RNA–Protein interactions for RNA: ENST00000612795.1

CSNK1E-215, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-215ENST00000612795 CLK4Q9HAZ1 481 aaKnown RBP15.97■□□□□ 0.15
CSNK1E-215ENST00000612795 ADAMTS6Q9UKP5 1117 aa15.97■□□□□ 0.15
CSNK1E-215ENST00000612795 CBLCQ9ULV8 474 aa15.97■□□□□ 0.15
CSNK1E-215ENST00000612795 MMACHCQ9Y4U1 282 aa15.97■□□□□ 0.15
CSNK1E-215ENST00000612795 FN1P02751 2386 aaKnown RBP15.96■□□□□ 0.15
CSNK1E-215ENST00000612795 A0A1B0GVC2 190 aa15.96■□□□□ 0.15
CSNK1E-215ENST00000612795 ATP6AP2A0A1C7CYW4 349 aa15.96■□□□□ 0.15
CSNK1E-215ENST00000612795 ATP6AP2O75787 350 aa15.96■□□□□ 0.15
CSNK1E-215ENST00000612795 GLSO94925 669 aaPredicted RBP15.96■□□□□ 0.15
CSNK1E-215ENST00000612795 ATE1O95260 518 aa15.96■□□□□ 0.15
CSNK1E-215ENST00000612795 HEXAP06865 529 aa15.96■□□□□ 0.15
CSNK1E-215ENST00000612795 GABRA1P14867 456 aa15.96■□□□□ 0.15
CSNK1E-215ENST00000612795 NPPBP16860 134 aa15.96■□□□□ 0.15
CSNK1E-215ENST00000612795 SOX3P41225 446 aa15.96■□□□□ 0.15
CSNK1E-215ENST00000612795 SP140Q13342 867 aa15.96■□□□□ 0.15
CSNK1E-215ENST00000612795 CTBP1Q13363 440 aa15.96■□□□□ 0.15
CSNK1E-215ENST00000612795 DHX34Q14147 1143 aaKnown RBP15.96■□□□□ 0.15
CSNK1E-215ENST00000612795 RIPPLY2Q5TAB7 128 aa15.96■□□□□ 0.15
CSNK1E-215ENST00000612795 FAM47EQ6ZV65 393 aa15.96■□□□□ 0.15
CSNK1E-215ENST00000612795 GSTA5Q7RTV2 222 aa15.96■□□□□ 0.15
CSNK1E-215ENST00000612795 SLC13A5Q86YT5 568 aaPredicted RBP15.96■□□□□ 0.15
CSNK1E-215ENST00000612795 ABHD11Q8NFV4 315 aa15.96■□□□□ 0.15
CSNK1E-215ENST00000612795 SREK1Q8WXA9 508 aaKnown RBP15.96■□□□□ 0.15
CSNK1E-215ENST00000612795 ZNF669Q96BR6 464 aaPredicted RBP15.96■□□□□ 0.15
CSNK1E-215ENST00000612795 IL1RL2Q9HB29 575 aa15.96■□□□□ 0.15
CSNK1E-215ENST00000612795 TRMT6Q9UJA5 497 aaKnown RBP15.96■□□□□ 0.15
CSNK1E-215ENST00000612795 ZFP69BQ9UJL9 534 aa15.96■□□□□ 0.15
CSNK1E-215ENST00000612795 COMMD10Q9Y6G5 202 aa15.96■□□□□ 0.15
CSNK1E-215ENST00000612795 FREM3P0C091 2139 aa15.95■□□□□ 0.14
CSNK1E-215ENST00000612795 RTTNQ86VV8 2226 aa15.95■□□□□ 0.14
CSNK1E-215ENST00000612795 JMJD1CQ15652 2540 aa15.95■□□□□ 0.14
CSNK1E-215ENST00000612795 FAM171A2A8MVW0 826 aa15.95■□□□□ 0.14
CSNK1E-215ENST00000612795 PRKNO60260 465 aaPredicted RBP15.95■□□□□ 0.14
CSNK1E-215ENST00000612795 SUSD5O60279 629 aa15.95■□□□□ 0.14
CSNK1E-215ENST00000612795 CELA3AP09093 270 aa15.95■□□□□ 0.14
CSNK1E-215ENST00000612795 HIST1H2AGP0C0S8 130 aaPredicted RBP15.95■□□□□ 0.14
CSNK1E-215ENST00000612795 TPSB2P20231 275 aa15.95■□□□□ 0.14
CSNK1E-215ENST00000612795 HIST1H2ADP20671 130 aa15.95■□□□□ 0.14
CSNK1E-215ENST00000612795 TACR1P25103 407 aa15.95■□□□□ 0.14
CSNK1E-215ENST00000612795 RGS4P49798 205 aa15.95■□□□□ 0.14
CSNK1E-215ENST00000612795 ASCL1P50553 236 aa15.95■□□□□ 0.14
CSNK1E-215ENST00000612795 TERF1P54274 439 aa15.95■□□□□ 0.14
CSNK1E-215ENST00000612795 TPSAB1Q15661 275 aa15.95■□□□□ 0.14
CSNK1E-215ENST00000612795 PHKG1Q16816 387 aa15.95■□□□□ 0.14
CSNK1E-215ENST00000612795 RTL4Q6ZR62 310 aa15.95■□□□□ 0.14
CSNK1E-215ENST00000612795 STRA8Q7Z7C7 330 aa15.95■□□□□ 0.14
CSNK1E-215ENST00000612795 CA13Q8N1Q1 262 aa15.95■□□□□ 0.14
CSNK1E-215ENST00000612795 OR4K1Q8NGD4 311 aa15.95■□□□□ 0.14
CSNK1E-215ENST00000612795 PYCR2Q96C36 320 aa15.95■□□□□ 0.14
CSNK1E-215ENST00000612795 SNF8Q96H20 258 aa15.95■□□□□ 0.14
CSNK1E-215ENST00000612795 HIST1H2AHQ96KK5 128 aa15.95■□□□□ 0.14
CSNK1E-215ENST00000612795 RASL10BQ96S79 203 aa15.95■□□□□ 0.14
CSNK1E-215ENST00000612795 HIST1H2AJQ99878 128 aa15.95■□□□□ 0.14
CSNK1E-215ENST00000612795 AARSD1Q9BTE6 412 aaKnown RBP15.95■□□□□ 0.14
CSNK1E-215ENST00000612795 H2AFJQ9BTM1 129 aa15.95■□□□□ 0.14
CSNK1E-215ENST00000612795 CNPPD1Q9BV87 410 aa15.95■□□□□ 0.14
CSNK1E-215ENST00000612795 PARVBQ9HBI1 364 aa15.95■□□□□ 0.14
CSNK1E-215ENST00000612795 NEUROD4Q9HD90 331 aa15.95■□□□□ 0.14
CSNK1E-215ENST00000612795 MYOTQ9UBF9 498 aa15.95■□□□□ 0.14
CSNK1E-215ENST00000612795 PPIEQ9UNP9 301 aaKnown RBP15.95■□□□□ 0.14
CSNK1E-215ENST00000612795 HSPB2A8KAH6 182 aa15.94■□□□□ 0.14
CSNK1E-215ENST00000612795 WWP2O00308 870 aa15.94■□□□□ 0.14
CSNK1E-215ENST00000612795 SYT5O00445 386 aa15.94■□□□□ 0.14
CSNK1E-215ENST00000612795 DVL2O14641 736 aa15.94■□□□□ 0.14
CSNK1E-215ENST00000612795 CNR1P21554 472 aa15.94■□□□□ 0.14
CSNK1E-215ENST00000612795 BMP5P22003 454 aa15.94■□□□□ 0.14
CSNK1E-215ENST00000612795 PPP2R1BP30154 601 aa15.94■□□□□ 0.14
CSNK1E-215ENST00000612795 AHRP35869 848 aa15.94■□□□□ 0.14
CSNK1E-215ENST00000612795 SLC1A2P43004 574 aa15.94■□□□□ 0.14
CSNK1E-215ENST00000612795 SCTRP47872 440 aa15.94■□□□□ 0.14
CSNK1E-215ENST00000612795 DNASE1L1P49184 302 aa15.94■□□□□ 0.14
CSNK1E-215ENST00000612795 CDK16Q00536 496 aa15.94■□□□□ 0.14
CSNK1E-215ENST00000612795 DHX9Q08211 1270 aaKnown RBP15.94■□□□□ 0.14
CSNK1E-215ENST00000612795 KIF5AQ12840 1032 aa15.94■□□□□ 0.14
CSNK1E-215ENST00000612795 SLC13A2Q13183 592 aa15.94■□□□□ 0.14
CSNK1E-215ENST00000612795 SLC10A1Q14973 349 aa15.94■□□□□ 0.14
CSNK1E-215ENST00000612795 HSPB2Q16082 182 aa15.94■□□□□ 0.14
CSNK1E-215ENST00000612795 ZNF750Q32MQ0 723 aa15.94■□□□□ 0.14
CSNK1E-215ENST00000612795 XKR6Q5GH73 641 aa15.94■□□□□ 0.14
CSNK1E-215ENST00000612795 CATSPEREQ5SY80 951 aa15.94■□□□□ 0.14
CSNK1E-215ENST00000612795 RAD9BQ6WBX8 426 aa15.94■□□□□ 0.14
CSNK1E-215ENST00000612795 MYO1HQ8N1T3 1032 aa15.94■□□□□ 0.14
CSNK1E-215ENST00000612795 RELL2Q8NC24 303 aaPredicted RBP15.94■□□□□ 0.14
CSNK1E-215ENST00000612795 LRRN4CLQ8ND94 238 aa15.94■□□□□ 0.14
CSNK1E-215ENST00000612795 RNASE6Q93091 150 aaKnown RBP15.94■□□□□ 0.14
CSNK1E-215ENST00000612795 ARSGQ96EG1 525 aa15.94■□□□□ 0.14
CSNK1E-215ENST00000612795 MDFIQ99750 246 aa15.94■□□□□ 0.14
CSNK1E-215ENST00000612795 TRIM5Q9C035 493 aa15.94■□□□□ 0.14
CSNK1E-215ENST00000612795 ZNF395Q9H8N7 513 aaPredicted RBP15.94■□□□□ 0.14
CSNK1E-215ENST00000612795 ADAP2Q9NPF8 381 aa15.94■□□□□ 0.14
CSNK1E-215ENST00000612795 PRTFDC1Q9NRG1 225 aa15.94■□□□□ 0.14
CSNK1E-215ENST00000612795 ARL15Q9NXU5 204 aa15.94■□□□□ 0.14
CSNK1E-215ENST00000612795 TRGV5A0A0B4J1U4 118 aa15.93■□□□□ 0.14
CSNK1E-215ENST00000612795 P04436 131 aa15.93■□□□□ 0.14
CSNK1E-215ENST00000612795 HOXC12P31275 282 aa15.93■□□□□ 0.14
CSNK1E-215ENST00000612795 SARNPP82979 210 aaKnown RBP15.93■□□□□ 0.14
CSNK1E-215ENST00000612795 BMPR2Q13873 1038 aa15.93■□□□□ 0.14
CSNK1E-215ENST00000612795 CSHL1Q14406 222 aa15.93■□□□□ 0.14
CSNK1E-215ENST00000612795 TOR1AIP1Q5JTV8 583 aa15.93■□□□□ 0.14
CSNK1E-215ENST00000612795 UGT3A1Q6NUS8 523 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms