RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 APOOQ9BUR5 198 aa13□□□□□ -0.33
NEK3-205ENST00000610828 CXorf21Q9HAI6 301 aa13□□□□□ -0.33
NEK3-205ENST00000610828 C1GALT1Q9NS00 363 aa13□□□□□ -0.33
NEK3-205ENST00000610828 THUMPD1Q9NXG2 353 aaKnown RBP13□□□□□ -0.33
NEK3-205ENST00000610828 C5AR2Q9P296 337 aa13□□□□□ -0.33
NEK3-205ENST00000610828 HEATR5BQ9P2D3 2071 aa13□□□□□ -0.33
NEK3-205ENST00000610828 A0A0G2JN53 185 aa12.99□□□□□ -0.33
NEK3-205ENST00000610828 TMEM229AB2RXF0 380 aa12.99□□□□□ -0.33
NEK3-205ENST00000610828 CACNB4O00305 520 aaPredicted RBP12.99□□□□□ -0.33
NEK3-205ENST00000610828 SLC16A6O15403 523 aa12.99□□□□□ -0.33
NEK3-205ENST00000610828 NDUFS4O43181 175 aa12.99□□□□□ -0.33
NEK3-205ENST00000610828 TNFRSF1BP20333 461 aa12.99□□□□□ -0.33
NEK3-205ENST00000610828 COL9A1P20849 921 aa12.99□□□□□ -0.33
NEK3-205ENST00000610828 AGXTP21549 392 aa12.99□□□□□ -0.33
NEK3-205ENST00000610828 ISL1P61371 349 aa12.99□□□□□ -0.33
NEK3-205ENST00000610828 CSNK1G2P78368 415 aa12.99□□□□□ -0.33
NEK3-205ENST00000610828 PRDX1Q06830 199 aaKnown RBP12.99□□□□□ -0.33
NEK3-205ENST00000610828 ADAM15Q13444 863 aa12.99□□□□□ -0.33
NEK3-205ENST00000610828 RAPSNQ13702 412 aa12.99□□□□□ -0.33
NEK3-205ENST00000610828 HEPACAMQ14CZ8 416 aa12.99□□□□□ -0.33
NEK3-205ENST00000610828 BROXQ5VW32 411 aa12.99□□□□□ -0.33
NEK3-205ENST00000610828 KDM4DQ6B0I6 523 aa12.99□□□□□ -0.33
NEK3-205ENST00000610828 NUDT13Q86X67 352 aa12.99□□□□□ -0.33
NEK3-205ENST00000610828 FAM20CQ8IXL6 584 aa12.99□□□□□ -0.33
NEK3-205ENST00000610828 ALDH16A1Q8IZ83 802 aa12.99□□□□□ -0.33
NEK3-205ENST00000610828 ATG16L2Q8NAA4 619 aa12.99□□□□□ -0.33
NEK3-205ENST00000610828 OR2A1Q8NGT9 310 aa12.99□□□□□ -0.33
NEK3-205ENST00000610828 SGCDQ92629 289 aa12.99□□□□□ -0.33
NEK3-205ENST00000610828 ISOC1Q96CN7 298 aa12.99□□□□□ -0.33
NEK3-205ENST00000610828 RIPOR3Q96MK2 946 aa12.99□□□□□ -0.33
NEK3-205ENST00000610828 TMEM38AQ9H6F2 299 aa12.99□□□□□ -0.33
NEK3-205ENST00000610828 RMI1Q9H9A7 625 aa12.99□□□□□ -0.33
NEK3-205ENST00000610828 PRDM8Q9NQV8 689 aa12.99□□□□□ -0.33
NEK3-205ENST00000610828 EBF1Q9UH73 591 aa12.99□□□□□ -0.33
NEK3-205ENST00000610828 CDC14AQ9UNH5 594 aa12.99□□□□□ -0.33
NEK3-205ENST00000610828 ICKQ9UPZ9 632 aa12.99□□□□□ -0.33
NEK3-205ENST00000610828 AP1M2Q9Y6Q5 423 aa12.99□□□□□ -0.33
NEK3-205ENST00000610828 IGKV1-8A0A0C4DH67 115 aa12.99□□□□□ -0.33
NEK3-205ENST00000610828 PRAMEF33A0A0G2JMD5 474 aa12.99□□□□□ -0.33
NEK3-205ENST00000610828 A0A1W2PQF6 199 aa12.99□□□□□ -0.33
NEK3-205ENST00000610828 KLF8O95600 359 aaPredicted RBP12.99□□□□□ -0.33
NEK3-205ENST00000610828 KRT75O95678 551 aa12.99□□□□□ -0.33
NEK3-205ENST00000610828 EGFP01133 1207 aa12.99□□□□□ -0.33
NEK3-205ENST00000610828 SERPINB1P30740 379 aa12.99□□□□□ -0.33
NEK3-205ENST00000610828 MANFP55145 182 aaKnown RBP12.99□□□□□ -0.33
NEK3-205ENST00000610828 PPP2CBP62714 309 aa12.99□□□□□ -0.33
NEK3-205ENST00000610828 PPP2CAP67775 309 aa12.99□□□□□ -0.33
NEK3-205ENST00000610828 CDK6Q00534 326 aa12.99□□□□□ -0.33
NEK3-205ENST00000610828 IL5RAQ01344 420 aa12.99□□□□□ -0.33
NEK3-205ENST00000610828 RBBP4Q09028 425 aa12.99□□□□□ -0.33
NEK3-205ENST00000610828 DYNC1I2Q13409 638 aaKnown RBP12.99□□□□□ -0.33
NEK3-205ENST00000610828 TCEA2Q15560 299 aa12.99□□□□□ -0.33
NEK3-205ENST00000610828 IQCCQ4KMZ1 466 aa12.99□□□□□ -0.33
NEK3-205ENST00000610828 OR52E1Q8NGJ3 308 aa12.99□□□□□ -0.33
NEK3-205ENST00000610828 RGMAQ96B86 450 aa12.99□□□□□ -0.33
NEK3-205ENST00000610828 NLNQ9BYT8 704 aa12.99□□□□□ -0.33
NEK3-205ENST00000610828 PITHD1Q9GZP4 211 aaPredicted RBP12.99□□□□□ -0.33
NEK3-205ENST00000610828 CXorf36Q9H7Y0 433 aa12.99□□□□□ -0.33
NEK3-205ENST00000610828 SLAMF7Q9NQ25 335 aa12.99□□□□□ -0.33
NEK3-205ENST00000610828 LHX9Q9NQ69 397 aa12.99□□□□□ -0.33
NEK3-205ENST00000610828 BLOC1S6Q9UL45 172 aa12.99□□□□□ -0.33
NEK3-205ENST00000610828 PADI2Q9Y2J8 665 aa12.99□□□□□ -0.33
NEK3-205ENST00000610828 GOLGA4Q13439 2230 aaKnown RBP12.98□□□□□ -0.33
NEK3-205ENST00000610828 ITGAMP11215 1152 aa12.98□□□□□ -0.33
NEK3-205ENST00000610828 UQCRC2P22695 453 aa12.98□□□□□ -0.33
NEK3-205ENST00000610828 RRM2P31350 389 aa12.98□□□□□ -0.33
NEK3-205ENST00000610828 CTHP32929 405 aa12.98□□□□□ -0.33
NEK3-205ENST00000610828 OR1E2P47887 323 aa12.98□□□□□ -0.33
NEK3-205ENST00000610828 PLA2G16P53816 162 aa12.98□□□□□ -0.33
NEK3-205ENST00000610828 MTSS1LQ765P7 747 aa12.98□□□□□ -0.33
NEK3-205ENST00000610828 TAMM41Q96BW9 452 aa12.98□□□□□ -0.33
NEK3-205ENST00000610828 NRBF2Q96F24 287 aa12.98□□□□□ -0.33
NEK3-205ENST00000610828 QRFPRQ96P65 431 aa12.98□□□□□ -0.33
NEK3-205ENST00000610828 RAD21L1Q9H4I0 556 aa12.98□□□□□ -0.33
NEK3-205ENST00000610828 NT5DC2Q9H857 520 aa12.98□□□□□ -0.33
NEK3-205ENST00000610828 FGF22Q9HCT0 170 aa12.98□□□□□ -0.33
NEK3-205ENST00000610828 KRT84Q9NSB2 600 aa12.98□□□□□ -0.33
NEK3-205ENST00000610828 M0QX08 132 aa12.98□□□□□ -0.33
NEK3-205ENST00000610828 PDPK1O15530 556 aa12.98□□□□□ -0.33
NEK3-205ENST00000610828 TMPRSS11DO60235 418 aa12.98□□□□□ -0.33
NEK3-205ENST00000610828 UGT2B11O75310 529 aa12.98□□□□□ -0.33
NEK3-205ENST00000610828 C9P02748 559 aa12.98□□□□□ -0.33
NEK3-205ENST00000610828 STATHP02808 62 aa12.98□□□□□ -0.33
NEK3-205ENST00000610828 PKLRP30613 574 aa12.98□□□□□ -0.33
NEK3-205ENST00000610828 TTKP33981 857 aa12.98□□□□□ -0.33
NEK3-205ENST00000610828 CTBSQ01459 385 aa12.98□□□□□ -0.33
NEK3-205ENST00000610828 HSPB3Q12988 150 aa12.98□□□□□ -0.33
NEK3-205ENST00000610828 IL18R1Q13478 541 aa12.98□□□□□ -0.33
NEK3-205ENST00000610828 UAP1L1Q3KQV9 507 aa12.98□□□□□ -0.33
NEK3-205ENST00000610828 CYP27C1Q4G0S4 372 aa12.98□□□□□ -0.33
NEK3-205ENST00000610828 GPR107Q5VW38 600 aa12.98□□□□□ -0.33
NEK3-205ENST00000610828 ERI1Q8IV48 349 aaKnown RBP12.98□□□□□ -0.33
NEK3-205ENST00000610828 OR2L8Q8NGY9 312 aa12.98□□□□□ -0.33
NEK3-205ENST00000610828 CNIH3Q8TBE1 160 aa12.98□□□□□ -0.33
NEK3-205ENST00000610828 LZICQ8WZA0 190 aa12.98□□□□□ -0.33
NEK3-205ENST00000610828 FAM131CQ96AQ9 280 aa12.98□□□□□ -0.33
NEK3-205ENST00000610828 EXOSC8Q96B26 276 aaKnown RBP12.98□□□□□ -0.33
NEK3-205ENST00000610828 SIPA1Q96FS4 1042 aa12.98□□□□□ -0.33
NEK3-205ENST00000610828 C17orf62Q9BQA9 187 aa12.98□□□□□ -0.33
NEK3-205ENST00000610828 RAB11FIP5Q9BXF6 653 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms