RNA–Protein interactions for RNA: ENST00000616710.4

TNFRSF11A-205, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-205ENST00000616710 ZNF655Q8N720 491 aaPredicted RBP13.47□□□□□ -0.25
TNFRSF11A-205ENST00000616710 KIAA1958Q8N8K9 716 aa13.47□□□□□ -0.25
TNFRSF11A-205ENST00000616710 NFKBIDQ8NI38 313 aa13.47□□□□□ -0.25
TNFRSF11A-205ENST00000616710 MRPS31Q92665 395 aaKnown RBP13.47□□□□□ -0.25
TNFRSF11A-205ENST00000616710 ELMOD3Q96FG2 381 aa13.47□□□□□ -0.25
TNFRSF11A-205ENST00000616710 SPATC1LQ9H0A9 340 aa13.47□□□□□ -0.25
TNFRSF11A-205ENST00000616710 TMEM138Q9NPI0 162 aa13.47□□□□□ -0.25
TNFRSF11A-205ENST00000616710 RBFOX1Q9NWB1 397 aaKnown RBP13.47□□□□□ -0.25
TNFRSF11A-205ENST00000616710 HSPE1-MOB4S4R3N1 261 aa13.47□□□□□ -0.25
TNFRSF11A-205ENST00000616710 NHSQ6T4R5 1651 aa13.47□□□□□ -0.25
TNFRSF11A-205ENST00000616710 SCN1AP35498 2009 aa13.47□□□□□ -0.25
TNFRSF11A-205ENST00000616710 A0A1B0GW55 424 aa13.47□□□□□ -0.25
TNFRSF11A-205ENST00000616710 FGF10O15520 208 aaPredicted RBP13.47□□□□□ -0.25
TNFRSF11A-205ENST00000616710 B4GALT3O60512 393 aa13.47□□□□□ -0.25
TNFRSF11A-205ENST00000616710 ALDOBP05062 364 aa13.47□□□□□ -0.25
TNFRSF11A-205ENST00000616710 DUX4L2P0CJ85 424 aa13.47□□□□□ -0.25
TNFRSF11A-205ENST00000616710 DUX4L3P0CJ86 424 aa13.47□□□□□ -0.25
TNFRSF11A-205ENST00000616710 DUX4L4P0CJ87 422 aa13.47□□□□□ -0.25
TNFRSF11A-205ENST00000616710 DUX4L5P0CJ88 424 aa13.47□□□□□ -0.25
TNFRSF11A-205ENST00000616710 DUX4L6P0CJ89 424 aa13.47□□□□□ -0.25
TNFRSF11A-205ENST00000616710 DUX4L7P0CJ90 424 aa13.47□□□□□ -0.25
TNFRSF11A-205ENST00000616710 TGFB3P10600 412 aa13.47□□□□□ -0.25
TNFRSF11A-205ENST00000616710 ETFAP13804 333 aa13.47□□□□□ -0.25
TNFRSF11A-205ENST00000616710 GRIK2Q13002 908 aa13.47□□□□□ -0.25
TNFRSF11A-205ENST00000616710 GRIN2CQ14957 1233 aa13.47□□□□□ -0.25
TNFRSF11A-205ENST00000616710 PLAG1Q6DJT9 500 aa13.47□□□□□ -0.25
TNFRSF11A-205ENST00000616710 TEX261Q6UWH6 196 aa13.47□□□□□ -0.25
TNFRSF11A-205ENST00000616710 RTL3Q8N8U3 475 aaKnown RBP13.47□□□□□ -0.25
TNFRSF11A-205ENST00000616710 UPRTQ96BW1 309 aa13.47□□□□□ -0.25
TNFRSF11A-205ENST00000616710 NTMT1Q9BV86 223 aa13.47□□□□□ -0.25
TNFRSF11A-205ENST00000616710 MRIQ9BWK5 157 aa13.47□□□□□ -0.25
TNFRSF11A-205ENST00000616710 POLR2J3Q9H1A7 115 aaKnown RBP13.47□□□□□ -0.25
TNFRSF11A-205ENST00000616710 ZNF768Q9H5H4 540 aaKnown RBP13.47□□□□□ -0.25
TNFRSF11A-205ENST00000616710 WASH6PQ9NQA3 447 aa13.47□□□□□ -0.25
TNFRSF11A-205ENST00000616710 DUX4Q9UBX2 424 aa13.47□□□□□ -0.25
TNFRSF11A-205ENST00000616710 IL20RAQ9UHF4 553 aa13.47□□□□□ -0.25
TNFRSF11A-205ENST00000616710 STUB1Q9UNE7 303 aa13.47□□□□□ -0.25
TNFRSF11A-205ENST00000616710 ZFR2Q9UPR6 939 aaKnown RBP13.47□□□□□ -0.25
TNFRSF11A-205ENST00000616710 POFUT2Q9Y2G5 429 aa13.47□□□□□ -0.25
TNFRSF11A-205ENST00000616710 U3KQ87 197 aa13.47□□□□□ -0.25
TNFRSF11A-205ENST00000616710 TTC3P53804 2025 aa13.46□□□□□ -0.25
TNFRSF11A-205ENST00000616710 TEX13CA0A0J9YWL9 993 aa13.46□□□□□ -0.25
TNFRSF11A-205ENST00000616710 A0A1W2PQH9 124 aa13.46□□□□□ -0.25
TNFRSF11A-205ENST00000616710 ANKDD1BA6NHY2 528 aa13.46□□□□□ -0.25
TNFRSF11A-205ENST00000616710 MEIS3P2A8K0S8 358 aa13.46□□□□□ -0.25
TNFRSF11A-205ENST00000616710 H7C2Y5 167 aa13.46□□□□□ -0.25
TNFRSF11A-205ENST00000616710 PRRG1O14668 218 aa13.46□□□□□ -0.25
TNFRSF11A-205ENST00000616710 FGF1P05230 155 aa13.46□□□□□ -0.25
TNFRSF11A-205ENST00000616710 LPOP22079 712 aaPredicted RBP13.46□□□□□ -0.25
TNFRSF11A-205ENST00000616710 MAPK1P28482 360 aa13.46□□□□□ -0.25
TNFRSF11A-205ENST00000616710 CAPZA2P47755 286 aa13.46□□□□□ -0.25
TNFRSF11A-205ENST00000616710 TPMTP51580 245 aa13.46□□□□□ -0.25
TNFRSF11A-205ENST00000616710 GRK1Q15835 563 aa13.46□□□□□ -0.25
TNFRSF11A-205ENST00000616710 IFI44LQ53G44 452 aa13.46□□□□□ -0.25
TNFRSF11A-205ENST00000616710 ELP2Q6IA86 826 aa13.46□□□□□ -0.25
TNFRSF11A-205ENST00000616710 TNFAIP8L2Q6P589 184 aaPredicted RBP13.46□□□□□ -0.25
TNFRSF11A-205ENST00000616710 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.46□□□□□ -0.25
TNFRSF11A-205ENST00000616710 SLC30A8Q8IWU4 369 aa13.46□□□□□ -0.25
TNFRSF11A-205ENST00000616710 SDR16C5Q8N3Y7 309 aa13.46□□□□□ -0.25
TNFRSF11A-205ENST00000616710 C9orf43Q8TAL5 461 aaPredicted RBP13.46□□□□□ -0.25
TNFRSF11A-205ENST00000616710 NEIL3Q8TAT5 605 aa13.46□□□□□ -0.25
TNFRSF11A-205ENST00000616710 BTN2A2Q8WVV5 523 aa13.46□□□□□ -0.25
TNFRSF11A-205ENST00000616710 HRASLS5Q96KN8 279 aa13.46□□□□□ -0.25
TNFRSF11A-205ENST00000616710 C11orf84Q9BUA3 381 aaPredicted RBP13.46□□□□□ -0.25
TNFRSF11A-205ENST00000616710 HS3ST4Q9Y661 456 aa13.46□□□□□ -0.25
TNFRSF11A-205ENST00000616710 PDYNP01213 254 aa13.46□□□□□ -0.25
TNFRSF11A-205ENST00000616710 CFL1P23528 166 aaKnown RBP13.46□□□□□ -0.25
TNFRSF11A-205ENST00000616710 LCN1P31025 176 aa13.46□□□□□ -0.25
TNFRSF11A-205ENST00000616710 ETV1P50549 477 aa13.46□□□□□ -0.25
TNFRSF11A-205ENST00000616710 TMEM81Q6P7N7 255 aa13.46□□□□□ -0.25
TNFRSF11A-205ENST00000616710 TRIM40Q6P9F5 258 aa13.46□□□□□ -0.25
TNFRSF11A-205ENST00000616710 VN1R5Q7Z5H4 357 aa13.46□□□□□ -0.25
TNFRSF11A-205ENST00000616710 MSRB3Q8IXL7 192 aa13.46□□□□□ -0.25
TNFRSF11A-205ENST00000616710 FAM9CQ8IZT9 166 aa13.46□□□□□ -0.25
TNFRSF11A-205ENST00000616710 ZNF366Q8N895 744 aa13.46□□□□□ -0.25
TNFRSF11A-205ENST00000616710 TMEM145Q8NBT3 493 aa13.46□□□□□ -0.25
TNFRSF11A-205ENST00000616710 APIPQ96GX9 242 aa13.46□□□□□ -0.25
TNFRSF11A-205ENST00000616710 TMEM80Q96HE8 168 aa13.46□□□□□ -0.25
TNFRSF11A-205ENST00000616710 ZYG11BQ9C0D3 744 aa13.46□□□□□ -0.25
TNFRSF11A-205ENST00000616710 ELAC1Q9H777 363 aaKnown RBP13.46□□□□□ -0.25
TNFRSF11A-205ENST00000616710 CDV3Q9UKY7 258 aaKnown RBP13.46□□□□□ -0.25
TNFRSF11A-205ENST00000616710 PRG3Q9Y2Y8 225 aaPredicted RBP13.46□□□□□ -0.25
TNFRSF11A-205ENST00000616710 CLDN9O95484 217 aa13.46□□□□□ -0.26
TNFRSF11A-205ENST00000616710 GLAP06280 429 aa13.46□□□□□ -0.26
TNFRSF11A-205ENST00000616710 KLHL22Q53GT1 634 aa13.46□□□□□ -0.26
TNFRSF11A-205ENST00000616710 CPTPQ5TA50 214 aa13.46□□□□□ -0.26
TNFRSF11A-205ENST00000616710 MZT2AQ6P582 158 aa13.46□□□□□ -0.26
TNFRSF11A-205ENST00000616710 TMEM65Q6PI78 240 aa13.46□□□□□ -0.26
TNFRSF11A-205ENST00000616710 PRSS42Q7Z5A4 293 aa13.46□□□□□ -0.26
TNFRSF11A-205ENST00000616710 NAGSQ8N159 534 aa13.46□□□□□ -0.26
TNFRSF11A-205ENST00000616710 CHST13Q8NET6 341 aa13.46□□□□□ -0.26
TNFRSF11A-205ENST00000616710 DNAJB8Q8NHS0 232 aa13.46□□□□□ -0.26
TNFRSF11A-205ENST00000616710 ZBED6CLQ96FA7 236 aaPredicted RBP13.46□□□□□ -0.26
TNFRSF11A-205ENST00000616710 GINS4Q9BRT9 223 aa13.46□□□□□ -0.26
TNFRSF11A-205ENST00000616710 TMEM121BQ9BXQ6 578 aaPredicted RBP13.46□□□□□ -0.26
TNFRSF11A-205ENST00000616710 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.46□□□□□ -0.26
TNFRSF11A-205ENST00000616710 C12orf10Q9HB07 376 aa13.46□□□□□ -0.26
TNFRSF11A-205ENST00000616710 TMEM184CQ9NVA4 438 aa13.46□□□□□ -0.26
TNFRSF11A-205ENST00000616710 ITGB4P16144 1822 aa13.46□□□□□ -0.26
TNFRSF11A-205ENST00000616710 A0A0B4J293 547 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms