1-208ENST00000617339 HTR1EP28566 365 aa13.88□□□□□ -0.19
SHROOM1-208ENST00000617339 TBPL1P62380 186 aa13.88□□□□□ -0.19
SHROOM1-208ENST00000617339 TOP3AQ13472 1001 aaPredicted RBP13.88□□□□□ -0.19
SHROOM1-208ENST00000617339 TP53BP2Q13625 1128 aa13.88□□□□□ -0.19
SHROOM1-208ENST00000617339 SMU1Q2TAY7 513 aa13.88□□□□□ -0.19
SHROOM1-208ENST00000617339 NXNL2Q5VZ03 156 aa13.88□□□□□ -0.19
SHROOM1-208ENST00000617339 LYPD8Q6UX82 237 aa13.88□□□□□ -0.19
SHROOM1-208ENST00000617339 TMEM132CQ8N3T6 1108 aa13.88□□□□□ -0.19
SHROOM1-208ENST00000617339 CPA6Q8N4T0 437 aa13.88□□□□□ -0.19
SHROOM1-208ENST00000617339 GOLM1Q8NBJ4 401 aa13.88□□□□□ -0.19
SHROOM1-208ENST00000617339 PHF10Q8WUB8 498 aaKnown RBP13.88□□□□□ -0.19
SHROOM1-208ENST00000617339 ZNF480Q8WV37 535 aa13.88□□□□□ -0.19
SHROOM1-208ENST00000617339 CIDECQ96AQ7 238 aaPredicted RBP13.88□□□□□ -0.19
SHROOM1-208ENST00000617339 NUS1Q96E22 293 aa13.88□□□□□ -0.19
SHROOM1-208ENST00000617339 ZNF300Q96RE9 604 aaPredicted RBP13.88□□□□□ -0.19
SHROOM1-208ENST00000617339 CCM2Q9BSQ5 444 aa13.88□□□□□ -0.19
SHROOM1-208ENST00000617339 C1QTNF3Q9BXJ4 246 aa13.88□□□□□ -0.19
SHROOM1-208ENST00000617339 SP140LQ9H930 580 aa13.88□□□□□ -0.19
SHROOM1-208ENST00000617339 SGTAO43765 313 aa13.88□□□□□ -0.19
SHROOM1-208ENST00000617339 PON2Q15165 354 aa13.88□□□□□ -0.19
SHROOM1-208ENST00000617339 CEP78Q5JTW2 689 aa13.88□□□□□ -0.19
SHROOM1-208ENST00000617339 FAM217AQ8IXS0 508 aa13.88□□□□□ -0.19
SHROOM1-208ENST00000617339 ZNF707Q96C28 371 aaPredicted RBP13.88□□□□□ -0.19
SHROOM1-208ENST00000617339 COQ7Q99807 217 aa13.88□□□□□ -0.19
SHROOM1-208ENST00000617339 ZSCAN5AQ9BUG6 496 aa13.88□□□□□ -0.19
SHROOM1-208ENST00000617339 NTMT1Q9BV86 223 aa13.88□□□□□ -0.19
SHROOM1-208ENST00000617339 BTBD2Q9BX70 525 aa13.88□□□□□ -0.19
SHROOM1-208ENST00000617339 ROGDIQ9GZN7 287 aa13.88□□□□□ -0.19
SHROOM1-208ENST00000617339 DNAJB9Q9UBS3 223 aa13.88□□□□□ -0.19
SHROOM1-208ENST00000617339 CA5BQ9Y2D0 317 aa13.88□□□□□ -0.19
SHROOM1-208ENST00000617339 MID1O15344 667 aa13.88□□□□□ -0.19
SHROOM1-208ENST00000617339 LINC01565O15544 149 aa13.88□□□□□ -0.19
SHROOM1-208ENST00000617339 AIREO43918 545 aa13.88□□□□□ -0.19
SHROOM1-208ENST00000617339 ENDOUP21128 410 aaKnown RBP13.88□□□□□ -0.19
SHROOM1-208ENST00000617339 AZGP1P25311 298 aaKnown RBP13.88□□□□□ -0.19
SHROOM1-208ENST00000617339 IMPA1P29218 277 aa13.88□□□□□ -0.19
SHROOM1-208ENST00000617339 MAPK9P45984 424 aa13.88□□□□□ -0.19
SHROOM1-208ENST00000617339 GABARAPL2P60520 117 aa13.88□□□□□ -0.19
SHROOM1-208ENST00000617339 METTL3Q86U44 580 aaKnown RBP13.88□□□□□ -0.19
SHROOM1-208ENST00000617339 OR7G3Q8NG95 312 aa13.88□□□□□ -0.19
SHROOM1-208ENST00000617339 RETREG1Q9H6L5 497 aa13.88□□□□□ -0.19
SHROOM1-208ENST00000617339 SLC23A2Q9UGH3 650 aa13.88□□□□□ -0.19
SHROOM1-208ENST00000617339 H7BY64 318 aa13.87□□□□□ -0.19
SHROOM1-208ENST00000617339 KAT7O95251 611 aa13.87□□□□□ -0.19
SHROOM1-208ENST00000617339 IL6P05231 212 aa13.87□□□□□ -0.19
SHROOM1-208ENST00000617339 MAD2L1Q13257 205 aaPredicted RBP13.87□□□□□ -0.19
SHROOM1-208ENST00000617339 FAM83HQ6ZRV2 1179 aaPredicted RBP13.87□□□□□ -0.19
SHROOM1-208ENST00000617339 OLIG3Q7RTU3 272 aa13.87□□□□□ -0.19
SHROOM1-208ENST00000617339 DCP2Q8IU60 420 aaKnown RBP13.87□□□□□ -0.19
SHROOM1-208ENST00000617339 NPAS3Q8IXF0 933 aa13.87□□□□□ -0.19
SHROOM1-208ENST00000617339 WDR48Q8TAF3 677 aa13.87□□□□□ -0.19
SHROOM1-208ENST00000617339 HMGB4Q8WW32 186 aa13.87□□□□□ -0.19
SHROOM1-208ENST00000617339 PRAP1Q96NZ9 151 aa13.87□□□□□ -0.19
SHROOM1-208ENST00000617339 KCNS3Q9BQ31 491 aa13.87□□□□□ -0.19
SHROOM1-208ENST00000617339 UGT2B28Q9BY64 529 aa13.87□□□□□ -0.19
SHROOM1-208ENST00000617339 NUAK2Q9H093 628 aa13.87□□□□□ -0.19
SHROOM1-208ENST00000617339 AASDHPPTQ9NRN7 309 aa13.87□□□□□ -0.19
SHROOM1-208ENST00000617339 TAC3Q9UHF0 121 aa13.87□□□□□ -0.19
SHROOM1-208ENST00000617339 TPRKBQ9Y3C4 175 aa13.87□□□□□ -0.19
SHROOM1-208ENST00000617339 DYRK1BQ9Y463 629 aa13.87□□□□□ -0.19
SHROOM1-208ENST00000617339 GMPPBQ9Y5P6 360 aa13.87□□□□□ -0.19
SHROOM1-208ENST00000617339 RGS10O43665 173 aa13.87□□□□□ -0.19
SHROOM1-208ENST00000617339 ICMTO60725 284 aa13.87□□□□□ -0.19
SHROOM1-208ENST00000617339 IGFBP5P24593 272 aa13.87□□□□□ -0.19
SHROOM1-208ENST00000617339 RFX3P48380 749 aa13.87□□□□□ -0.19
SHROOM1-208ENST00000617339 CSNK1DP48730 415 aa13.87□□□□□ -0.19
SHROOM1-208ENST00000617339 FOXM1Q08050 763 aa13.87□□□□□ -0.19
SHROOM1-208ENST00000617339 ZNF691Q5VV52 312 aa13.87□□□□□ -0.19
SHROOM1-208ENST00000617339 ZNF852Q6ZMS4 543 aa13.87□□□□□ -0.19
SHROOM1-208ENST00000617339 UBE2J2Q8N2K1 259 aa13.87□□□□□ -0.19
SHROOM1-208ENST00000617339 PARP16Q8N5Y8 322 aa13.87□□□□□ -0.19
SHROOM1-208ENST00000617339 YIPF6Q96EC8 236 aa13.87□□□□□ -0.19
SHROOM1-208ENST00000617339 LMLNQ96KR4 655 aa13.87□□□□□ -0.19
SHROOM1-208ENST00000617339 MEN1O00255 615 aa13.87□□□□□ -0.19
SHROOM1-208ENST00000617339 PPM1DO15297 605 aa13.87□□□□□ -0.19
SHROOM1-208ENST00000617339 ZW10O43264 779 aa13.87□□□□□ -0.19
SHROOM1-208ENST00000617339 IFI30P13284 250 aa13.87□□□□□ -0.19
SHROOM1-208ENST00000617339 EPHA2P29317 976 aa13.87□□□□□ -0.19
SHROOM1-208ENST00000617339 CD6P30203 668 aa13.87□□□□□ -0.19
SHROOM1-208ENST00000617339 DCTP40126 519 aa13.87□□□□□ -0.19
SHROOM1-208ENST00000617339 CLCNKAP51800 687 aa13.87□□□□□ -0.19
SHROOM1-208ENST00000617339 PRKAG1P54619 331 aa13.87□□□□□ -0.19
SHROOM1-208ENST00000617339 ERVK-21P61565 698 aa13.87□□□□□ -0.19
SHROOM1-208ENST00000617339 C2orf80Q0P641 193 aa13.87□□□□□ -0.19
SHROOM1-208ENST00000617339 KIAA0040Q15053 153 aa13.87□□□□□ -0.19
SHROOM1-208ENST00000617339 WDR45BQ5MNZ6 344 aa13.87□□□□□ -0.19
SHROOM1-208ENST00000617339 HENMT1Q5T8I9 393 aaKnown RBP13.87□□□□□ -0.19
SHROOM1-208ENST00000617339 ARMC5Q96C12 935 aa13.87□□□□□ -0.19
SHROOM1-208ENST00000617339 Q96MT0 163 aa13.87□□□□□ -0.19
SHROOM1-208ENST00000617339 NECTIN4Q96NY8 510 aa13.87□□□□□ -0.19
SHROOM1-208ENST00000617339 MUC13Q9H3R2 512 aa13.87□□□□□ -0.19
SHROOM1-208ENST00000617339 FBXL12Q9NXK8 326 aa13.87□□□□□ -0.19
SHROOM1-208ENST00000617339 SERGEFQ9UGK8 458 aa13.87□□□□□ -0.19
SHROOM1-208ENST00000617339 FAM172BPA6NC97 362 aa13.86□□□□□ -0.19
SHROOM1-208ENST00000617339 AGAP5A6NIR3 686 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms