RNA–Protein interactions for RNA: ENST00000616236.1

RFC3-203, Transcript of replication factor C subunit 3, humanhuman

TSL 3

Gene RFC3, Length 612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-203ENST00000616236 CUX2O14529 1486 aa4.59□□□□□ -1.67
RFC3-203ENST00000616236 MLNRO43193 412 aa4.59□□□□□ -1.67
RFC3-203ENST00000616236 ERLIN1O75477 346 aa4.59□□□□□ -1.67
RFC3-203ENST00000616236 PRKRAO75569 313 aaKnown RBP4.59□□□□□ -1.67
RFC3-203ENST00000616236 PDE9AO76083 593 aa4.59□□□□□ -1.67
RFC3-203ENST00000616236 TXNDC12O95881 172 aa4.59□□□□□ -1.67
RFC3-203ENST00000616236 IL1BP01584 269 aa4.59□□□□□ -1.67
RFC3-203ENST00000616236 CT45A8P0DMV1 189 aa4.59□□□□□ -1.67
RFC3-203ENST00000616236 CT45A9P0DMV2 189 aa4.59□□□□□ -1.67
RFC3-203ENST00000616236 GP1BBP13224 206 aa4.59□□□□□ -1.67
RFC3-203ENST00000616236 PRF1P14222 555 aa4.59□□□□□ -1.67
RFC3-203ENST00000616236 DARSP14868 501 aaKnown RBP4.59□□□□□ -1.67
RFC3-203ENST00000616236 CALB2P22676 271 aa4.59□□□□□ -1.67
RFC3-203ENST00000616236 DPP4P27487 766 aa4.59□□□□□ -1.67
RFC3-203ENST00000616236 EPHA2P29317 976 aa4.59□□□□□ -1.67
RFC3-203ENST00000616236 RBMS1P29558 406 aaKnown RBP4.59□□□□□ -1.67
RFC3-203ENST00000616236 ELLP55199 621 aaPredicted RBP4.59□□□□□ -1.67
RFC3-203ENST00000616236 CDH11P55287 796 aa4.59□□□□□ -1.67
RFC3-203ENST00000616236 CNTN2Q02246 1040 aa4.59□□□□□ -1.67
RFC3-203ENST00000616236 KIF5AQ12840 1032 aa4.59□□□□□ -1.67
RFC3-203ENST00000616236 CEACAM7Q14002 265 aa4.59□□□□□ -1.67
RFC3-203ENST00000616236 HERC3Q15034 1050 aa4.59□□□□□ -1.67
RFC3-203ENST00000616236 TRIP10Q15642 601 aa4.59□□□□□ -1.67
RFC3-203ENST00000616236 TRIP6Q15654 476 aaKnown RBP4.59□□□□□ -1.67
RFC3-203ENST00000616236 CCDC57Q2TAC2 916 aa4.59□□□□□ -1.67
RFC3-203ENST00000616236 CT45A2Q5DJT8 189 aa4.59□□□□□ -1.67
RFC3-203ENST00000616236 DCAF10Q5QP82 559 aa4.59□□□□□ -1.67
RFC3-203ENST00000616236 ZNF776Q68DI1 518 aaPredicted RBP4.59□□□□□ -1.67
RFC3-203ENST00000616236 SNRNP48Q6IEG0 339 aaKnown RBP4.59□□□□□ -1.67
RFC3-203ENST00000616236 SLC27A4Q6P1M0 643 aa4.59□□□□□ -1.67
RFC3-203ENST00000616236 C17orf107Q6ZR85 190 aa4.59□□□□□ -1.67
RFC3-203ENST00000616236 CYP4V2Q6ZWL3 525 aaPredicted RBP4.59□□□□□ -1.67
RFC3-203ENST00000616236 LUZP1Q86V48 1076 aa4.59□□□□□ -1.67
RFC3-203ENST00000616236 KMT5CQ86Y97 462 aa4.59□□□□□ -1.67
RFC3-203ENST00000616236 DNAJC22Q8N4W6 341 aa4.59□□□□□ -1.67
RFC3-203ENST00000616236 PRR26Q8N8Z3 221 aa4.59□□□□□ -1.67
RFC3-203ENST00000616236 ZNF114Q8NC26 417 aa4.59□□□□□ -1.67
RFC3-203ENST00000616236 GANCQ8TET4 914 aa4.59□□□□□ -1.67
RFC3-203ENST00000616236 GIPC3Q8TF64 312 aa4.59□□□□□ -1.67
RFC3-203ENST00000616236 DDB2Q92466 427 aa4.59□□□□□ -1.67
RFC3-203ENST00000616236 FBXO32Q969P5 355 aa4.59□□□□□ -1.67
RFC3-203ENST00000616236 BPIFA2Q96DR5 249 aa4.59□□□□□ -1.67
RFC3-203ENST00000616236 RAB40CQ96S21 281 aa4.59□□□□□ -1.67
RFC3-203ENST00000616236 CDCA3Q99618 268 aaPredicted RBP4.59□□□□□ -1.67
RFC3-203ENST00000616236 AGPAT1Q99943 283 aa4.59□□□□□ -1.67
RFC3-203ENST00000616236 JPH2Q9BR39 696 aaPredicted RBP4.59□□□□□ -1.67
RFC3-203ENST00000616236 CCDC77Q9BR77 488 aa4.59□□□□□ -1.67
RFC3-203ENST00000616236 DCLK3Q9C098 648 aa4.59□□□□□ -1.67
RFC3-203ENST00000616236 NCOR1P1Q9H4R4 102 aa4.59□□□□□ -1.67
RFC3-203ENST00000616236 APOBEC3GQ9HC16 384 aaKnown RBP4.59□□□□□ -1.67
RFC3-203ENST00000616236 TCF7L2Q9NQB0 619 aa4.59□□□□□ -1.67
RFC3-203ENST00000616236 FGF21Q9NSA1 209 aa4.59□□□□□ -1.67
RFC3-203ENST00000616236 TRNAU1APQ9NX07 287 aaKnown RBP4.59□□□□□ -1.67
RFC3-203ENST00000616236 MRTO4Q9UKD2 239 aaKnown RBP4.59□□□□□ -1.67
RFC3-203ENST00000616236 CAB39Q9Y376 341 aaPredicted RBP4.59□□□□□ -1.67
RFC3-203ENST00000616236 C2CD2Q9Y426 696 aa4.59□□□□□ -1.67
RFC3-203ENST00000616236 OVOL3O00110 214 aa4.58□□□□□ -1.68
RFC3-203ENST00000616236 CYR61O00622 381 aa4.58□□□□□ -1.68
RFC3-203ENST00000616236 CASQ2O14958 399 aaPredicted RBP4.58□□□□□ -1.68
RFC3-203ENST00000616236 DCXO43602 365 aa4.58□□□□□ -1.68
RFC3-203ENST00000616236 AKAP8O43823 692 aaKnown RBP4.58□□□□□ -1.68
RFC3-203ENST00000616236 PMS2P2O95744 297 aa4.58□□□□□ -1.68
RFC3-203ENST00000616236 MT-ND2P03891 347 aa4.58□□□□□ -1.68
RFC3-203ENST00000616236 APRTP07741 180 aa4.58□□□□□ -1.68
RFC3-203ENST00000616236 HIST1H2AGP0C0S8 130 aaPredicted RBP4.58□□□□□ -1.68
RFC3-203ENST00000616236 GZMAP12544 262 aa4.58□□□□□ -1.68
RFC3-203ENST00000616236 HTR2AP28223 471 aa4.58□□□□□ -1.68
RFC3-203ENST00000616236 CA8P35219 290 aa4.58□□□□□ -1.68
RFC3-203ENST00000616236 AIF1P55008 147 aa4.58□□□□□ -1.68
RFC3-203ENST00000616236 RPL24P83731 157 aaKnown RBP4.58□□□□□ -1.68
RFC3-203ENST00000616236 LGALS3BPQ08380 585 aa4.58□□□□□ -1.68
RFC3-203ENST00000616236 NME3Q13232 169 aa4.58□□□□□ -1.68
RFC3-203ENST00000616236 ITGA9Q13797 1035 aa4.58□□□□□ -1.68
RFC3-203ENST00000616236 RBM39Q14498 530 aaKnown RBP4.58□□□□□ -1.68
RFC3-203ENST00000616236 MXD4Q14582 209 aaPredicted RBP4.58□□□□□ -1.68
RFC3-203ENST00000616236 EXOSC7Q15024 291 aaKnown RBP4.58□□□□□ -1.68
RFC3-203ENST00000616236 SPATS1Q496A3 300 aa4.58□□□□□ -1.68
RFC3-203ENST00000616236 MPPE1Q53F39 396 aa4.58□□□□□ -1.68
RFC3-203ENST00000616236 RABGAP1LQ5R372 815 aa4.58□□□□□ -1.68
RFC3-203ENST00000616236 OR4C11Q6IEV9 310 aa4.58□□□□□ -1.68
RFC3-203ENST00000616236 LRRC8BQ6P9F7 803 aa4.58□□□□□ -1.68
RFC3-203ENST00000616236 TRIM65Q6PJ69 517 aa4.58□□□□□ -1.68
RFC3-203ENST00000616236 CEACAM20Q6UY09 585 aa4.58□□□□□ -1.68
RFC3-203ENST00000616236 TMEM64Q6YI46 380 aa4.58□□□□□ -1.68
RFC3-203ENST00000616236 LDLRAD3Q86YD5 345 aa4.58□□□□□ -1.68
RFC3-203ENST00000616236 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.58□□□□□ -1.68
RFC3-203ENST00000616236 SLC22A9Q8IVM8 553 aa4.58□□□□□ -1.68
RFC3-203ENST00000616236 HIST1H2ACQ93077 130 aa4.58□□□□□ -1.68
RFC3-203ENST00000616236 IGSF21Q96ID5 467 aa4.58□□□□□ -1.68
RFC3-203ENST00000616236 CNOT6LQ96LI5 555 aaKnown RBP4.58□□□□□ -1.68
RFC3-203ENST00000616236 C17orf77Q96MU5 243 aa4.58□□□□□ -1.68
RFC3-203ENST00000616236 DEFB118Q96PH6 123 aa4.58□□□□□ -1.68
RFC3-203ENST00000616236 S1PR3Q99500 378 aa4.58□□□□□ -1.68
RFC3-203ENST00000616236 ALG12Q9BV10 488 aa4.58□□□□□ -1.68
RFC3-203ENST00000616236 TBC1D10AQ9BXI6 508 aa4.58□□□□□ -1.68
RFC3-203ENST00000616236 OR2B2Q9GZK3 357 aa4.58□□□□□ -1.68
RFC3-203ENST00000616236 SLC26A1Q9H2B4 701 aa4.58□□□□□ -1.68
RFC3-203ENST00000616236 ZNF665Q9H7R5 613 aa4.58□□□□□ -1.68
RFC3-203ENST00000616236 UBTD1Q9HAC8 227 aa4.58□□□□□ -1.68
RFC3-203ENST00000616236 SLC52A3Q9NQ40 469 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms