RNA–Protein interactions for RNA: ENST00000614547.4

CDH5-208, Transcript of cadherin 5, humanhuman

TSL 1 (best) BASIC

Gene CDH5, Length 3,779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-208ENST00000614547 ZFP36L2P47974 494 aaKnown RBP11.32□□□□□ -0.6
CDH5-208ENST00000614547 PREPP48147 710 aa11.32□□□□□ -0.6
CDH5-208ENST00000614547 PTSQ03393 145 aa11.32□□□□□ -0.6
CDH5-208ENST00000614547 CNTN1Q12860 1018 aa11.32□□□□□ -0.6
CDH5-208ENST00000614547 RPA4Q13156 261 aa11.32□□□□□ -0.6
CDH5-208ENST00000614547 PCBP1Q15365 356 aaKnown RBP eCLIP11.32□□□□□ -0.6
CDH5-208ENST00000614547 LDLRAD1Q5T700 205 aa11.32□□□□□ -0.6
CDH5-208ENST00000614547 GDF6Q6KF10 455 aaPredicted RBP11.32□□□□□ -0.6
CDH5-208ENST00000614547 NPAS3Q8IXF0 933 aa11.32□□□□□ -0.6
CDH5-208ENST00000614547 ZNF431Q8TF32 576 aaPredicted RBP11.32□□□□□ -0.6
CDH5-208ENST00000614547 ASZ1Q8WWH4 475 aa11.32□□□□□ -0.6
CDH5-208ENST00000614547 SLC9A6Q92581 669 aa11.32□□□□□ -0.6
CDH5-208ENST00000614547 EXOSC8Q96B26 276 aaKnown RBP11.32□□□□□ -0.6
CDH5-208ENST00000614547 C1orf74Q96LT6 269 aa11.32□□□□□ -0.6
CDH5-208ENST00000614547 KCTD7Q96MP8 289 aa11.32□□□□□ -0.6
CDH5-208ENST00000614547 SNX18Q96RF0 628 aa11.32□□□□□ -0.6
CDH5-208ENST00000614547 SEC14L3Q9UDX4 400 aa11.32□□□□□ -0.6
CDH5-208ENST00000614547 TRIM64A6NGJ6 449 aa11.31□□□□□ -0.6
CDH5-208ENST00000614547 HMX3A6NHT5 357 aa11.31□□□□□ -0.6
CDH5-208ENST00000614547 CELP19835 753 aa11.31□□□□□ -0.6
CDH5-208ENST00000614547 OR1D2P34982 312 aa11.31□□□□□ -0.6
CDH5-208ENST00000614547 CDC20Q12834 499 aa11.31□□□□□ -0.6
CDH5-208ENST00000614547 NFATC2Q13469 925 aa11.31□□□□□ -0.6
CDH5-208ENST00000614547 LRRC32Q14392 662 aa11.31□□□□□ -0.6
CDH5-208ENST00000614547 KLHL12Q53G59 568 aa11.31□□□□□ -0.6
CDH5-208ENST00000614547 ADNP2Q6IQ32 1131 aa11.31□□□□□ -0.6
CDH5-208ENST00000614547 RFLNAQ6ZTI6 216 aa11.31□□□□□ -0.6
CDH5-208ENST00000614547 ZNF367Q7RTV3 350 aa11.31□□□□□ -0.6
CDH5-208ENST00000614547 CCDC71Q8IV32 467 aaPredicted RBP11.31□□□□□ -0.6
CDH5-208ENST00000614547 PMEPA1Q969W9 287 aa11.31□□□□□ -0.6
CDH5-208ENST00000614547 CSNK1G1Q9HCP0 422 aa11.31□□□□□ -0.6
CDH5-208ENST00000614547 GALNT9Q9HCQ5 603 aa11.31□□□□□ -0.6
CDH5-208ENST00000614547 C5AR2Q9P296 337 aa11.31□□□□□ -0.6
CDH5-208ENST00000614547 SCML2Q9UQR0 700 aa11.31□□□□□ -0.6
CDH5-208ENST00000614547 GRIP1Q9Y3R0 1128 aa11.31□□□□□ -0.6
CDH5-208ENST00000614547 HSPE1-MOB4S4R3N1 261 aa11.31□□□□□ -0.6
CDH5-208ENST00000614547 C2orf92A0A1B0GVN3 265 aa11.31□□□□□ -0.6
CDH5-208ENST00000614547 NR2F1P10589 423 aa11.31□□□□□ -0.6
CDH5-208ENST00000614547 ALPPL2P10696 532 aa11.31□□□□□ -0.6
CDH5-208ENST00000614547 HLA-EP13747 358 aa11.31□□□□□ -0.6
CDH5-208ENST00000614547 HOXA9P31269 272 aa11.31□□□□□ -0.6
CDH5-208ENST00000614547 SPAM1P38567 509 aa11.31□□□□□ -0.6
CDH5-208ENST00000614547 CSKP41240 450 aa11.31□□□□□ -0.6
CDH5-208ENST00000614547 ZNF81P51508 661 aa11.31□□□□□ -0.6
CDH5-208ENST00000614547 RPS13P62277 151 aaKnown RBP11.31□□□□□ -0.6
CDH5-208ENST00000614547 MAB21L1Q13394 359 aa11.31□□□□□ -0.6
CDH5-208ENST00000614547 CAMK2BQ13554 666 aa11.31□□□□□ -0.6
CDH5-208ENST00000614547 SLC7A6Q92536 515 aa11.31□□□□□ -0.6
CDH5-208ENST00000614547 SCAMP4Q969E2 229 aa11.31□□□□□ -0.6
CDH5-208ENST00000614547 MAP6Q96JE9 813 aa11.31□□□□□ -0.6
CDH5-208ENST00000614547 FNDC11Q9BVV2 318 aa11.31□□□□□ -0.6
CDH5-208ENST00000614547 ITM2BQ9Y287 266 aa11.31□□□□□ -0.6
CDH5-208ENST00000614547 OARD1Q9Y530 152 aa11.31□□□□□ -0.6
CDH5-208ENST00000614547 CD8B2A6NJW9 211 aa11.31□□□□□ -0.6
CDH5-208ENST00000614547 TEX28O15482 410 aa11.31□□□□□ -0.6
CDH5-208ENST00000614547 ERAL1O75616 437 aaKnown RBP11.31□□□□□ -0.6
CDH5-208ENST00000614547 CD8BP10966 210 aa11.31□□□□□ -0.6
CDH5-208ENST00000614547 CCND3P30281 292 aaPredicted RBP11.31□□□□□ -0.6
CDH5-208ENST00000614547 BDKRB1P46663 353 aa11.31□□□□□ -0.6
CDH5-208ENST00000614547 OR3A3P47888 321 aa11.31□□□□□ -0.6
CDH5-208ENST00000614547 NRIP1P48552 1158 aa11.31□□□□□ -0.6
CDH5-208ENST00000614547 CSRP3P50461 194 aa11.31□□□□□ -0.6
CDH5-208ENST00000614547 MANFP55145 182 aaKnown RBP11.31□□□□□ -0.6
CDH5-208ENST00000614547 HEPACAMQ14CZ8 416 aa11.31□□□□□ -0.6
CDH5-208ENST00000614547 FAM110CQ1W6H9 321 aa11.31□□□□□ -0.6
CDH5-208ENST00000614547 MANEALQ5VSG8 457 aa11.31□□□□□ -0.6
CDH5-208ENST00000614547 FAM171BQ6P995 826 aa11.31□□□□□ -0.6
CDH5-208ENST00000614547 SERPINA13PQ6UXR4 307 aa11.31□□□□□ -0.6
CDH5-208ENST00000614547 OLIG3Q7RTU3 272 aa11.31□□□□□ -0.6
CDH5-208ENST00000614547 TMCO2Q7Z6W1 182 aaPredicted RBP11.31□□□□□ -0.6
CDH5-208ENST00000614547 VWA5B2Q8N398 1253 aa11.31□□□□□ -0.6
CDH5-208ENST00000614547 NATD1Q8N6N6 113 aa11.31□□□□□ -0.6
CDH5-208ENST00000614547 DNAJC5GQ8N7S2 189 aa11.31□□□□□ -0.6
CDH5-208ENST00000614547 BEST4Q8NFU0 473 aa11.31□□□□□ -0.6
CDH5-208ENST00000614547 MRPS31Q92665 395 aaKnown RBP11.31□□□□□ -0.6
CDH5-208ENST00000614547 CIDECQ96AQ7 238 aaPredicted RBP11.31□□□□□ -0.6
CDH5-208ENST00000614547 ISG20Q96AZ6 181 aaKnown RBP11.31□□□□□ -0.6
CDH5-208ENST00000614547 CDCP1Q9H5V8 836 aa11.31□□□□□ -0.6
CDH5-208ENST00000614547 EQTNQ9NQ60 294 aa11.31□□□□□ -0.6
CDH5-208ENST00000614547 RUVBL1Q9Y265 456 aaKnown RBP11.31□□□□□ -0.6
CDH5-208ENST00000614547 DYRK1BQ9Y463 629 aa11.31□□□□□ -0.6
CDH5-208ENST00000614547 A0A1W2PPK0 400 aa11.3□□□□□ -0.6
CDH5-208ENST00000614547 H0YC42 278 aa11.3□□□□□ -0.6
CDH5-208ENST00000614547 SGTAO43765 313 aa11.3□□□□□ -0.6
CDH5-208ENST00000614547 JUNDP17535 347 aa11.3□□□□□ -0.6
CDH5-208ENST00000614547 CPN2P22792 545 aa11.3□□□□□ -0.6
CDH5-208ENST00000614547 SLC9A3P48764 834 aa11.3□□□□□ -0.6
CDH5-208ENST00000614547 CLCN4P51793 760 aa11.3□□□□□ -0.6
CDH5-208ENST00000614547 CLCN7P51798 805 aa11.3□□□□□ -0.6
CDH5-208ENST00000614547 CRISP1P54107 249 aa11.3□□□□□ -0.6
CDH5-208ENST00000614547 CDH4P55283 916 aa11.3□□□□□ -0.6
CDH5-208ENST00000614547 KCNC4Q03721 635 aa11.3□□□□□ -0.6
CDH5-208ENST00000614547 COX20Q5RI15 118 aa11.3□□□□□ -0.6
CDH5-208ENST00000614547 BCL2L15Q5TBC7 163 aa11.3□□□□□ -0.6
CDH5-208ENST00000614547 HIST2H2AA3Q6FI13 130 aa11.3□□□□□ -0.6
CDH5-208ENST00000614547 ZNF852Q6ZMS4 543 aa11.3□□□□□ -0.6
CDH5-208ENST00000614547 C9orf43Q8TAL5 461 aaPredicted RBP11.3□□□□□ -0.6
CDH5-208ENST00000614547 CMTM7Q96FZ5 175 aa11.3□□□□□ -0.6
CDH5-208ENST00000614547 NARS2Q96I59 477 aaKnown RBP11.3□□□□□ -0.6
CDH5-208ENST00000614547 FCRL4Q96PJ5 515 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms