RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 NLRP8Q86W28 1048 aa19.54■□□□□ 0.72
SSBP3-216ENST00000610401 ADAMTS19Q8TE59 1207 aa19.54■□□□□ 0.72
SSBP3-216ENST00000610401 PRR14Q9BWN1 585 aa19.54■□□□□ 0.72
SSBP3-216ENST00000610401 NMNAT1Q9HAN9 279 aaPredicted RBP19.54■□□□□ 0.72
SSBP3-216ENST00000610401 RANGRFQ9HD47 186 aaPredicted RBP19.54■□□□□ 0.72
SSBP3-216ENST00000610401 TVP23BQ9NYZ1 205 aa19.54■□□□□ 0.72
SSBP3-216ENST00000610401 TBC1D24Q9ULP9 559 aa19.54■□□□□ 0.72
SSBP3-216ENST00000610401 ERVW-1Q9UQF0 538 aa19.54■□□□□ 0.72
SSBP3-216ENST00000610401 A0A1W2PRU2 124 aa19.54■□□□□ 0.72
SSBP3-216ENST00000610401 PLD2O14939 933 aa19.54■□□□□ 0.72
SSBP3-216ENST00000610401 PQBP1O60828 265 aaKnown RBP19.54■□□□□ 0.72
SSBP3-216ENST00000610401 BCHEP06276 602 aa19.54■□□□□ 0.72
SSBP3-216ENST00000610401 NFE2L1Q14494 772 aa19.54■□□□□ 0.72
SSBP3-216ENST00000610401 PRSS53Q2L4Q9 553 aa19.54■□□□□ 0.72
SSBP3-216ENST00000610401 AGAP6Q5VW22 663 aa19.54■□□□□ 0.72
SSBP3-216ENST00000610401 ZNF517Q6ZMY9 492 aaPredicted RBP19.54■□□□□ 0.72
SSBP3-216ENST00000610401 ELMOD1Q8N336 334 aa19.54■□□□□ 0.72
SSBP3-216ENST00000610401 UBTD2Q8WUN7 234 aa19.54■□□□□ 0.72
SSBP3-216ENST00000610401 OTULINQ96BN8 352 aa19.54■□□□□ 0.72
SSBP3-216ENST00000610401 COQ8BQ96D53 544 aa19.54■□□□□ 0.72
SSBP3-216ENST00000610401 AGAP4Q96P64 663 aa19.54■□□□□ 0.72
SSBP3-216ENST00000610401 CITED4Q96RK1 184 aa19.54■□□□□ 0.72
SSBP3-216ENST00000610401 EPYCQ99645 322 aa19.54■□□□□ 0.72
SSBP3-216ENST00000610401 PITX2Q99697 317 aa19.54■□□□□ 0.72
SSBP3-216ENST00000610401 POLR2J2Q9GZM3 115 aaKnown RBP19.54■□□□□ 0.72
SSBP3-216ENST00000610401 SPNS1Q9H2V7 528 aa19.54■□□□□ 0.72
SSBP3-216ENST00000610401 PEX16Q9Y5Y5 336 aa19.54■□□□□ 0.72
SSBP3-216ENST00000610401 A0A1W2PQ09 198 aa19.54■□□□□ 0.72
SSBP3-216ENST00000610401 CDRT1O95170 752 aa19.54■□□□□ 0.72
SSBP3-216ENST00000610401 SEMG1P04279 462 aa19.54■□□□□ 0.72
SSBP3-216ENST00000610401 SERPIND1P05546 499 aa19.54■□□□□ 0.72
SSBP3-216ENST00000610401 HSPB3Q12988 150 aa19.54■□□□□ 0.72
SSBP3-216ENST00000610401 MTAPQ13126 283 aa19.54■□□□□ 0.72
SSBP3-216ENST00000610401 GCNT6Q5T4J0 391 aa19.54■□□□□ 0.72
SSBP3-216ENST00000610401 L3MBTL4Q8NA19 623 aa19.54■□□□□ 0.72
SSBP3-216ENST00000610401 SYT14Q8NB59 555 aa19.54■□□□□ 0.72
SSBP3-216ENST00000610401 SCRN2Q96FV2 425 aa19.54■□□□□ 0.72
SSBP3-216ENST00000610401 TTLL2Q9BWV7 592 aa19.54■□□□□ 0.72
SSBP3-216ENST00000610401 ASIC5Q9NY37 505 aa19.54■□□□□ 0.72
SSBP3-216ENST00000610401 HNRNPFP52597 415 aaKnown RBP19.53■□□□□ 0.72
SSBP3-216ENST00000610401 HOXC5Q00444 222 aa19.53■□□□□ 0.72
SSBP3-216ENST00000610401 ZNF45Q02386 682 aa19.53■□□□□ 0.72
SSBP3-216ENST00000610401 CNTN1Q12860 1018 aa19.53■□□□□ 0.72
SSBP3-216ENST00000610401 C22orf42Q6IC83 251 aa19.53■□□□□ 0.72
SSBP3-216ENST00000610401 TRAF7Q6Q0C0 670 aa19.53■□□□□ 0.72
SSBP3-216ENST00000610401 CCDC80Q76M96 950 aa19.53■□□□□ 0.72
SSBP3-216ENST00000610401 TMEM150AQ86TG1 271 aa19.53■□□□□ 0.72
SSBP3-216ENST00000610401 EXO1Q9UQ84 846 aaKnown RBP19.53■□□□□ 0.72
SSBP3-216ENST00000610401 SYNDIG1LA6NDD5 238 aa19.53■□□□□ 0.72
SSBP3-216ENST00000610401 NEDD8-MDP1E9PL57 170 aa19.53■□□□□ 0.72
SSBP3-216ENST00000610401 CCRL2O00421 344 aa19.53■□□□□ 0.72
SSBP3-216ENST00000610401 C8GP07360 202 aa19.53■□□□□ 0.72
SSBP3-216ENST00000610401 HLA-FP30511 346 aa19.53■□□□□ 0.72
SSBP3-216ENST00000610401 SNRPD2P62316 118 aaKnown RBP19.53■□□□□ 0.72
SSBP3-216ENST00000610401 TMPRSS11AQ6ZMR5 421 aa19.53■□□□□ 0.72
SSBP3-216ENST00000610401 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.53■□□□□ 0.72
SSBP3-216ENST00000610401 COMMD6Q7Z4G1 85 aa19.53■□□□□ 0.72
SSBP3-216ENST00000610401 MMAAQ8IVH4 418 aaKnown RBP19.53■□□□□ 0.72
SSBP3-216ENST00000610401 CLP1Q92989 425 aaKnown RBP19.53■□□□□ 0.72
SSBP3-216ENST00000610401 SIGLEC11Q96RL6 698 aa19.53■□□□□ 0.72
SSBP3-216ENST00000610401 YIPF4Q9BSR8 244 aa19.53■□□□□ 0.72
SSBP3-216ENST00000610401 ZDHHC4Q9NPG8 344 aa19.53■□□□□ 0.72
SSBP3-216ENST00000610401 STOX2Q9P2F5 926 aaPredicted RBP19.53■□□□□ 0.72
SSBP3-216ENST00000610401 TRAV19A0A0A6YYK7 116 aa19.52■□□□□ 0.72
SSBP3-216ENST00000610401 ISPDA4D126 451 aa19.52■□□□□ 0.72
SSBP3-216ENST00000610401 CENPXA8MT69 81 aa19.52■□□□□ 0.72
SSBP3-216ENST00000610401 SMLR1H3BR10 107 aa19.52■□□□□ 0.72
SSBP3-216ENST00000610401 NTN1O95631 604 aa19.52■□□□□ 0.72
SSBP3-216ENST00000610401 PTTG1O95997 202 aa19.52■□□□□ 0.72
SSBP3-216ENST00000610401 S100A1P23297 94 aa19.52■□□□□ 0.72
SSBP3-216ENST00000610401 SLBPQ14493 270 aaKnown RBP eCLIP19.52■□□□□ 0.72
SSBP3-216ENST00000610401 GALNT12Q8IXK2 581 aa19.52■□□□□ 0.72
SSBP3-216ENST00000610401 PCSK9Q8NBP7 692 aaKnown RBP19.52■□□□□ 0.72
SSBP3-216ENST00000610401 OR8J2Q8NGG1 315 aa19.52■□□□□ 0.72
SSBP3-216ENST00000610401 FCGR1BQ92637 280 aa19.52■□□□□ 0.72
SSBP3-216ENST00000610401 PPCDCQ96CD2 204 aa19.52■□□□□ 0.72
SSBP3-216ENST00000610401 PHOX2BQ99453 314 aa19.52■□□□□ 0.72
SSBP3-216ENST00000610401 SMURF1Q9HCE7 757 aa19.52■□□□□ 0.72
SSBP3-216ENST00000610401 ACER3Q9NUN7 267 aa19.52■□□□□ 0.72
SSBP3-216ENST00000610401 CLN6Q9NWW5 311 aa19.52■□□□□ 0.72
SSBP3-216ENST00000610401 GPR52Q9Y2T5 361 aa19.52■□□□□ 0.72
SSBP3-216ENST00000610401 ANKRD34BA5PLL1 514 aa19.52■□□□□ 0.72
SSBP3-216ENST00000610401 TMCC2O75069 709 aa19.52■□□□□ 0.72
SSBP3-216ENST00000610401 SPINT3P49223 89 aa19.52■□□□□ 0.72
SSBP3-216ENST00000610401 PRKAG1P54619 331 aa19.52■□□□□ 0.72
SSBP3-216ENST00000610401 TCEA2Q15560 299 aa19.52■□□□□ 0.72
SSBP3-216ENST00000610401 ARMCX6Q7L4S7 300 aa19.52■□□□□ 0.72
SSBP3-216ENST00000610401 CFAP206Q8IYR0 622 aa19.52■□□□□ 0.72
SSBP3-216ENST00000610401 DEPDC4Q8N2C3 294 aa19.52■□□□□ 0.72
SSBP3-216ENST00000610401 ZNF461Q8TAF7 563 aa19.52■□□□□ 0.72
SSBP3-216ENST00000610401 GFM1Q96RP9 751 aaKnown RBP19.52■□□□□ 0.72
SSBP3-216ENST00000610401 CWH43Q9H720 699 aa19.52■□□□□ 0.72
SSBP3-216ENST00000610401 MIEF1Q9NQG6 463 aa19.52■□□□□ 0.72
SSBP3-216ENST00000610401 POFUT2Q9Y2G5 429 aa19.52■□□□□ 0.72
SSBP3-216ENST00000610401 SNX11Q9Y5W9 270 aa19.52■□□□□ 0.72
SSBP3-216ENST00000610401 TLX2O43763 284 aaPredicted RBP19.52■□□□□ 0.71
SSBP3-216ENST00000610401 CDC20Q12834 499 aa19.52■□□□□ 0.71
SSBP3-216ENST00000610401 KIAA1958Q8N8K9 716 aa19.52■□□□□ 0.71
SSBP3-216ENST00000610401 DNAJB8Q8NHS0 232 aa19.52■□□□□ 0.71
SSBP3-216ENST00000610401 WDR20Q8TBZ3 569 aa19.52■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms