RNA–Protein interactions for RNA: ENST00000611577.4

MUC1-224, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-224ENST00000611577 FAR2Q96K12 515 aa16.69■□□□□ 0.26
MUC1-224ENST00000611577 MAGEB10Q96LZ2 347 aaPredicted RBP16.69■□□□□ 0.26
MUC1-224ENST00000611577 NSUN5Q96P11 429 aaKnown RBP16.69■□□□□ 0.26
MUC1-224ENST00000611577 TMEM237Q96Q45 408 aa16.69■□□□□ 0.26
MUC1-224ENST00000611577 PHF12Q96QT6 1004 aa16.69■□□□□ 0.26
MUC1-224ENST00000611577 C12orf65Q9H3J6 166 aaKnown RBP16.69■□□□□ 0.26
MUC1-224ENST00000611577 TRPC4Q9UBN4 977 aa16.69■□□□□ 0.26
MUC1-224ENST00000611577 MRPS2Q9Y399 296 aaKnown RBP16.69■□□□□ 0.26
MUC1-224ENST00000611577 PCDHGA11Q9Y5H2 935 aa16.69■□□□□ 0.26
MUC1-224ENST00000611577 OTOGQ6ZRI0 2925 aa16.69■□□□□ 0.26
MUC1-224ENST00000611577 CCDC88CQ9P219 2028 aa16.69■□□□□ 0.26
MUC1-224ENST00000611577 CLEC3AO75596 197 aa16.68■□□□□ 0.26
MUC1-224ENST00000611577 NSA2O95478 260 aaKnown RBP16.68■□□□□ 0.26
MUC1-224ENST00000611577 ZNF888P0CJ79 500 aaPredicted RBP16.68■□□□□ 0.26
MUC1-224ENST00000611577 PRF1P14222 555 aa16.68■□□□□ 0.26
MUC1-224ENST00000611577 TSPAN8P19075 237 aa16.68■□□□□ 0.26
MUC1-224ENST00000611577 SERPINB1P30740 379 aa16.68■□□□□ 0.26
MUC1-224ENST00000611577 TSFMP43897 325 aaKnown RBP16.68■□□□□ 0.26
MUC1-224ENST00000611577 CDH13P55290 713 aa16.68■□□□□ 0.26
MUC1-224ENST00000611577 CLCQ05315 142 aa16.68■□□□□ 0.26
MUC1-224ENST00000611577 TGM3Q08188 693 aa16.68■□□□□ 0.26
MUC1-224ENST00000611577 ZRSR2Q15696 482 aaKnown RBP16.68■□□□□ 0.26
MUC1-224ENST00000611577 ZNF678Q5SXM1 525 aa16.68■□□□□ 0.26
MUC1-224ENST00000611577 IRAK1BP1Q5VVH5 260 aa16.68■□□□□ 0.26
MUC1-224ENST00000611577 OVCH1Q7RTY7 1134 aa16.68■□□□□ 0.26
MUC1-224ENST00000611577 ARMC2Q8NEN0 867 aa16.68■□□□□ 0.26
MUC1-224ENST00000611577 DNAJB14Q8TBM8 379 aa16.68■□□□□ 0.26
MUC1-224ENST00000611577 TRPC4APQ8TEL6 797 aa16.68■□□□□ 0.26
MUC1-224ENST00000611577 ZNF483Q8TF39 744 aaPredicted RBP16.68■□□□□ 0.26
MUC1-224ENST00000611577 SREK1Q8WXA9 508 aaKnown RBP16.68■□□□□ 0.26
MUC1-224ENST00000611577 CNDP1Q96KN2 507 aa16.68■□□□□ 0.26
MUC1-224ENST00000611577 FAM111AQ96PZ2 611 aa16.68■□□□□ 0.26
MUC1-224ENST00000611577 CDK15Q96Q40 435 aa16.68■□□□□ 0.26
MUC1-224ENST00000611577 COPG2Q9UBF2 871 aa16.68■□□□□ 0.26
MUC1-224ENST00000611577 ZNF282Q9UDV7 671 aaPredicted RBP16.68■□□□□ 0.26
MUC1-224ENST00000611577 ADGRE2Q9UHX3 823 aa16.68■□□□□ 0.26
MUC1-224ENST00000611577 NXT1Q9UKK6 140 aaKnown RBP16.68■□□□□ 0.26
MUC1-224ENST00000611577 ENTPD4Q9Y227 616 aa16.68■□□□□ 0.26
MUC1-224ENST00000611577 STK38LQ9Y2H1 464 aa16.68■□□□□ 0.26
MUC1-224ENST00000611577 PLLPQ9Y342 182 aa16.68■□□□□ 0.26
MUC1-224ENST00000611577 NAALAD2Q9Y3Q0 740 aa16.68■□□□□ 0.26
MUC1-224ENST00000611577 SLC22A7Q9Y694 548 aa16.68■□□□□ 0.26
MUC1-224ENST00000611577 APCP25054 2843 aa16.68■□□□□ 0.26
MUC1-224ENST00000611577 A0A088AWK7 358 aa16.67■□□□□ 0.26
MUC1-224ENST00000611577 H0YIG0 161 aa16.67■□□□□ 0.26
MUC1-224ENST00000611577 OR7A17O14581 309 aa16.67■□□□□ 0.26
MUC1-224ENST00000611577 FOXS1O43638 330 aa16.67■□□□□ 0.26
MUC1-224ENST00000611577 ZG16O60844 167 aa16.67■□□□□ 0.26
MUC1-224ENST00000611577 KLHL18O94889 574 aa16.67■□□□□ 0.26
MUC1-224ENST00000611577 MLYCDO95822 493 aa16.67■□□□□ 0.26
MUC1-224ENST00000611577 ALBP02768 609 aa16.67■□□□□ 0.26
MUC1-224ENST00000611577 EDN3P14138 238 aa16.67■□□□□ 0.26
MUC1-224ENST00000611577 ALOX12P18054 663 aa16.67■□□□□ 0.26
MUC1-224ENST00000611577 ZNF10P21506 573 aaPredicted RBP16.67■□□□□ 0.26
MUC1-224ENST00000611577 MMP11P24347 488 aa16.67■□□□□ 0.26
MUC1-224ENST00000611577 RAB8AP61006 207 aa16.67■□□□□ 0.26
MUC1-224ENST00000611577 PCDH1Q08174 1060 aa16.67■□□□□ 0.26
MUC1-224ENST00000611577 ASPHQ12797 758 aa16.67■□□□□ 0.26
MUC1-224ENST00000611577 DSG2Q14126 1118 aa16.67■□□□□ 0.26
MUC1-224ENST00000611577 DEFB134Q4QY38 66 aa16.67■□□□□ 0.26
MUC1-224ENST00000611577 UNC50Q53HI1 259 aa16.67■□□□□ 0.26
MUC1-224ENST00000611577 AGAP7PQ5VUJ5 663 aa16.67■□□□□ 0.26
MUC1-224ENST00000611577 TRIM40Q6P9F5 258 aa16.67■□□□□ 0.26
MUC1-224ENST00000611577 RPS27LQ71UM5 84 aaKnown RBP16.67■□□□□ 0.26
MUC1-224ENST00000611577 OR7G3Q8NG95 312 aa16.67■□□□□ 0.26
MUC1-224ENST00000611577 OR52B6Q8NGF0 335 aa16.67■□□□□ 0.26
MUC1-224ENST00000611577 TCP10LQ8TDR4 215 aa16.67■□□□□ 0.26
MUC1-224ENST00000611577 CREB3L4Q8TEY5 395 aa16.67■□□□□ 0.26
MUC1-224ENST00000611577 MIEF2Q96C03 454 aa16.67■□□□□ 0.26
MUC1-224ENST00000611577 L3HYPDHQ96EM0 354 aa16.67■□□□□ 0.26
MUC1-224ENST00000611577 AGAP4Q96P64 663 aa16.67■□□□□ 0.26
MUC1-224ENST00000611577 CENPKQ9BS16 269 aa16.67■□□□□ 0.26
MUC1-224ENST00000611577 NTMT1Q9BV86 223 aa16.67■□□□□ 0.26
MUC1-224ENST00000611577 C1QTNF3Q9BXJ4 246 aa16.67■□□□□ 0.26
MUC1-224ENST00000611577 SLC6A16Q9GZN6 736 aa16.67■□□□□ 0.26
MUC1-224ENST00000611577 RHBGQ9H310 441 aa16.67■□□□□ 0.26
MUC1-224ENST00000611577 COPS7BQ9H9Q2 264 aaPredicted RBP16.67■□□□□ 0.26
MUC1-224ENST00000611577 SLC22A11Q9NSA0 550 aa16.67■□□□□ 0.26
MUC1-224ENST00000611577 CTSFQ9UBX1 484 aa16.67■□□□□ 0.26
MUC1-224ENST00000611577 ZNF490Q9ULM2 529 aaPredicted RBP16.67■□□□□ 0.26
MUC1-224ENST00000611577 RNF11Q9Y3C5 154 aa16.67■□□□□ 0.26
MUC1-224ENST00000611577 G3V2L1 256 aa16.66■□□□□ 0.26
MUC1-224ENST00000611577 SGK494L7N484 410 aa16.66■□□□□ 0.26
MUC1-224ENST00000611577 FFAR3O14843 346 aa16.66■□□□□ 0.26
MUC1-224ENST00000611577 GPR42O15529 346 aa16.66■□□□□ 0.26
MUC1-224ENST00000611577 ERI3O43414 337 aaKnown RBP16.66■□□□□ 0.26
MUC1-224ENST00000611577 ITGAXP20702 1163 aa16.66■□□□□ 0.26
MUC1-224ENST00000611577 NAA20P61599 178 aa16.66■□□□□ 0.26
MUC1-224ENST00000611577 MAT1AQ00266 395 aaKnown RBP16.66■□□□□ 0.26
MUC1-224ENST00000611577 E2F2Q14209 437 aa16.66■□□□□ 0.26
MUC1-224ENST00000611577 ZNF169Q14929 603 aaPredicted RBP16.66■□□□□ 0.26
MUC1-224ENST00000611577 MFSD4BQ5TF39 518 aa16.66■□□□□ 0.26
MUC1-224ENST00000611577 ADNP2Q6IQ32 1131 aa16.66■□□□□ 0.26
MUC1-224ENST00000611577 COX15Q7KZN9 410 aa16.66■□□□□ 0.26
MUC1-224ENST00000611577 PRSS41Q7RTY9 318 aa16.66■□□□□ 0.26
MUC1-224ENST00000611577 LAS2Q8IYD9 372 aa16.66■□□□□ 0.26
MUC1-224ENST00000611577 PRSS58Q8IYP2 241 aa16.66■□□□□ 0.26
MUC1-224ENST00000611577 L3MBTL4Q8NA19 623 aa16.66■□□□□ 0.26
MUC1-224ENST00000611577 OR4F6Q8NGB9 312 aa16.66■□□□□ 0.26
MUC1-224ENST00000611577 UTP15Q8TED0 518 aaKnown RBP16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms