RNA–Protein interactions for RNA: ENST00000609477.5

HDDC2-209, Transcript of HD domain containing 2, humanhuman

TSL 4

Gene HDDC2, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-209ENST00000609477 F2RL3Q96RI0 385 aa13.45□□□□□ -0.26
HDDC2-209ENST00000609477 NUDT9Q9BW91 350 aa13.45□□□□□ -0.26
HDDC2-209ENST00000609477 ZNF552Q9H707 407 aaPredicted RBP13.45□□□□□ -0.26
HDDC2-209ENST00000609477 SEMA4BQ9NPR2 832 aaPredicted RBP13.45□□□□□ -0.26
HDDC2-209ENST00000609477 DMRT3Q9NQL9 472 aa13.45□□□□□ -0.26
HDDC2-209ENST00000609477 PRDM9Q9NQV7 894 aa13.45□□□□□ -0.26
HDDC2-209ENST00000609477 ZNF71Q9NQZ8 489 aaPredicted RBP13.45□□□□□ -0.26
HDDC2-209ENST00000609477 MS4A12Q9NXJ0 267 aa13.45□□□□□ -0.26
HDDC2-209ENST00000609477 SENP1Q9P0U3 644 aa13.45□□□□□ -0.26
HDDC2-209ENST00000609477 DAPP1Q9UN19 280 aa13.45□□□□□ -0.26
HDDC2-209ENST00000609477 RNF11Q9Y3C5 154 aa13.45□□□□□ -0.26
HDDC2-209ENST00000609477 SPACA6W5XKT8 324 aa13.45□□□□□ -0.26
HDDC2-209ENST00000609477 A6NL46 340 aa13.44□□□□□ -0.26
HDDC2-209ENST00000609477 SMIM23A6NLE4 172 aa13.44□□□□□ -0.26
HDDC2-209ENST00000609477 C4orf51C9J302 202 aa13.44□□□□□ -0.26
HDDC2-209ENST00000609477 SUV39H1O43463 412 aa13.44□□□□□ -0.26
HDDC2-209ENST00000609477 SUPT7LO94864 414 aa13.44□□□□□ -0.26
HDDC2-209ENST00000609477 SEMA3DO95025 777 aa13.44□□□□□ -0.26
HDDC2-209ENST00000609477 TGFB1P01137 390 aa13.44□□□□□ -0.26
HDDC2-209ENST00000609477 SERPINA7P05543 415 aa13.44□□□□□ -0.26
HDDC2-209ENST00000609477 MYL2P10916 166 aa13.44□□□□□ -0.26
HDDC2-209ENST00000609477 HIST1H1TP22492 207 aaPredicted RBP13.44□□□□□ -0.26
HDDC2-209ENST00000609477 ARL1P40616 181 aaPredicted RBP13.44□□□□□ -0.26
HDDC2-209ENST00000609477 DNAJB13P59910 316 aa13.44□□□□□ -0.26
HDDC2-209ENST00000609477 IFT88Q13099 833 aa13.44□□□□□ -0.26
HDDC2-209ENST00000609477 ABRAXAS2Q15018 415 aa13.44□□□□□ -0.26
HDDC2-209ENST00000609477 PCOLCEQ15113 449 aa13.44□□□□□ -0.26
HDDC2-209ENST00000609477 ZRSR2Q15696 482 aaKnown RBP13.44□□□□□ -0.26
HDDC2-209ENST00000609477 EXT1Q16394 746 aa13.44□□□□□ -0.26
HDDC2-209ENST00000609477 FRG2Q64ET8 278 aa13.44□□□□□ -0.26
HDDC2-209ENST00000609477 OR4C11Q6IEV9 310 aa13.44□□□□□ -0.26
HDDC2-209ENST00000609477 ADNP2Q6IQ32 1131 aa13.44□□□□□ -0.26
HDDC2-209ENST00000609477 ZYG11AQ6WRX3 759 aa13.44□□□□□ -0.26
HDDC2-209ENST00000609477 ANKRD37Q7Z713 158 aa13.44□□□□□ -0.26
HDDC2-209ENST00000609477 ZNF605Q86T29 641 aa13.44□□□□□ -0.26
HDDC2-209ENST00000609477 TRABD2AQ86V40 505 aa13.44□□□□□ -0.26
HDDC2-209ENST00000609477 TEX19Q8NA77 164 aa13.44□□□□□ -0.26
HDDC2-209ENST00000609477 C8orf44Q96CB5 159 aa13.44□□□□□ -0.26
HDDC2-209ENST00000609477 IMMP1LQ96LU5 166 aa13.44□□□□□ -0.26
HDDC2-209ENST00000609477 FRG2BQ96QU4 278 aa13.44□□□□□ -0.26
HDDC2-209ENST00000609477 LMF1Q96S06 567 aa13.44□□□□□ -0.26
HDDC2-209ENST00000609477 ZNF382Q96SR6 550 aa13.44□□□□□ -0.26
HDDC2-209ENST00000609477 MTERF1Q99551 399 aaKnown RBP13.44□□□□□ -0.26
HDDC2-209ENST00000609477 SERPINI1Q99574 410 aa13.44□□□□□ -0.26
HDDC2-209ENST00000609477 IQCGQ9H095 443 aaKnown RBP13.44□□□□□ -0.26
HDDC2-209ENST00000609477 BRF2Q9HAW0 419 aa13.44□□□□□ -0.26
HDDC2-209ENST00000609477 ZNF160Q9HCG1 818 aa13.44□□□□□ -0.26
HDDC2-209ENST00000609477 PRM3Q9NNZ6 103 aa13.44□□□□□ -0.26
HDDC2-209ENST00000609477 NMRK1Q9NWW6 199 aa13.44□□□□□ -0.26
HDDC2-209ENST00000609477 TRPS1Q9UHF7 1281 aa13.44□□□□□ -0.26
HDDC2-209ENST00000609477 SNX6Q9UNH7 406 aa13.44□□□□□ -0.26
HDDC2-209ENST00000609477 CCDC151A5D8V7 595 aa13.43□□□□□ -0.26
HDDC2-209ENST00000609477 G3V2L1 256 aa13.43□□□□□ -0.26
HDDC2-209ENST00000609477 CDK2AP1O14519 115 aa13.43□□□□□ -0.26
HDDC2-209ENST00000609477 PLIN3O60664 434 aa13.43□□□□□ -0.26
HDDC2-209ENST00000609477 B3GALT4O96024 378 aa13.43□□□□□ -0.26
HDDC2-209ENST00000609477 PROCP04070 461 aa13.43□□□□□ -0.26
HDDC2-209ENST00000609477 PRR35P0CG20 571 aa13.43□□□□□ -0.26
HDDC2-209ENST00000609477 ATP5A1P25705 553 aaKnown RBP13.43□□□□□ -0.26
HDDC2-209ENST00000609477 DEKP35659 375 aaKnown RBP13.43□□□□□ -0.26
HDDC2-209ENST00000609477 RAP1GDS1P52306 607 aa13.43□□□□□ -0.26
HDDC2-209ENST00000609477 EFNA3P52797 238 aa13.43□□□□□ -0.26
HDDC2-209ENST00000609477 LIM2P55344 173 aa13.43□□□□□ -0.26
HDDC2-209ENST00000609477 PKNOX1P55347 436 aa13.43□□□□□ -0.26
HDDC2-209ENST00000609477 OLR1P78380 273 aa13.43□□□□□ -0.26
HDDC2-209ENST00000609477 LCP2Q13094 533 aa13.43□□□□□ -0.26
HDDC2-209ENST00000609477 BIKQ13323 160 aa13.43□□□□□ -0.26
HDDC2-209ENST00000609477 RUNX2Q13950 521 aa13.43□□□□□ -0.26
HDDC2-209ENST00000609477 UNC50Q53HI1 259 aa13.43□□□□□ -0.26
HDDC2-209ENST00000609477 CRB2Q5IJ48 1285 aa13.43□□□□□ -0.26
HDDC2-209ENST00000609477 PLAG1Q6DJT9 500 aa13.43□□□□□ -0.26
HDDC2-209ENST00000609477 TTC19Q6DKK2 380 aaPredicted RBP13.43□□□□□ -0.26
HDDC2-209ENST00000609477 FAAH2Q6GMR7 532 aa13.43□□□□□ -0.26
HDDC2-209ENST00000609477 IGFL2Q6UWQ7 119 aa13.43□□□□□ -0.26
HDDC2-209ENST00000609477 ATG14Q6ZNE5 492 aa13.43□□□□□ -0.26
HDDC2-209ENST00000609477 UBE3DQ7Z6J8 389 aa13.43□□□□□ -0.26
HDDC2-209ENST00000609477 PARP9Q8IXQ6 854 aa13.43□□□□□ -0.26
HDDC2-209ENST00000609477 ZCCHC7Q8N3Z6 543 aaKnown RBP13.43□□□□□ -0.26
HDDC2-209ENST00000609477 ACOT4Q8N9L9 421 aa13.43□□□□□ -0.26
HDDC2-209ENST00000609477 OR4F6Q8NGB9 312 aa13.43□□□□□ -0.26
HDDC2-209ENST00000609477 OR2W6PQ8NHA6 318 aa13.43□□□□□ -0.26
HDDC2-209ENST00000609477 M1APQ8TC57 530 aa13.43□□□□□ -0.26
HDDC2-209ENST00000609477 THOC3Q96J01 351 aaKnown RBP13.43□□□□□ -0.26
HDDC2-209ENST00000609477 PTCHD1Q96NR3 888 aa13.43□□□□□ -0.26
HDDC2-209ENST00000609477 NSUN5Q96P11 429 aaKnown RBP13.43□□□□□ -0.26
HDDC2-209ENST00000609477 TMEM237Q96Q45 408 aa13.43□□□□□ -0.26
HDDC2-209ENST00000609477 LPAR4Q99677 370 aa13.43□□□□□ -0.26
HDDC2-209ENST00000609477 ELOVL6Q9H5J4 265 aa13.43□□□□□ -0.26
HDDC2-209ENST00000609477 AHSPQ9NZD4 102 aa13.43□□□□□ -0.26
HDDC2-209ENST00000609477 EMCNQ9ULC0 261 aa13.43□□□□□ -0.26
HDDC2-209ENST00000609477 PLAAQ9Y263 795 aa13.43□□□□□ -0.26
HDDC2-209ENST00000609477 IGKV3D-11A0A0A0MRZ8 115 aa13.42□□□□□ -0.26
HDDC2-209ENST00000609477 TCRBV16S1A1N1A0A5B0 115 aa13.42□□□□□ -0.26
HDDC2-209ENST00000609477 CYR61O00622 381 aa13.42□□□□□ -0.26
HDDC2-209ENST00000609477 B4GALT2O60909 372 aa13.42□□□□□ -0.26
HDDC2-209ENST00000609477 DNAJB6O75190 326 aa13.42□□□□□ -0.26
HDDC2-209ENST00000609477 ERLIN1O75477 346 aa13.42□□□□□ -0.26
HDDC2-209ENST00000609477 CDC123O75794 336 aaPredicted RBP13.42□□□□□ -0.26
HDDC2-209ENST00000609477 KRT6AP02538 564 aa13.42□□□□□ -0.26
HDDC2-209ENST00000609477 KRT6BP04259 564 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms