RNA–Protein interactions for RNA: ENST00000613138.1

CSTF1-208, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 4

Gene CSTF1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-208ENST00000613138 PCDH17O14917 1159 aa11.89□□□□□ -0.51
CSTF1-208ENST00000613138 DPM1O60762 260 aa11.89□□□□□ -0.51
CSTF1-208ENST00000613138 RPS17P08708 135 aaKnown RBP11.89□□□□□ -0.51
CSTF1-208ENST00000613138 SOX11P35716 441 aa11.89□□□□□ -0.51
CSTF1-208ENST00000613138 ARL1P40616 181 aaPredicted RBP11.89□□□□□ -0.51
CSTF1-208ENST00000613138 LIM2P55344 173 aa11.89□□□□□ -0.51
CSTF1-208ENST00000613138 OR4D2P58180 307 aa11.89□□□□□ -0.51
CSTF1-208ENST00000613138 PCDH1Q08174 1060 aa11.89□□□□□ -0.51
CSTF1-208ENST00000613138 ZRSR2Q15696 482 aaKnown RBP11.89□□□□□ -0.51
CSTF1-208ENST00000613138 HIST2H2ACQ16777 129 aaPredicted RBP11.89□□□□□ -0.51
CSTF1-208ENST00000613138 TSNAXIP1Q2TAA8 658 aa11.89□□□□□ -0.51
CSTF1-208ENST00000613138 BTBD16Q32M84 506 aa11.89□□□□□ -0.51
CSTF1-208ENST00000613138 UNC50Q53HI1 259 aa11.89□□□□□ -0.51
CSTF1-208ENST00000613138 SGO1Q5FBB7 561 aa11.89□□□□□ -0.51
CSTF1-208ENST00000613138 TCHHL1Q5QJ38 904 aaPredicted RBP11.89□□□□□ -0.51
CSTF1-208ENST00000613138 AGAP7PQ5VUJ5 663 aa11.89□□□□□ -0.51
CSTF1-208ENST00000613138 HIST2H2AA3Q6FI13 130 aa11.89□□□□□ -0.51
CSTF1-208ENST00000613138 SH2D5Q6ZV89 423 aa11.89□□□□□ -0.51
CSTF1-208ENST00000613138 KBTBD2Q8IY47 623 aa11.89□□□□□ -0.51
CSTF1-208ENST00000613138 TTLQ8NG68 377 aa11.89□□□□□ -0.51
CSTF1-208ENST00000613138 DOK4Q8TEW6 326 aa11.89□□□□□ -0.51
CSTF1-208ENST00000613138 FAR2Q96K12 515 aa11.89□□□□□ -0.51
CSTF1-208ENST00000613138 AGAP4Q96P64 663 aa11.89□□□□□ -0.51
CSTF1-208ENST00000613138 OR1F2PQ96R84 312 aa11.89□□□□□ -0.51
CSTF1-208ENST00000613138 MRPL57Q9BQC6 102 aaKnown RBP11.89□□□□□ -0.51
CSTF1-208ENST00000613138 MRPL46Q9H2W6 279 aaKnown RBP11.89□□□□□ -0.51
CSTF1-208ENST00000613138 DMRT3Q9NQL9 472 aa11.89□□□□□ -0.51
CSTF1-208ENST00000613138 FARSBQ9NSD9 589 aaKnown RBP11.89□□□□□ -0.51
CSTF1-208ENST00000613138 RIC8BQ9NVN3 520 aa11.89□□□□□ -0.51
CSTF1-208ENST00000613138 KCMF1Q9P0J7 381 aa11.89□□□□□ -0.51
CSTF1-208ENST00000613138 FBXW2Q9UKT8 454 aa11.89□□□□□ -0.51
CSTF1-208ENST00000613138 NTNG1Q9Y2I2 539 aa11.89□□□□□ -0.51
CSTF1-208ENST00000613138 HIVEP3Q5T1R4 2406 aa11.89□□□□□ -0.51
CSTF1-208ENST00000613138 IGKV3D-11A0A0A0MRZ8 115 aa11.88□□□□□ -0.51
CSTF1-208ENST00000613138 IQANK1A0A1B0GTG1 560 aa11.88□□□□□ -0.51
CSTF1-208ENST00000613138 URADA6NGE7 173 aa11.88□□□□□ -0.51
CSTF1-208ENST00000613138 A8MUI8 341 aa11.88□□□□□ -0.51
CSTF1-208ENST00000613138 CYR61O00622 381 aa11.88□□□□□ -0.51
CSTF1-208ENST00000613138 PLPP1O14494 284 aa11.88□□□□□ -0.51
CSTF1-208ENST00000613138 B3GALT2O43825 422 aa11.88□□□□□ -0.51
CSTF1-208ENST00000613138 PRMT3O60678 531 aa11.88□□□□□ -0.51
CSTF1-208ENST00000613138 SMIM24O75264 130 aa11.88□□□□□ -0.51
CSTF1-208ENST00000613138 EEDO75530 441 aaKnown RBP11.88□□□□□ -0.51
CSTF1-208ENST00000613138 WISP1O95388 367 aa11.88□□□□□ -0.51
CSTF1-208ENST00000613138 SLU7O95391 586 aaKnown RBP11.88□□□□□ -0.51
CSTF1-208ENST00000613138 GBAP04062 536 aa11.88□□□□□ -0.51
CSTF1-208ENST00000613138 SERPINA7P05543 415 aa11.88□□□□□ -0.51
CSTF1-208ENST00000613138 COL6A2P12110 1019 aa11.88□□□□□ -0.51
CSTF1-208ENST00000613138 ATP5A1P25705 553 aaKnown RBP11.88□□□□□ -0.51
CSTF1-208ENST00000613138 CCNG1P51959 295 aa11.88□□□□□ -0.51
CSTF1-208ENST00000613138 RAB38P57729 211 aa11.88□□□□□ -0.51
CSTF1-208ENST00000613138 FOXK1P85037 733 aa11.88□□□□□ -0.51
CSTF1-208ENST00000613138 LAPTM5Q13571 262 aa11.88□□□□□ -0.51
CSTF1-208ENST00000613138 INPP5JQ15735 1006 aaPredicted RBP11.88□□□□□ -0.51
CSTF1-208ENST00000613138 ERCC6LQ2NKX8 1250 aa11.88□□□□□ -0.51
CSTF1-208ENST00000613138 PAGE2BQ5JRK9 111 aa11.88□□□□□ -0.51
CSTF1-208ENST00000613138 LETMD1Q6P1Q0 360 aa11.88□□□□□ -0.51
CSTF1-208ENST00000613138 TRIM40Q6P9F5 258 aa11.88□□□□□ -0.51
CSTF1-208ENST00000613138 CISD2Q8N5K1 135 aaKnown RBP11.88□□□□□ -0.51
CSTF1-208ENST00000613138 L3MBTL4Q8NA19 623 aa11.88□□□□□ -0.51
CSTF1-208ENST00000613138 OR4F6Q8NGB9 312 aa11.88□□□□□ -0.51
CSTF1-208ENST00000613138 WDR20Q8TBZ3 569 aa11.88□□□□□ -0.51
CSTF1-208ENST00000613138 CPT1CQ8TCG5 803 aa11.88□□□□□ -0.51
CSTF1-208ENST00000613138 ZNF483Q8TF39 744 aaPredicted RBP11.88□□□□□ -0.51
CSTF1-208ENST00000613138 MIB2Q96AX9 1013 aa11.88□□□□□ -0.51
CSTF1-208ENST00000613138 TMEM237Q96Q45 408 aa11.88□□□□□ -0.51
CSTF1-208ENST00000613138 HBEGFQ99075 208 aa11.88□□□□□ -0.51
CSTF1-208ENST00000613138 TUBB6Q9BUF5 446 aa11.88□□□□□ -0.51
CSTF1-208ENST00000613138 ZNF717Q9BY31 904 aaPredicted RBP11.88□□□□□ -0.51
CSTF1-208ENST00000613138 PITHD1Q9GZP4 211 aaPredicted RBP11.88□□□□□ -0.51
CSTF1-208ENST00000613138 C5AR2Q9P296 337 aa11.88□□□□□ -0.51
CSTF1-208ENST00000613138 MAP10Q9P2G4 905 aa11.88□□□□□ -0.51
CSTF1-208ENST00000613138 TCRBV16S1A1N1A0A5B0 115 aa11.87□□□□□ -0.51
CSTF1-208ENST00000613138 TLDC2A0PJX2 215 aa11.87□□□□□ -0.51
CSTF1-208ENST00000613138 STX16-NPEPL1H3BU86 382 aa11.87□□□□□ -0.51
CSTF1-208ENST00000613138 PSMD12O00232 456 aaPredicted RBP11.87□□□□□ -0.51
CSTF1-208ENST00000613138 STX16O14662 325 aa11.87□□□□□ -0.51
CSTF1-208ENST00000613138 LDB3O75112 727 aa11.87□□□□□ -0.51
CSTF1-208ENST00000613138 WDPCPO95876 746 aa11.87□□□□□ -0.51
CSTF1-208ENST00000613138 ALPPP05187 535 aa11.87□□□□□ -0.51
CSTF1-208ENST00000613138 MTTPP55157 894 aa11.87□□□□□ -0.51
CSTF1-208ENST00000613138 HNRNPH2P55795 449 aaKnown RBP11.87□□□□□ -0.51
CSTF1-208ENST00000613138 SLC26A5P58743 744 aa11.87□□□□□ -0.51
CSTF1-208ENST00000613138 ACTN3Q08043 901 aaPredicted RBP11.87□□□□□ -0.51
CSTF1-208ENST00000613138 MFAP5Q13361 173 aa11.87□□□□□ -0.51
CSTF1-208ENST00000613138 DEPDC1Q5TB30 811 aa11.87□□□□□ -0.51
CSTF1-208ENST00000613138 KHDRBS2Q5VWX1 349 aaKnown RBP11.87□□□□□ -0.51
CSTF1-208ENST00000613138 LIPJQ5W064 366 aa11.87□□□□□ -0.51
CSTF1-208ENST00000613138 IGFL2Q6UWQ7 119 aa11.87□□□□□ -0.51
CSTF1-208ENST00000613138 IGFL3Q6UXB1 125 aa11.87□□□□□ -0.51
CSTF1-208ENST00000613138 ISLR2Q6UXK2 745 aa11.87□□□□□ -0.51
CSTF1-208ENST00000613138 QSOX2Q6ZRP7 698 aa11.87□□□□□ -0.51
CSTF1-208ENST00000613138 Q6ZS92 163 aa11.87□□□□□ -0.51
CSTF1-208ENST00000613138 SCUBE1Q8IWY4 988 aa11.87□□□□□ -0.51
CSTF1-208ENST00000613138 OR4N5Q8IXE1 308 aa11.87□□□□□ -0.51
CSTF1-208ENST00000613138 C4orf33Q8N1A6 199 aa11.87□□□□□ -0.51
CSTF1-208ENST00000613138 ZADH2Q8N4Q0 377 aa11.87□□□□□ -0.51
CSTF1-208ENST00000613138 ACOT4Q8N9L9 421 aa11.87□□□□□ -0.51
CSTF1-208ENST00000613138 EIF1ADQ8N9N8 165 aaKnown RBP11.87□□□□□ -0.51
CSTF1-208ENST00000613138 DNAJB14Q8TBM8 379 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms