RNA–Protein interactions for RNA: ENST00000616390.1

CACNA1C-231, Transcript of calcium voltage-gated channel subunit alpha1 C, human

TSL 2 BASIC

Gene CACNA1C, Length 2,833 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1C-231	ENST00000616390	ENPP5	Q9UJA9	477 aa		13.3	□□□□□ -0.28
CACNA1C-231	ENST00000616390	SATB2	Q9UPW6	733 aa		13.3	□□□□□ -0.28
CACNA1C-231	ENST00000616390		A0A0G2JN53	185 aa		13.29	□□□□□ -0.28
CACNA1C-231	ENST00000616390	FEZF1	A0PJY2	475 aa		13.29	□□□□□ -0.28
CACNA1C-231	ENST00000616390	JRK	O75564	520 aa		13.29	□□□□□ -0.28
CACNA1C-231	ENST00000616390	SEMG1	P04279	462 aa		13.29	□□□□□ -0.28
CACNA1C-231	ENST00000616390	BMPR1A	P36894	532 aa		13.29	□□□□□ -0.28
CACNA1C-231	ENST00000616390	EPHA5	P54756	1037 aa		13.29	□□□□□ -0.28
CACNA1C-231	ENST00000616390	ITGA1	P56199	1179 aa		13.29	□□□□□ -0.28
CACNA1C-231	ENST00000616390	DSTN	P60981	165 aa		13.29	□□□□□ -0.28
CACNA1C-231	ENST00000616390	NCS1	P62166	190 aa		13.29	□□□□□ -0.28
CACNA1C-231	ENST00000616390	SLC35A2	P78381	396 aa		13.29	□□□□□ -0.28
CACNA1C-231	ENST00000616390	MVK	Q03426	396 aa		13.29	□□□□□ -0.28
CACNA1C-231	ENST00000616390	IL18R1	Q13478	541 aa		13.29	□□□□□ -0.28
CACNA1C-231	ENST00000616390	VEZF1	Q14119	521 aa		13.29	□□□□□ -0.28
CACNA1C-231	ENST00000616390	CTF1	Q16619	201 aa		13.29	□□□□□ -0.28
CACNA1C-231	ENST00000616390	MPEG1	Q2M385	716 aa		13.29	□□□□□ -0.28
CACNA1C-231	ENST00000616390	ZC3H12B	Q5HYM0	836 aa	Known RBP	13.29	□□□□□ -0.28
CACNA1C-231	ENST00000616390	P3H2	Q8IVL5	708 aa		13.29	□□□□□ -0.28
CACNA1C-231	ENST00000616390	SLC5A8	Q8N695	610 aa		13.29	□□□□□ -0.28
CACNA1C-231	ENST00000616390	ZNF557	Q8N988	423 aa	Predicted RBP	13.29	□□□□□ -0.28
CACNA1C-231	ENST00000616390	SCAI	Q8N9R8	606 aa		13.29	□□□□□ -0.28
CACNA1C-231	ENST00000616390	STARD8	Q92502	1023 aa		13.29	□□□□□ -0.28
CACNA1C-231	ENST00000616390	PROX1	Q92786	737 aa		13.29	□□□□□ -0.28
CACNA1C-231	ENST00000616390	REPS1	Q96D71	796 aa		13.29	□□□□□ -0.28
CACNA1C-231	ENST00000616390	CNDP2	Q96KP4	475 aa	Known RBP	13.29	□□□□□ -0.28
CACNA1C-231	ENST00000616390	COQ10A	Q96MF6	247 aa		13.29	□□□□□ -0.28
CACNA1C-231	ENST00000616390	CCDC177	Q9NQR7	707 aa	Predicted RBP	13.29	□□□□□ -0.28
CACNA1C-231	ENST00000616390	RAB23	Q9ULC3	237 aa		13.29	□□□□□ -0.28
CACNA1C-231	ENST00000616390	PRR23A	A6NEV1	266 aa		13.29	□□□□□ -0.28
CACNA1C-231	ENST00000616390	RGS10	O43665	173 aa		13.29	□□□□□ -0.28
CACNA1C-231	ENST00000616390	PRNP	P04156	253 aa		13.29	□□□□□ -0.28
CACNA1C-231	ENST00000616390	SERPIND1	P05546	499 aa		13.29	□□□□□ -0.28
CACNA1C-231	ENST00000616390	HSD3B1	P14060	373 aa		13.29	□□□□□ -0.28
CACNA1C-231	ENST00000616390	ITIH1	P19827	911 aa		13.29	□□□□□ -0.28
CACNA1C-231	ENST00000616390	HSD3B2	P26439	372 aa		13.29	□□□□□ -0.28
CACNA1C-231	ENST00000616390	C21orf33	P30042	268 aa	Predicted RBP	13.29	□□□□□ -0.28
CACNA1C-231	ENST00000616390	SELENOW	P63302	87 aa		13.29	□□□□□ -0.28
CACNA1C-231	ENST00000616390	CLCA4	Q14CN2	919 aa		13.29	□□□□□ -0.28
CACNA1C-231	ENST00000616390	ADPRM	Q3LIE5	342 aa		13.29	□□□□□ -0.28
CACNA1C-231	ENST00000616390	GPR155	Q7Z3F1	870 aa		13.29	□□□□□ -0.28
CACNA1C-231	ENST00000616390	SZRD1	Q7Z422	152 aa		13.29	□□□□□ -0.28
CACNA1C-231	ENST00000616390	KIAA0907	Q7Z7F0	614 aa	Predicted RBP	13.29	□□□□□ -0.28
CACNA1C-231	ENST00000616390	OR9Q2	Q8NGE9	314 aa		13.29	□□□□□ -0.28
CACNA1C-231	ENST00000616390	GTPBP3	Q969Y2	492 aa	Known RBP	13.29	□□□□□ -0.28
CACNA1C-231	ENST00000616390	COQ8B	Q96D53	544 aa		13.29	□□□□□ -0.28
CACNA1C-231	ENST00000616390	ALOXE3	Q9BYJ1	711 aa		13.29	□□□□□ -0.28
CACNA1C-231	ENST00000616390	CHST8	Q9H2A9	424 aa		13.29	□□□□□ -0.28
CACNA1C-231	ENST00000616390	IL23A	Q9NPF7	189 aa		13.29	□□□□□ -0.28
CACNA1C-231	ENST00000616390	DYRK4	Q9NR20	520 aa		13.29	□□□□□ -0.28
CACNA1C-231	ENST00000616390	NDUFAF4	Q9P032	175 aa		13.29	□□□□□ -0.28
CACNA1C-231	ENST00000616390	ATPIF1	Q9UII2	106 aa		13.29	□□□□□ -0.28
CACNA1C-231	ENST00000616390	NDRG4	Q9ULP0	352 aa	Known RBP	13.29	□□□□□ -0.28
CACNA1C-231	ENST00000616390	HEATR5B	Q9P2D3	2071 aa		13.29	□□□□□ -0.28
CACNA1C-231	ENST00000616390	CXorf51A	A0A1B0GTR3	108 aa		13.28	□□□□□ -0.28
CACNA1C-231	ENST00000616390		A0A1W2PRB8	838 aa		13.28	□□□□□ -0.28
CACNA1C-231	ENST00000616390	TSPAN11	A1L157	253 aa		13.28	□□□□□ -0.28
CACNA1C-231	ENST00000616390	RNASET2	O00584	256 aa	Known RBP	13.28	□□□□□ -0.28
CACNA1C-231	ENST00000616390	SCAMP1	O15126	338 aa		13.28	□□□□□ -0.28
CACNA1C-231	ENST00000616390	PCCB	P05166	539 aa		13.28	□□□□□ -0.28
CACNA1C-231	ENST00000616390	INHBB	P09529	407 aa		13.28	□□□□□ -0.28
CACNA1C-231	ENST00000616390	POR	P16435	677 aa	Predicted RBP	13.28	□□□□□ -0.28
CACNA1C-231	ENST00000616390	PSMB5	P28074	263 aa		13.28	□□□□□ -0.28
CACNA1C-231	ENST00000616390	PNLIPRP1	P54315	467 aa		13.28	□□□□□ -0.28
CACNA1C-231	ENST00000616390	LRRC74A	Q0VAA2	488 aa		13.28	□□□□□ -0.28
CACNA1C-231	ENST00000616390	KEAP1	Q14145	624 aa		13.28	□□□□□ -0.28
CACNA1C-231	ENST00000616390	PAGE2B	Q5JRK9	111 aa		13.28	□□□□□ -0.28
CACNA1C-231	ENST00000616390	PRSS36	Q5K4E3	855 aa		13.28	□□□□□ -0.28
CACNA1C-231	ENST00000616390	C6orf183	Q5T699	404 aa		13.28	□□□□□ -0.28
CACNA1C-231	ENST00000616390	C1orf53	Q5VUE5	145 aa		13.28	□□□□□ -0.28
CACNA1C-231	ENST00000616390	NXPE4	Q6UWF7	544 aa		13.28	□□□□□ -0.28
CACNA1C-231	ENST00000616390	TSEN54	Q7Z6J9	526 aa	Known RBP	13.28	□□□□□ -0.28
CACNA1C-231	ENST00000616390	ENTHD1	Q8IYW4	607 aa		13.28	□□□□□ -0.28
CACNA1C-231	ENST00000616390	DNASE1L2	Q92874	299 aa		13.28	□□□□□ -0.28
CACNA1C-231	ENST00000616390	BAD	Q92934	168 aa		13.28	□□□□□ -0.28
CACNA1C-231	ENST00000616390	NIPSNAP1	Q9BPW8	284 aa		13.28	□□□□□ -0.28
CACNA1C-231	ENST00000616390	SLC6A16	Q9GZN6	736 aa		13.28	□□□□□ -0.28
CACNA1C-231	ENST00000616390	GABARAPL1	Q9H0R8	117 aa		13.28	□□□□□ -0.28
CACNA1C-231	ENST00000616390	CERS4	Q9HA82	394 aa		13.28	□□□□□ -0.28
CACNA1C-231	ENST00000616390	TAC3	Q9UHF0	121 aa		13.28	□□□□□ -0.28
CACNA1C-231	ENST00000616390	TRANK1	O15050	2925 aa		13.28	□□□□□ -0.28
CACNA1C-231	ENST00000616390	TMEM229A	B2RXF0	380 aa		13.28	□□□□□ -0.28
CACNA1C-231	ENST00000616390	LAT	O43561	262 aa		13.28	□□□□□ -0.28
CACNA1C-231	ENST00000616390	FURIN	P09958	794 aa		13.28	□□□□□ -0.28
CACNA1C-231	ENST00000616390	ADRB3	P13945	408 aa		13.28	□□□□□ -0.28
CACNA1C-231	ENST00000616390	TCEA2	Q15560	299 aa		13.28	□□□□□ -0.28
CACNA1C-231	ENST00000616390	EXOC3L2	Q2M3D2	409 aa		13.28	□□□□□ -0.28
CACNA1C-231	ENST00000616390	IQCC	Q4KMZ1	466 aa		13.28	□□□□□ -0.28
CACNA1C-231	ENST00000616390	PERM1	Q5SV97	790 aa		13.28	□□□□□ -0.28
CACNA1C-231	ENST00000616390	GCNT6	Q5T4J0	391 aa		13.28	□□□□□ -0.28
CACNA1C-231	ENST00000616390	C9orf64	Q5T6V5	341 aa		13.28	□□□□□ -0.28
CACNA1C-231	ENST00000616390	EGFLAM	Q63HQ2	1017 aa		13.28	□□□□□ -0.28
CACNA1C-231	ENST00000616390	TNFAIP8L2	Q6P589	184 aa	Predicted RBP	13.28	□□□□□ -0.28
CACNA1C-231	ENST00000616390	FAM124A	Q86V42	546 aa		13.28	□□□□□ -0.28
CACNA1C-231	ENST00000616390	TSPYL5	Q86VY4	417 aa	Predicted RBP	13.28	□□□□□ -0.28
CACNA1C-231	ENST00000616390	PLD3	Q8IV08	490 aa		13.28	□□□□□ -0.28
CACNA1C-231	ENST00000616390	GPR65	Q8IYL9	337 aa		13.28	□□□□□ -0.28
CACNA1C-231	ENST00000616390	IPCEF1	Q8WWN9	437 aa	Predicted RBP	13.28	□□□□□ -0.28
CACNA1C-231	ENST00000616390	TAMM41	Q96BW9	452 aa		13.28	□□□□□ -0.28
CACNA1C-231	ENST00000616390	TSC22D4	Q9Y3Q8	395 aa		13.28	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 60 ms