RNA–Protein interactions for RNA: ENST00000611571.4

MUC1-223, Transcript of mucin 1, cell surface associated, human

APPRIS ALT2 TSL 5 BASIC

Gene MUC1, Length 4,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MUC1-223	ENST00000611571	CATSPERE	Q5SY80	951 aa		13.32	□□□□□ -0.28
MUC1-223	ENST00000611571	BICRAL	Q6AI39	1079 aa		13.32	□□□□□ -0.28
MUC1-223	ENST00000611571	ALKAL1	Q6UXT8	129 aa		13.32	□□□□□ -0.28
MUC1-223	ENST00000611571	C2orf15	Q8WU43	125 aa	Known RBP	13.32	□□□□□ -0.28
MUC1-223	ENST00000611571	SLC5A11	Q8WWX8	675 aa		13.32	□□□□□ -0.28
MUC1-223	ENST00000611571	NUS1	Q96E22	293 aa		13.32	□□□□□ -0.28
MUC1-223	ENST00000611571	MGME1	Q9BQP7	344 aa		13.32	□□□□□ -0.28
MUC1-223	ENST00000611571	SORBS1	Q9BX66	1292 aa	Known RBP	13.32	□□□□□ -0.28
MUC1-223	ENST00000611571		Q9Y3F1	56 aa		13.32	□□□□□ -0.28
MUC1-223	ENST00000611571	PCDHB11	Q9Y5F2	797 aa		13.32	□□□□□ -0.28
MUC1-223	ENST00000611571	TTC3	P53804	2025 aa		13.32	□□□□□ -0.28
MUC1-223	ENST00000611571	RIIAD1	A6NNX1	92 aa		13.32	□□□□□ -0.28
MUC1-223	ENST00000611571	RFPL2	O75678	378 aa		13.32	□□□□□ -0.28
MUC1-223	ENST00000611571	PTPN2	P17706	415 aa		13.32	□□□□□ -0.28
MUC1-223	ENST00000611571	HTR1B	P28222	390 aa		13.32	□□□□□ -0.28
MUC1-223	ENST00000611571	OMP	P47874	163 aa		13.32	□□□□□ -0.28
MUC1-223	ENST00000611571	SNRPD2	P62316	118 aa	Known RBP	13.32	□□□□□ -0.28
MUC1-223	ENST00000611571	UBE2U	Q5VVX9	321 aa		13.32	□□□□□ -0.28
MUC1-223	ENST00000611571	GRASP	Q7Z6J2	395 aa	Predicted RBP	13.32	□□□□□ -0.28
MUC1-223	ENST00000611571	OR4C6	Q8NH72	309 aa		13.32	□□□□□ -0.28
MUC1-223	ENST00000611571	ZNF583	Q96ND8	569 aa		13.32	□□□□□ -0.28
MUC1-223	ENST00000611571	ZSCAN5A	Q9BUG6	496 aa		13.32	□□□□□ -0.28
MUC1-223	ENST00000611571	C1QTNF7	Q9BXJ2	289 aa		13.32	□□□□□ -0.28
MUC1-223	ENST00000611571	DPEP2	Q9H4A9	486 aa		13.32	□□□□□ -0.28
MUC1-223	ENST00000611571	GMEB1	Q9Y692	573 aa		13.32	□□□□□ -0.28
MUC1-223	ENST00000611571	TOX	O94900	526 aa		13.32	□□□□□ -0.28
MUC1-223	ENST00000611571	KEL	P23276	732 aa		13.32	□□□□□ -0.28
MUC1-223	ENST00000611571	PTX3	P26022	381 aa	Predicted RBP	13.32	□□□□□ -0.28
MUC1-223	ENST00000611571	SPHAR	Q15513	63 aa		13.32	□□□□□ -0.28
MUC1-223	ENST00000611571	MINDY4	Q4G0A6	757 aa		13.32	□□□□□ -0.28
MUC1-223	ENST00000611571	RPS26P11	Q5JNZ5	115 aa	Predicted RBP	13.32	□□□□□ -0.28
MUC1-223	ENST00000611571	NCEH1	Q6PIU2	408 aa		13.32	□□□□□ -0.28
MUC1-223	ENST00000611571	CRTC1	Q6UUV9	634 aa		13.32	□□□□□ -0.28
MUC1-223	ENST00000611571	PRR23C	Q6ZRP0	262 aa		13.32	□□□□□ -0.28
MUC1-223	ENST00000611571	ARMCX6	Q7L4S7	300 aa		13.32	□□□□□ -0.28
MUC1-223	ENST00000611571	CPA6	Q8N4T0	437 aa		13.32	□□□□□ -0.28
MUC1-223	ENST00000611571	ZNF655	Q8N720	491 aa	Predicted RBP	13.32	□□□□□ -0.28
MUC1-223	ENST00000611571	FAM46D	Q8NEK8	389 aa		13.32	□□□□□ -0.28
MUC1-223	ENST00000611571	RFK	Q969G6	155 aa		13.32	□□□□□ -0.28
MUC1-223	ENST00000611571	TMEM27	Q9HBJ8	222 aa		13.32	□□□□□ -0.28
MUC1-223	ENST00000611571	CSNK1G1	Q9HCP0	422 aa		13.32	□□□□□ -0.28
MUC1-223	ENST00000611571	NFKBIL1	Q9UBC1	381 aa	Predicted RBP	13.32	□□□□□ -0.28
MUC1-223	ENST00000611571	INTS6	Q9UL03	887 aa	Known RBP	13.32	□□□□□ -0.28
MUC1-223	ENST00000611571	ASB1	Q9Y576	335 aa		13.32	□□□□□ -0.28
MUC1-223	ENST00000611571	TTC34	A8MYJ7	566 aa		13.32	□□□□□ -0.28
MUC1-223	ENST00000611571		J3QLW9	94 aa		13.32	□□□□□ -0.28
MUC1-223	ENST00000611571		M0QZQ0	153 aa		13.32	□□□□□ -0.28
MUC1-223	ENST00000611571	RPP14	O95059	124 aa	Known RBP	13.32	□□□□□ -0.28
MUC1-223	ENST00000611571	ZNF19	P17023	458 aa		13.32	□□□□□ -0.28
MUC1-223	ENST00000611571	CD72	P21854	359 aa		13.32	□□□□□ -0.28
MUC1-223	ENST00000611571	PIGA	P37287	484 aa		13.32	□□□□□ -0.28
MUC1-223	ENST00000611571	PGD	P52209	483 aa		13.32	□□□□□ -0.28
MUC1-223	ENST00000611571	ZNF155	Q12901	538 aa	Predicted RBP	13.32	□□□□□ -0.28
MUC1-223	ENST00000611571	SEMA3B	Q13214	749 aa		13.32	□□□□□ -0.28
MUC1-223	ENST00000611571	SLC30A6	Q6NXT4	461 aa		13.32	□□□□□ -0.28
MUC1-223	ENST00000611571	ZSWIM9	Q86XI8	627 aa		13.32	□□□□□ -0.28
MUC1-223	ENST00000611571	COX18	Q8N8Q8	333 aa		13.32	□□□□□ -0.28
MUC1-223	ENST00000611571	GATAD2B	Q8WXI9	593 aa		13.32	□□□□□ -0.28
MUC1-223	ENST00000611571	IGSF21	Q96ID5	467 aa		13.32	□□□□□ -0.28
MUC1-223	ENST00000611571	MACROD1	Q9BQ69	325 aa		13.32	□□□□□ -0.28
MUC1-223	ENST00000611571	ELL3	Q9HB65	397 aa	Predicted RBP	13.32	□□□□□ -0.28
MUC1-223	ENST00000611571	IL1RAP	Q9NPH3	570 aa		13.32	□□□□□ -0.28
MUC1-223	ENST00000611571	DNAJC13	O75165	2243 aa		13.31	□□□□□ -0.28
MUC1-223	ENST00000611571	GUCA1A	P43080	201 aa	Predicted RBP	13.31	□□□□□ -0.28
MUC1-223	ENST00000611571	TBPL1	P62380	186 aa		13.31	□□□□□ -0.28
MUC1-223	ENST00000611571	KLHL22	Q53GT1	634 aa		13.31	□□□□□ -0.28
MUC1-223	ENST00000611571	TPGS2	Q68CL5	300 aa		13.31	□□□□□ -0.28
MUC1-223	ENST00000611571	BRAT1	Q6PJG6	821 aa		13.31	□□□□□ -0.28
MUC1-223	ENST00000611571	FAM220A	Q7Z4H9	259 aa		13.31	□□□□□ -0.28
MUC1-223	ENST00000611571	PEX5L	Q8IYB4	626 aa		13.31	□□□□□ -0.28
MUC1-223	ENST00000611571	TRPV1	Q8NER1	839 aa		13.31	□□□□□ -0.28
MUC1-223	ENST00000611571	C9orf43	Q8TAL5	461 aa	Predicted RBP	13.31	□□□□□ -0.28
MUC1-223	ENST00000611571	CIDEC	Q96AQ7	238 aa	Predicted RBP	13.31	□□□□□ -0.28
MUC1-223	ENST00000611571	CAPNS2	Q96L46	248 aa		13.31	□□□□□ -0.28
MUC1-223	ENST00000611571	EIF3K	Q9UBQ5	218 aa	Known RBP	13.31	□□□□□ -0.28
MUC1-223	ENST00000611571	IL36A	Q9UHA7	158 aa		13.31	□□□□□ -0.28
MUC1-223	ENST00000611571	DPP7	Q9UHL4	492 aa		13.31	□□□□□ -0.28
MUC1-223	ENST00000611571		A0A1B0GVC2	190 aa		13.31	□□□□□ -0.28
MUC1-223	ENST00000611571		A0A1W2PQ45	241 aa	Predicted RBP	13.31	□□□□□ -0.28
MUC1-223	ENST00000611571		A0A1W2PQY0	241 aa		13.31	□□□□□ -0.28
MUC1-223	ENST00000611571	UBE2QL1	A1L167	161 aa		13.31	□□□□□ -0.28
MUC1-223	ENST00000611571		A6NIN4	97 aa		13.31	□□□□□ -0.28
MUC1-223	ENST00000611571	E2F3	O00716	465 aa		13.31	□□□□□ -0.28
MUC1-223	ENST00000611571	TSPAN4	O14817	238 aa		13.31	□□□□□ -0.28
MUC1-223	ENST00000611571	FRS3	O43559	492 aa		13.31	□□□□□ -0.28
MUC1-223	ENST00000611571	ALPL	P05186	524 aa		13.31	□□□□□ -0.28
MUC1-223	ENST00000611571	SBK3	P0C264	359 aa		13.31	□□□□□ -0.28
MUC1-223	ENST00000611571	VIPR1	P32241	457 aa		13.31	□□□□□ -0.28
MUC1-223	ENST00000611571	ACTR1B	P42025	376 aa		13.31	□□□□□ -0.28
MUC1-223	ENST00000611571	SLC9A3	P48764	834 aa		13.31	□□□□□ -0.28
MUC1-223	ENST00000611571	ACTR1A	P61163	376 aa		13.31	□□□□□ -0.28
MUC1-223	ENST00000611571	PIN1	Q13526	163 aa	Predicted RBP	13.31	□□□□□ -0.28
MUC1-223	ENST00000611571	ZNF630	Q2M218	657 aa	Predicted RBP	13.31	□□□□□ -0.28
MUC1-223	ENST00000611571	OR4E2	Q8NGC2	313 aa		13.31	□□□□□ -0.28
MUC1-223	ENST00000611571	NKD1	Q969G9	470 aa		13.31	□□□□□ -0.28
MUC1-223	ENST00000611571	MRPS30	Q9NP92	439 aa	Known RBP	13.31	□□□□□ -0.28
MUC1-223	ENST00000611571	DCAF13	Q9NV06	445 aa	Known RBP	13.31	□□□□□ -0.28
MUC1-223	ENST00000611571	P2RX2	Q9UBL9	471 aa		13.31	□□□□□ -0.28
MUC1-223	ENST00000611571	CTDSP2	O14595	271 aa		13.31	□□□□□ -0.28
MUC1-223	ENST00000611571	CHST10	O43529	356 aa		13.31	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms