RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 SPRTNQ9H040 489 aaPredicted RBP8.41□□□□□ -1.06
SMAD4-217ENST00000611848 SPAG4Q9NPE6 437 aa8.41□□□□□ -1.06
SMAD4-217ENST00000611848 SLC52A3Q9NQ40 469 aa8.41□□□□□ -1.06
SMAD4-217ENST00000611848 PFDN4Q9NQP4 134 aa8.41□□□□□ -1.06
SMAD4-217ENST00000611848 ENAMQ9NRM1 1142 aa8.41□□□□□ -1.06
SMAD4-217ENST00000611848 TMEM45AQ9NWC5 275 aa8.41□□□□□ -1.06
SMAD4-217ENST00000611848 CUEDC1Q9NWM3 386 aaPredicted RBP8.41□□□□□ -1.06
SMAD4-217ENST00000611848 IRAK4Q9NWZ3 460 aa8.41□□□□□ -1.06
SMAD4-217ENST00000611848 WWOXQ9NZC7 414 aa8.41□□□□□ -1.06
SMAD4-217ENST00000611848 CD274Q9NZQ7 290 aa8.41□□□□□ -1.06
SMAD4-217ENST00000611848 PTBP2Q9UKA9 531 aaKnown RBP8.41□□□□□ -1.06
SMAD4-217ENST00000611848 CROTQ9UKG9 612 aa8.41□□□□□ -1.06
SMAD4-217ENST00000611848 PACSIN3Q9UKS6 424 aa8.41□□□□□ -1.06
SMAD4-217ENST00000611848 SLC22A14Q9Y267 594 aa8.41□□□□□ -1.06
SMAD4-217ENST00000611848 DYRK1BQ9Y463 629 aa8.41□□□□□ -1.06
SMAD4-217ENST00000611848 GPR45Q9Y5Y3 372 aa8.41□□□□□ -1.06
SMAD4-217ENST00000611848 PTGDR2Q9Y5Y4 395 aa8.41□□□□□ -1.06
SMAD4-217ENST00000611848 KCNE2Q9Y6J6 123 aa8.41□□□□□ -1.06
SMAD4-217ENST00000611848 TAPBPO15533 448 aa8.4□□□□□ -1.06
SMAD4-217ENST00000611848 ZNF749O43361 778 aa8.4□□□□□ -1.06
SMAD4-217ENST00000611848 HCRTR1O43613 425 aa8.4□□□□□ -1.06
SMAD4-217ENST00000611848 STK16O75716 305 aa8.4□□□□□ -1.06
SMAD4-217ENST00000611848 WDR47O94967 919 aa8.4□□□□□ -1.06
SMAD4-217ENST00000611848 KLK3P07288 261 aaPredicted RBP8.4□□□□□ -1.06
SMAD4-217ENST00000611848 CCR8P51685 355 aa8.4□□□□□ -1.06
SMAD4-217ENST00000611848 ARSFP54793 590 aa8.4□□□□□ -1.06
SMAD4-217ENST00000611848 UCNP55089 124 aa8.4□□□□□ -1.06
SMAD4-217ENST00000611848 RPS15AP62244 130 aaKnown RBP8.4□□□□□ -1.06
SMAD4-217ENST00000611848 CSNK1G2P78368 415 aa8.4□□□□□ -1.06
SMAD4-217ENST00000611848 MRPS35P82673 323 aaKnown RBP8.4□□□□□ -1.06
SMAD4-217ENST00000611848 TLE3Q04726 772 aa8.4□□□□□ -1.06
SMAD4-217ENST00000611848 KLC1Q07866 573 aa8.4□□□□□ -1.06
SMAD4-217ENST00000611848 TRIM25Q14258 630 aaKnown RBP8.4□□□□□ -1.06
SMAD4-217ENST00000611848 GRM7Q14831 915 aa8.4□□□□□ -1.06
SMAD4-217ENST00000611848 TGIF1Q15583 401 aa8.4□□□□□ -1.06
SMAD4-217ENST00000611848 MANEAQ5SRI9 462 aa8.4□□□□□ -1.06
SMAD4-217ENST00000611848 OGFRL1Q5TC84 451 aaPredicted RBP8.4□□□□□ -1.06
SMAD4-217ENST00000611848 RHBDD2Q6NTF9 364 aa8.4□□□□□ -1.06
SMAD4-217ENST00000611848 METTL2BQ6P1Q9 378 aaKnown RBP8.4□□□□□ -1.06
SMAD4-217ENST00000611848 GPRIN3Q6ZVF9 776 aa8.4□□□□□ -1.06
SMAD4-217ENST00000611848 TIPARPQ7Z3E1 657 aaKnown RBP8.4□□□□□ -1.06
SMAD4-217ENST00000611848 PDSS2Q86YH6 399 aa8.4□□□□□ -1.06
SMAD4-217ENST00000611848 PQLC1Q8N2U9 271 aa8.4□□□□□ -1.06
SMAD4-217ENST00000611848 TTC29Q8NA56 475 aaPredicted RBP8.4□□□□□ -1.06
SMAD4-217ENST00000611848 PCYOX1LQ8NBM8 494 aa8.4□□□□□ -1.06
SMAD4-217ENST00000611848 GALNT6Q8NCL4 622 aa8.4□□□□□ -1.06
SMAD4-217ENST00000611848 SLC5A11Q8WWX8 675 aa8.4□□□□□ -1.06
SMAD4-217ENST00000611848 RERGQ96A58 199 aaPredicted RBP8.4□□□□□ -1.06
SMAD4-217ENST00000611848 TUBGCP3Q96CW5 907 aa8.4□□□□□ -1.06
SMAD4-217ENST00000611848 THAP11Q96EK4 314 aa8.4□□□□□ -1.06
SMAD4-217ENST00000611848 DUS3LQ96G46 650 aaKnown RBP8.4□□□□□ -1.06
SMAD4-217ENST00000611848 OR2A5Q96R48 311 aa8.4□□□□□ -1.06
SMAD4-217ENST00000611848 OR4K3Q96R72 315 aa8.4□□□□□ -1.06
SMAD4-217ENST00000611848 NR1H4Q96RI1 486 aaPredicted RBP8.4□□□□□ -1.06
SMAD4-217ENST00000611848 CCNL2Q96S94 520 aaPredicted RBP8.4□□□□□ -1.06
SMAD4-217ENST00000611848 SARGQ9BW04 601 aa8.4□□□□□ -1.06
SMAD4-217ENST00000611848 LHX9Q9NQ69 397 aa8.4□□□□□ -1.06
SMAD4-217ENST00000611848 AIG1Q9NVV5 245 aa8.4□□□□□ -1.06
SMAD4-217ENST00000611848 GPRC5BQ9NZH0 403 aa8.4□□□□□ -1.06
SMAD4-217ENST00000611848 PADI1Q9ULC6 663 aa8.4□□□□□ -1.06
SMAD4-217ENST00000611848 SRPK3Q9UPE1 567 aa8.4□□□□□ -1.06
SMAD4-217ENST00000611848 NDUFAF1Q9Y375 327 aa8.4□□□□□ -1.06
SMAD4-217ENST00000611848 ASB1Q9Y576 335 aa8.4□□□□□ -1.06
SMAD4-217ENST00000611848 CCDC88CQ9P219 2028 aa8.4□□□□□ -1.07
SMAD4-217ENST00000611848 KCNE1BA0A087WTH5 132 aa8.4□□□□□ -1.07
SMAD4-217ENST00000611848 PRSS51A0A1B0GVH4 220 aa8.4□□□□□ -1.07
SMAD4-217ENST00000611848 FITM1A5D6W6 292 aa8.4□□□□□ -1.07
SMAD4-217ENST00000611848 A6NHS1 94 aa8.4□□□□□ -1.07
SMAD4-217ENST00000611848 H0YGG7 62 aa8.4□□□□□ -1.07
SMAD4-217ENST00000611848 TXNDC9O14530 226 aa8.4□□□□□ -1.07
SMAD4-217ENST00000611848 OR7A17O14581 309 aa8.4□□□□□ -1.07
SMAD4-217ENST00000611848 HAT1O14929 419 aa8.4□□□□□ -1.07
SMAD4-217ENST00000611848 CRCPO75575 148 aa8.4□□□□□ -1.07
SMAD4-217ENST00000611848 SMNDC1O75940 238 aaKnown RBP eCLIP8.4□□□□□ -1.07
SMAD4-217ENST00000611848 CHEK2O96017 543 aa8.4□□□□□ -1.07
SMAD4-217ENST00000611848 C8BP07358 591 aa8.4□□□□□ -1.07
SMAD4-217ENST00000611848 CDH1P12830 882 aa8.4□□□□□ -1.07
SMAD4-217ENST00000611848 RORAP35398 523 aa8.4□□□□□ -1.07
SMAD4-217ENST00000611848 GDF5P43026 501 aa8.4□□□□□ -1.07
SMAD4-217ENST00000611848 EMP3P54852 163 aa8.4□□□□□ -1.07
SMAD4-217ENST00000611848 VSX2P58304 361 aaPredicted RBP8.4□□□□□ -1.07
SMAD4-217ENST00000611848 ARF3P61204 181 aaPredicted RBP8.4□□□□□ -1.07
SMAD4-217ENST00000611848 RBBP7Q16576 425 aa8.4□□□□□ -1.07
SMAD4-217ENST00000611848 FAM214AQ32MH5 1076 aa8.4□□□□□ -1.07
SMAD4-217ENST00000611848 SPATS1Q496A3 300 aa8.4□□□□□ -1.07
SMAD4-217ENST00000611848 PDCD4Q53EL6 469 aaKnown RBP8.4□□□□□ -1.07
SMAD4-217ENST00000611848 FBXO48Q5FWF7 155 aa8.4□□□□□ -1.07
SMAD4-217ENST00000611848 SAMD4BQ5PRF9 694 aaKnown RBP8.4□□□□□ -1.07
SMAD4-217ENST00000611848 PRAMEF17Q5VTA0 474 aa8.4□□□□□ -1.07
SMAD4-217ENST00000611848 FRMPD2BQ6IN97 320 aa8.4□□□□□ -1.07
SMAD4-217ENST00000611848 PRMT9Q6P2P2 845 aa8.4□□□□□ -1.07
SMAD4-217ENST00000611848 BLOC1S3Q6QNY0 202 aa8.4□□□□□ -1.07
SMAD4-217ENST00000611848 RNF165Q6ZSG1 346 aa8.4□□□□□ -1.07
SMAD4-217ENST00000611848 LRRC70Q7Z2Q7 622 aa8.4□□□□□ -1.07
SMAD4-217ENST00000611848 RETREG3Q86VR2 466 aa8.4□□□□□ -1.07
SMAD4-217ENST00000611848 TBC1D19Q8N5T2 526 aa8.4□□□□□ -1.07
SMAD4-217ENST00000611848 ZNF655Q8N720 491 aaPredicted RBP8.4□□□□□ -1.07
SMAD4-217ENST00000611848 RNF148Q8N7C7 305 aa8.4□□□□□ -1.07
SMAD4-217ENST00000611848 BHLHE22Q8NFJ8 381 aaPredicted RBP8.4□□□□□ -1.07
SMAD4-217ENST00000611848 OR4K1Q8NGD4 311 aa8.4□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms