RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 ANKRD34BA5PLL1 514 aa14.08□□□□□ -0.16
VPS36-207ENST00000611132 HSD3B1P14060 373 aa14.08□□□□□ -0.16
VPS36-207ENST00000611132 SDC1P18827 310 aa14.08□□□□□ -0.16
VPS36-207ENST00000611132 ACRV1P26436 265 aa14.08□□□□□ -0.16
VPS36-207ENST00000611132 HSD3B2P26439 372 aa14.08□□□□□ -0.16
VPS36-207ENST00000611132 TIA1P31483 386 aaKnown RBP eCLIP14.08□□□□□ -0.16
VPS36-207ENST00000611132 CAPZA2P47755 286 aa14.08□□□□□ -0.16
VPS36-207ENST00000611132 SELENOWP63302 87 aa14.08□□□□□ -0.16
VPS36-207ENST00000611132 GPRC6AQ5T6X5 926 aa14.08□□□□□ -0.16
VPS36-207ENST00000611132 HSDL2Q6YN16 418 aa14.08□□□□□ -0.16
VPS36-207ENST00000611132 IQCHQ86VS3 1027 aa14.08□□□□□ -0.16
VPS36-207ENST00000611132 PLCZ1Q86YW0 608 aa14.08□□□□□ -0.16
VPS36-207ENST00000611132 RAB8BQ92930 207 aa14.08□□□□□ -0.16
VPS36-207ENST00000611132 PPP1R16AQ96I34 528 aa14.08□□□□□ -0.16
VPS36-207ENST00000611132 MKRN2Q9H000 416 aaKnown RBP14.08□□□□□ -0.16
VPS36-207ENST00000611132 TRIM36Q9NQ86 728 aa14.08□□□□□ -0.16
VPS36-207ENST00000611132 PCDH10Q9P2E7 1040 aa14.08□□□□□ -0.16
VPS36-207ENST00000611132 A3GALT2U3KPV4 340 aa14.08□□□□□ -0.16
VPS36-207ENST00000611132 KDM4BO94953 1096 aa14.07□□□□□ -0.16
VPS36-207ENST00000611132 ADAP00813 363 aa14.07□□□□□ -0.16
VPS36-207ENST00000611132 DNASE1P24855 282 aa14.07□□□□□ -0.16
VPS36-207ENST00000611132 KCNC3Q14003 757 aa14.07□□□□□ -0.16
VPS36-207ENST00000611132 BTG3Q14201 252 aaPredicted RBP14.07□□□□□ -0.16
VPS36-207ENST00000611132 PRSS55Q6UWB4 352 aaPredicted RBP14.07□□□□□ -0.16
VPS36-207ENST00000611132 CHMP1BQ7LBR1 199 aa14.07□□□□□ -0.16
VPS36-207ENST00000611132 TMEM151AQ8N4L1 468 aa14.07□□□□□ -0.16
VPS36-207ENST00000611132 FBXO22Q8NEZ5 403 aa14.07□□□□□ -0.16
VPS36-207ENST00000611132 FUZQ9BT04 418 aa14.07□□□□□ -0.16
VPS36-207ENST00000611132 LMAN2LQ9H0V9 348 aa14.07□□□□□ -0.16
VPS36-207ENST00000611132 NEUROD4Q9HD90 331 aa14.07□□□□□ -0.16
VPS36-207ENST00000611132 NPAP1Q9NZP6 1156 aa14.07□□□□□ -0.16
VPS36-207ENST00000611132 UGT2A1Q9Y4X1 527 aa14.07□□□□□ -0.16
VPS36-207ENST00000611132 STON1Q9Y6Q2 735 aa14.07□□□□□ -0.16
VPS36-207ENST00000611132 ENPP4Q9Y6X5 453 aa14.07□□□□□ -0.16
VPS36-207ENST00000611132 OR1F1O43749 312 aa14.07□□□□□ -0.16
VPS36-207ENST00000611132 SERPINA3P01011 423 aa14.07□□□□□ -0.16
VPS36-207ENST00000611132 RPL17P18621 184 aaKnown RBP14.07□□□□□ -0.16
VPS36-207ENST00000611132 PPP2R2BQ00005 443 aa14.07□□□□□ -0.16
VPS36-207ENST00000611132 CTU2Q2VPK5 515 aaKnown RBP14.07□□□□□ -0.16
VPS36-207ENST00000611132 GARNL3Q5VVW2 1013 aa14.07□□□□□ -0.16
VPS36-207ENST00000611132 TMEM207Q6UWW9 146 aa14.07□□□□□ -0.16
VPS36-207ENST00000611132 CBLL1Q75N03 491 aa14.07□□□□□ -0.16
VPS36-207ENST00000611132 SAMD12Q8N8I0 201 aa14.07□□□□□ -0.16
VPS36-207ENST00000611132 OR4C6Q8NH72 309 aa14.07□□□□□ -0.16
VPS36-207ENST00000611132 MGME1Q9BQP7 344 aa14.07□□□□□ -0.16
VPS36-207ENST00000611132 LYRM1O43325 122 aa14.07□□□□□ -0.16
VPS36-207ENST00000611132 RB1P06400 928 aa14.07□□□□□ -0.16
VPS36-207ENST00000611132 ASGR1P07306 291 aa14.07□□□□□ -0.16
VPS36-207ENST00000611132 ATXN1LP0C7T5 689 aaKnown RBP14.07□□□□□ -0.16
VPS36-207ENST00000611132 PRKACBP22694 351 aa14.07□□□□□ -0.16
VPS36-207ENST00000611132 F8A1P23610 371 aa14.07□□□□□ -0.16
VPS36-207ENST00000611132 UQCRC1P31930 480 aa14.07□□□□□ -0.16
VPS36-207ENST00000611132 MNDAP41218 407 aa14.07□□□□□ -0.16
VPS36-207ENST00000611132 ZNF140P52738 457 aaPredicted RBP14.07□□□□□ -0.16
VPS36-207ENST00000611132 RNF44Q7L0R7 432 aa14.07□□□□□ -0.16
VPS36-207ENST00000611132 SLC46A3Q7Z3Q1 461 aa14.07□□□□□ -0.16
VPS36-207ENST00000611132 OAFQ86UD1 273 aa14.07□□□□□ -0.16
VPS36-207ENST00000611132 LRRTM3Q86VH5 581 aa14.07□□□□□ -0.16
VPS36-207ENST00000611132 DNAJC22Q8N4W6 341 aa14.07□□□□□ -0.16
VPS36-207ENST00000611132 LRR1Q96L50 414 aa14.07□□□□□ -0.16
VPS36-207ENST00000611132 ZNF300Q96RE9 604 aaPredicted RBP14.07□□□□□ -0.16
VPS36-207ENST00000611132 CPPED1Q9BRF8 314 aaPredicted RBP14.07□□□□□ -0.16
VPS36-207ENST00000611132 BOCQ9BWV1 1114 aa14.07□□□□□ -0.16
VPS36-207ENST00000611132 RGS17Q9UGC6 210 aaPredicted RBP14.07□□□□□ -0.16
VPS36-207ENST00000611132 NEDD8-MDP1E9PL57 170 aa14.07□□□□□ -0.16
VPS36-207ENST00000611132 M0R129 80 aa14.07□□□□□ -0.16
VPS36-207ENST00000611132 OR7A10O76100 309 aa14.07□□□□□ -0.16
VPS36-207ENST00000611132 ALPPP05187 535 aa14.07□□□□□ -0.16
VPS36-207ENST00000611132 SOX3P41225 446 aa14.07□□□□□ -0.16
VPS36-207ENST00000611132 AVPR1BP47901 424 aa14.07□□□□□ -0.16
VPS36-207ENST00000611132 SLC35A2P78381 396 aa14.07□□□□□ -0.16
VPS36-207ENST00000611132 AQP6Q13520 282 aa14.07□□□□□ -0.16
VPS36-207ENST00000611132 PLEKHS1Q5SXH7 462 aa14.07□□□□□ -0.16
VPS36-207ENST00000611132 PAMR1Q6UXH9 720 aa14.07□□□□□ -0.16
VPS36-207ENST00000611132 PSD4Q8NDX1 1056 aa14.07□□□□□ -0.16
VPS36-207ENST00000611132 CCDC3Q9BQI4 270 aa14.07□□□□□ -0.16
VPS36-207ENST00000611132 BEX1Q9HBH7 125 aa14.07□□□□□ -0.16
VPS36-207ENST00000611132 OR6A2O95222 327 aa14.06□□□□□ -0.16
VPS36-207ENST00000611132 PSMA3P25788 255 aa14.06□□□□□ -0.16
VPS36-207ENST00000611132 BDKRB1P46663 353 aa14.06□□□□□ -0.16
VPS36-207ENST00000611132 TSPAN5P62079 268 aa14.06□□□□□ -0.16
VPS36-207ENST00000611132 RGNQ15493 299 aa14.06□□□□□ -0.16
VPS36-207ENST00000611132 AKIRIN2Q53H80 203 aa14.06□□□□□ -0.16
VPS36-207ENST00000611132 UBXN11Q5T124 520 aa14.06□□□□□ -0.16
VPS36-207ENST00000611132 ANKRD54Q6NXT1 300 aa14.06□□□□□ -0.16
VPS36-207ENST00000611132 CACUL1Q86Y37 369 aa14.06□□□□□ -0.16
VPS36-207ENST00000611132 NAGSQ8N159 534 aa14.06□□□□□ -0.16
VPS36-207ENST00000611132 DCAF4L2Q8NA75 395 aa14.06□□□□□ -0.16
VPS36-207ENST00000611132 SGCDQ92629 289 aa14.06□□□□□ -0.16
VPS36-207ENST00000611132 IFT27Q9BW83 186 aa14.06□□□□□ -0.16
VPS36-207ENST00000611132 TCRBV5S2A0A599 114 aa14.06□□□□□ -0.16
VPS36-207ENST00000611132 FZD9O00144 591 aa14.06□□□□□ -0.16
VPS36-207ENST00000611132 SCAMP2O15127 329 aaKnown RBP14.06□□□□□ -0.16
VPS36-207ENST00000611132 SEPT4O43236 478 aa14.06□□□□□ -0.16
VPS36-207ENST00000611132 CHRNB1P11230 501 aa14.06□□□□□ -0.16
VPS36-207ENST00000611132 RPS5P46782 204 aaKnown RBP14.06□□□□□ -0.16
VPS36-207ENST00000611132 CCR4P51679 360 aa14.06□□□□□ -0.16
VPS36-207ENST00000611132 GTF2IRD2BQ6EKJ0 949 aa14.06□□□□□ -0.16
VPS36-207ENST00000611132 SLC27A4Q6P1M0 643 aa14.06□□□□□ -0.16
VPS36-207ENST00000611132 NHSQ6T4R5 1651 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms