RNA–Protein interactions for RNA: ENST00000616288.4

PPP4R3B-205, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-205ENST00000616288 OC90Q02509 493 aaPredicted RBP13.06□□□□□ -0.32
PPP4R3B-205ENST00000616288 IRF8Q02556 426 aa13.06□□□□□ -0.32
PPP4R3B-205ENST00000616288 SLC3A1Q07837 685 aa13.06□□□□□ -0.32
PPP4R3B-205ENST00000616288 NAE1Q13564 534 aa13.06□□□□□ -0.32
PPP4R3B-205ENST00000616288 SV2CQ496J9 727 aa13.06□□□□□ -0.32
PPP4R3B-205ENST00000616288 C4orf46Q504U0 113 aa13.06□□□□□ -0.32
PPP4R3B-205ENST00000616288 KRBOX4Q5JUW0 171 aa13.06□□□□□ -0.32
PPP4R3B-205ENST00000616288 GPRC6AQ5T6X5 926 aa13.06□□□□□ -0.32
PPP4R3B-205ENST00000616288 RETSATQ6NUM9 610 aa13.06□□□□□ -0.32
PPP4R3B-205ENST00000616288 VSIG10LQ86VR7 867 aa13.06□□□□□ -0.32
PPP4R3B-205ENST00000616288 PAQR7Q86WK9 346 aa13.06□□□□□ -0.32
PPP4R3B-205ENST00000616288 CILP2Q8IUL8 1156 aa13.06□□□□□ -0.32
PPP4R3B-205ENST00000616288 NLGN4YQ8NFZ3 816 aaPredicted RBP13.06□□□□□ -0.32
PPP4R3B-205ENST00000616288 OR5T2Q8NGG2 359 aa13.06□□□□□ -0.32
PPP4R3B-205ENST00000616288 HMGCLL1Q8TB92 370 aa13.06□□□□□ -0.32
PPP4R3B-205ENST00000616288 THAP7Q9BT49 309 aaPredicted RBP13.06□□□□□ -0.32
PPP4R3B-205ENST00000616288 CDCA7Q9BWT1 371 aaPredicted RBP13.06□□□□□ -0.32
PPP4R3B-205ENST00000616288 MAGIXQ9H6Y5 334 aa13.06□□□□□ -0.32
PPP4R3B-205ENST00000616288 FZD4Q9ULV1 537 aa13.06□□□□□ -0.32
PPP4R3B-205ENST00000616288 PCDHGA9Q9Y5G4 932 aaKnown RBP13.06□□□□□ -0.32
PPP4R3B-205ENST00000616288 A0A075B6Q4 140 aa13.06□□□□□ -0.32
PPP4R3B-205ENST00000616288 HCRTO43612 131 aa13.06□□□□□ -0.32
PPP4R3B-205ENST00000616288 GGT2P36268 569 aa13.06□□□□□ -0.32
PPP4R3B-205ENST00000616288 PAN2Q504Q3 1202 aaKnown RBP13.06□□□□□ -0.32
PPP4R3B-205ENST00000616288 SHEQ5VZ18 495 aa13.06□□□□□ -0.32
PPP4R3B-205ENST00000616288 PLAG1Q6DJT9 500 aa13.06□□□□□ -0.32
PPP4R3B-205ENST00000616288 B3GLCTQ6Y288 498 aa13.06□□□□□ -0.32
PPP4R3B-205ENST00000616288 CERS5Q8N5B7 392 aa13.06□□□□□ -0.32
PPP4R3B-205ENST00000616288 CRYGNQ8WXF5 182 aa13.06□□□□□ -0.32
PPP4R3B-205ENST00000616288 SLC29A3Q9BZD2 475 aa13.06□□□□□ -0.32
PPP4R3B-205ENST00000616288 GORASP2Q9H8Y8 452 aa13.06□□□□□ -0.32
PPP4R3B-205ENST00000616288 ARL5AQ9Y689 179 aa13.06□□□□□ -0.32
PPP4R3B-205ENST00000616288 PDE4DIPQ5VU43 2346 aa13.06□□□□□ -0.32
PPP4R3B-205ENST00000616288 BCORQ6W2J9 1755 aa13.05□□□□□ -0.32
PPP4R3B-205ENST00000616288 IQCF5A8MTL0 148 aa13.05□□□□□ -0.32
PPP4R3B-205ENST00000616288 UPK3BL1B0FP48 263 aa13.05□□□□□ -0.32
PPP4R3B-205ENST00000616288 UPK3BL2E5RIL1 263 aa13.05□□□□□ -0.32
PPP4R3B-205ENST00000616288 FAM72CH0Y354 149 aa13.05□□□□□ -0.32
PPP4R3B-205ENST00000616288 M0R036 132 aa13.05□□□□□ -0.32
PPP4R3B-205ENST00000616288 NCR1O76036 304 aa13.05□□□□□ -0.32
PPP4R3B-205ENST00000616288 CBX7O95931 251 aa13.05□□□□□ -0.32
PPP4R3B-205ENST00000616288 CD1DP15813 335 aa13.05□□□□□ -0.32
PPP4R3B-205ENST00000616288 MAPKAPK2P49137 400 aa13.05□□□□□ -0.32
PPP4R3B-205ENST00000616288 MEOX2P50222 304 aa13.05□□□□□ -0.32
PPP4R3B-205ENST00000616288 PTCHD3Q3KNS1 767 aa13.05□□□□□ -0.32
PPP4R3B-205ENST00000616288 FAM72AQ5TYM5 149 aa13.05□□□□□ -0.32
PPP4R3B-205ENST00000616288 FAM72DQ6L9T8 149 aa13.05□□□□□ -0.32
PPP4R3B-205ENST00000616288 MACC1Q6ZN28 852 aa13.05□□□□□ -0.32
PPP4R3B-205ENST00000616288 FAM72BQ86X60 149 aa13.05□□□□□ -0.32
PPP4R3B-205ENST00000616288 CHPFQ8IZ52 775 aa13.05□□□□□ -0.32
PPP4R3B-205ENST00000616288 SRRQ9GZT4 340 aa13.05□□□□□ -0.32
PPP4R3B-205ENST00000616288 NT5DC2Q9H857 520 aa13.05□□□□□ -0.32
PPP4R3B-205ENST00000616288 AGO3Q9H9G7 860 aaKnown RBP13.05□□□□□ -0.32
PPP4R3B-205ENST00000616288 FLRT1Q9NZU1 646 aa13.05□□□□□ -0.32
PPP4R3B-205ENST00000616288 AKAP7Q9P0M2 348 aaPredicted RBP13.05□□□□□ -0.32
PPP4R3B-205ENST00000616288 DIMT1Q9UNQ2 313 aaKnown RBP13.05□□□□□ -0.32
PPP4R3B-205ENST00000616288 C2orf92A0A1B0GVN3 265 aa13.05□□□□□ -0.32
PPP4R3B-205ENST00000616288 ZNF254O75437 659 aa13.05□□□□□ -0.32
PPP4R3B-205ENST00000616288 GPX5O75715 221 aa13.05□□□□□ -0.32
PPP4R3B-205ENST00000616288 RGS11O94810 467 aa13.05□□□□□ -0.32
PPP4R3B-205ENST00000616288 ATXN8OSP0DMR3 200 aa13.05□□□□□ -0.32
PPP4R3B-205ENST00000616288 AKR1C2P52895 323 aa13.05□□□□□ -0.32
PPP4R3B-205ENST00000616288 AKR1C1Q04828 323 aa13.05□□□□□ -0.32
PPP4R3B-205ENST00000616288 DSC1Q08554 894 aa13.05□□□□□ -0.32
PPP4R3B-205ENST00000616288 VMACQ2NL98 169 aa13.05□□□□□ -0.32
PPP4R3B-205ENST00000616288 ATG9BQ674R7 924 aa13.05□□□□□ -0.32
PPP4R3B-205ENST00000616288 TRNP1Q6NT89 227 aa13.05□□□□□ -0.32
PPP4R3B-205ENST00000616288 ARL9Q6T311 187 aa13.05□□□□□ -0.32
PPP4R3B-205ENST00000616288 ZNF600Q6ZNG1 722 aa13.05□□□□□ -0.32
PPP4R3B-205ENST00000616288 OR4D10Q8NGI6 311 aa13.05□□□□□ -0.32
PPP4R3B-205ENST00000616288 KCNJ9Q92806 393 aa13.05□□□□□ -0.32
PPP4R3B-205ENST00000616288 ANGPT4Q9Y264 503 aa13.05□□□□□ -0.32
PPP4R3B-205ENST00000616288 KCPQ6ZWJ8 1503 aa13.05□□□□□ -0.32
PPP4R3B-205ENST00000616288 CHST10O43529 356 aa13.05□□□□□ -0.32
PPP4R3B-205ENST00000616288 SDC3O75056 442 aa13.05□□□□□ -0.32
PPP4R3B-205ENST00000616288 NME6O75414 186 aaPredicted RBP13.05□□□□□ -0.32
PPP4R3B-205ENST00000616288 SERPIND1P05546 499 aa13.05□□□□□ -0.32
PPP4R3B-205ENST00000616288 CD68P34810 354 aaPredicted RBP13.05□□□□□ -0.32
PPP4R3B-205ENST00000616288 AFF1P51825 1210 aaKnown RBP13.05□□□□□ -0.32
PPP4R3B-205ENST00000616288 CLEC12AQ5QGZ9 265 aa13.05□□□□□ -0.32
PPP4R3B-205ENST00000616288 CPTPQ5TA50 214 aa13.05□□□□□ -0.32
PPP4R3B-205ENST00000616288 SHFQ7M4L6 423 aa13.05□□□□□ -0.32
PPP4R3B-205ENST00000616288 MS4A15Q8N5U1 240 aa13.05□□□□□ -0.32
PPP4R3B-205ENST00000616288 HJURPQ8NCD3 748 aaPredicted RBP13.05□□□□□ -0.32
PPP4R3B-205ENST00000616288 DENND6BQ8NEG7 585 aa13.05□□□□□ -0.32
PPP4R3B-205ENST00000616288 HMGB4Q8WW32 186 aa13.05□□□□□ -0.32
PPP4R3B-205ENST00000616288 TCTEX1D2Q8WW35 142 aa13.05□□□□□ -0.32
PPP4R3B-205ENST00000616288 MAFIPQ8WZ33 124 aa13.05□□□□□ -0.32
PPP4R3B-205ENST00000616288 MED8Q96G25 268 aa13.05□□□□□ -0.32
PPP4R3B-205ENST00000616288 SERPINB11Q96P15 392 aa13.05□□□□□ -0.32
PPP4R3B-205ENST00000616288 DDOQ99489 341 aa13.05□□□□□ -0.32
PPP4R3B-205ENST00000616288 FNDC11Q9BVV2 318 aa13.05□□□□□ -0.32
PPP4R3B-205ENST00000616288 POT1Q9NUX5 634 aa13.05□□□□□ -0.32
PPP4R3B-205ENST00000616288 LRFN2Q9ULH4 789 aa13.05□□□□□ -0.32
PPP4R3B-205ENST00000616288 CACNG2Q9Y698 323 aa13.05□□□□□ -0.32
PPP4R3B-205ENST00000616288 AOC2O75106 756 aa13.04□□□□□ -0.32
PPP4R3B-205ENST00000616288 ZNF35P13682 527 aa13.04□□□□□ -0.32
PPP4R3B-205ENST00000616288 COL19A1Q14993 1142 aa13.04□□□□□ -0.32
PPP4R3B-205ENST00000616288 EIF4HQ15056 248 aaKnown RBP13.04□□□□□ -0.32
PPP4R3B-205ENST00000616288 TCTE1Q5JU00 501 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms