RNA–Protein interactions for RNA: ENST00000609232.5

CTCFL-222, Transcript of CCCTC-binding factor like, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTCFL, Length 3,668 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-222ENST00000609232 NRBF2Q96F24 287 aa9.42□□□□□ -0.9
CTCFL-222ENST00000609232 NECTIN4Q96NY8 510 aa9.42□□□□□ -0.9
CTCFL-222ENST00000609232 NUSAP1Q9BXS6 441 aaKnown RBP9.42□□□□□ -0.9
CTCFL-222ENST00000609232 C1orf109Q9NX04 203 aa9.42□□□□□ -0.9
CTCFL-222ENST00000609232 DSPP15924 2871 aaKnown RBP9.42□□□□□ -0.9
CTCFL-222ENST00000609232 BMP10O95393 424 aa9.42□□□□□ -0.9
CTCFL-222ENST00000609232 KRT75O95678 551 aa9.42□□□□□ -0.9
CTCFL-222ENST00000609232 EGFP01133 1207 aa9.42□□□□□ -0.9
CTCFL-222ENST00000609232 FMO3P31513 532 aa9.42□□□□□ -0.9
CTCFL-222ENST00000609232 LTBRP36941 435 aa9.42□□□□□ -0.9
CTCFL-222ENST00000609232 MAPK11Q15759 364 aa9.42□□□□□ -0.9
CTCFL-222ENST00000609232 TJAP1Q5JTD0 557 aa9.42□□□□□ -0.9
CTCFL-222ENST00000609232 ZNF852Q6ZMS4 543 aa9.42□□□□□ -0.9
CTCFL-222ENST00000609232 SLC15A4Q8N697 577 aa9.42□□□□□ -0.9
CTCFL-222ENST00000609232 TMEM102Q8N9M5 508 aaPredicted RBP9.42□□□□□ -0.9
CTCFL-222ENST00000609232 OR8K5Q8NH50 307 aa9.42□□□□□ -0.9
CTCFL-222ENST00000609232 BIRC7Q96CA5 298 aa9.42□□□□□ -0.9
CTCFL-222ENST00000609232 GAS2L1Q99501 681 aaPredicted RBP9.42□□□□□ -0.9
CTCFL-222ENST00000609232 SACM1LQ9NTJ5 587 aa9.42□□□□□ -0.9
CTCFL-222ENST00000609232 LEF1Q9UJU2 399 aaPredicted RBP9.42□□□□□ -0.9
CTCFL-222ENST00000609232 ANAPC2Q9UJX6 822 aa9.42□□□□□ -0.9
CTCFL-222ENST00000609232 PCDHB14Q9Y5E9 798 aa9.42□□□□□ -0.9
CTCFL-222ENST00000609232 H3BMQ9 156 aa9.41□□□□□ -0.9
CTCFL-222ENST00000609232 CH25HO95992 272 aa9.41□□□□□ -0.9
CTCFL-222ENST00000609232 C5AR1P21730 350 aa9.41□□□□□ -0.9
CTCFL-222ENST00000609232 BUD31P41223 144 aaPredicted RBP9.41□□□□□ -0.9
CTCFL-222ENST00000609232 DAB2P98082 770 aa9.41□□□□□ -0.9
CTCFL-222ENST00000609232 DHRS4L2Q6PKH6 230 aa9.41□□□□□ -0.9
CTCFL-222ENST00000609232 CHSY3Q70JA7 882 aa9.41□□□□□ -0.9
CTCFL-222ENST00000609232 Q8N9G6 341 aaPredicted RBP9.41□□□□□ -0.9
CTCFL-222ENST00000609232 OR5D16Q8NGK9 328 aa9.41□□□□□ -0.9
CTCFL-222ENST00000609232 CXorf40BQ96DE9 158 aa9.41□□□□□ -0.9
CTCFL-222ENST00000609232 ITPKCQ96DU7 683 aa9.41□□□□□ -0.9
CTCFL-222ENST00000609232 COG8Q96MW5 612 aa9.41□□□□□ -0.9
CTCFL-222ENST00000609232 CGREF1Q99674 301 aa9.41□□□□□ -0.9
CTCFL-222ENST00000609232 NAA50Q9GZZ1 169 aaKnown RBP9.41□□□□□ -0.9
CTCFL-222ENST00000609232 FSCN3Q9NQT6 498 aa9.41□□□□□ -0.9
CTCFL-222ENST00000609232 HCN2Q9UL51 889 aa9.41□□□□□ -0.9
CTCFL-222ENST00000609232 SNX6Q9UNH7 406 aa9.41□□□□□ -0.9
CTCFL-222ENST00000609232 MTCH2Q9Y6C9 303 aa9.41□□□□□ -0.9
CTCFL-222ENST00000609232 ATRXP46100 2492 aa9.41□□□□□ -0.9
CTCFL-222ENST00000609232 A0A1W2PS29 197 aa9.41□□□□□ -0.9
CTCFL-222ENST00000609232 TCRBV21S2A2A0A5A6 115 aa9.41□□□□□ -0.9
CTCFL-222ENST00000609232 NDUFS4O43181 175 aa9.41□□□□□ -0.9
CTCFL-222ENST00000609232 SPINT1O43278 529 aa9.41□□□□□ -0.9
CTCFL-222ENST00000609232 ERI3O43414 337 aaKnown RBP9.41□□□□□ -0.9
CTCFL-222ENST00000609232 ADH1BP00325 375 aa9.41□□□□□ -0.9
CTCFL-222ENST00000609232 MPC1LP0DKB6 136 aa9.41□□□□□ -0.9
CTCFL-222ENST00000609232 IL1RNP18510 177 aa9.41□□□□□ -0.9
CTCFL-222ENST00000609232 TTKP33981 857 aa9.41□□□□□ -0.9
CTCFL-222ENST00000609232 PRLHRP49683 370 aa9.41□□□□□ -0.9
CTCFL-222ENST00000609232 ERVK-8P63133 956 aa9.41□□□□□ -0.9
CTCFL-222ENST00000609232 MOGQ16653 247 aa9.41□□□□□ -0.9
CTCFL-222ENST00000609232 HIST2H2ACQ16777 129 aaPredicted RBP9.41□□□□□ -0.9
CTCFL-222ENST00000609232 DEFB134Q4QY38 66 aa9.41□□□□□ -0.9
CTCFL-222ENST00000609232 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.41□□□□□ -0.9
CTCFL-222ENST00000609232 PIP5KL1Q5T9C9 394 aa9.41□□□□□ -0.9
CTCFL-222ENST00000609232 CPTPQ5TA50 214 aa9.41□□□□□ -0.9
CTCFL-222ENST00000609232 HIST2H2AA3Q6FI13 130 aa9.41□□□□□ -0.9
CTCFL-222ENST00000609232 CARM1Q86X55 608 aa9.41□□□□□ -0.9
CTCFL-222ENST00000609232 TBC1D15Q8TC07 691 aa9.41□□□□□ -0.9
CTCFL-222ENST00000609232 THAP3Q8WTV1 239 aaPredicted RBP9.41□□□□□ -0.9
CTCFL-222ENST00000609232 ZNF480Q8WV37 535 aa9.41□□□□□ -0.9
CTCFL-222ENST00000609232 PMEPA1Q969W9 287 aa9.41□□□□□ -0.9
CTCFL-222ENST00000609232 REXO5Q96IC2 774 aaKnown RBP9.41□□□□□ -0.9
CTCFL-222ENST00000609232 ZNF597Q96LX8 424 aa9.41□□□□□ -0.9
CTCFL-222ENST00000609232 BBS4Q96RK4 519 aa9.41□□□□□ -0.9
CTCFL-222ENST00000609232 ZNF229Q9UJW7 825 aa9.41□□□□□ -0.9
CTCFL-222ENST00000609232 NCKAP1Q9Y2A7 1128 aa9.41□□□□□ -0.9
CTCFL-222ENST00000609232 SGTAO43765 313 aa9.41□□□□□ -0.9
CTCFL-222ENST00000609232 PCDH7O60245 1069 aa9.41□□□□□ -0.9
CTCFL-222ENST00000609232 CD247P20963 164 aa9.41□□□□□ -0.9
CTCFL-222ENST00000609232 GPX3P22352 226 aa9.41□□□□□ -0.9
CTCFL-222ENST00000609232 DRD3P35462 400 aa9.41□□□□□ -0.9
CTCFL-222ENST00000609232 CCR4P51679 360 aa9.41□□□□□ -0.9
CTCFL-222ENST00000609232 AP1S2P56377 157 aa9.41□□□□□ -0.9
CTCFL-222ENST00000609232 TRAF3Q13114 568 aa9.41□□□□□ -0.9
CTCFL-222ENST00000609232 SLC14A1Q13336 389 aa9.41□□□□□ -0.9
CTCFL-222ENST00000609232 PMS2P3Q13401 168 aa9.41□□□□□ -0.9
CTCFL-222ENST00000609232 HTR4Q13639 388 aa9.41□□□□□ -0.9
CTCFL-222ENST00000609232 WSCD2Q2TBF2 565 aa9.41□□□□□ -0.9
CTCFL-222ENST00000609232 TMEM196Q5HYL7 178 aa9.41□□□□□ -0.9
CTCFL-222ENST00000609232 KCTD8Q6ZWB6 473 aa9.41□□□□□ -0.9
CTCFL-222ENST00000609232 VASH1Q7L8A9 365 aaPredicted RBP9.41□□□□□ -0.9
CTCFL-222ENST00000609232 TCAIMQ8N3R3 496 aa9.41□□□□□ -0.9
CTCFL-222ENST00000609232 OR2T3Q8NH03 318 aa9.41□□□□□ -0.9
CTCFL-222ENST00000609232 NETO1Q8TDF5 533 aa9.41□□□□□ -0.9
CTCFL-222ENST00000609232 LCN9Q8WX39 176 aa9.41□□□□□ -0.9
CTCFL-222ENST00000609232 VPS35Q96QK1 796 aa9.41□□□□□ -0.9
CTCFL-222ENST00000609232 IL4I1Q96RQ9 567 aa9.41□□□□□ -0.9
CTCFL-222ENST00000609232 COQ7Q99807 217 aa9.41□□□□□ -0.9
CTCFL-222ENST00000609232 IER2Q9BTL4 223 aa9.41□□□□□ -0.9
CTCFL-222ENST00000609232 HDAC8Q9BY41 377 aa9.41□□□□□ -0.9
CTCFL-222ENST00000609232 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.41□□□□□ -0.9
CTCFL-222ENST00000609232 TMEM168Q9H0V1 697 aa9.41□□□□□ -0.9
CTCFL-222ENST00000609232 VPS29Q9UBQ0 182 aa9.41□□□□□ -0.9
CTCFL-222ENST00000609232 SAMHD1Q9Y3Z3 626 aaKnown RBP9.41□□□□□ -0.9
CTCFL-222ENST00000609232 SPG11Q96JI7 2443 aa9.41□□□□□ -0.9
CTCFL-222ENST00000609232 LOC100506127A0A0U1RQW1 187 aa9.4□□□□□ -0.9
CTCFL-222ENST00000609232 K7EQS6 105 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms