RNA–Protein interactions for RNA: ENST00000608461.1

HDDC2-206, Transcript of HD domain containing 2, humanhuman

TSL 2

Gene HDDC2, Length 587 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-206ENST00000608461 F2RL3Q96RI0 385 aa13.45□□□□□ -0.26
HDDC2-206ENST00000608461 NUDT9Q9BW91 350 aa13.45□□□□□ -0.26
HDDC2-206ENST00000608461 ZNF552Q9H707 407 aaPredicted RBP13.45□□□□□ -0.26
HDDC2-206ENST00000608461 SEMA4BQ9NPR2 832 aaPredicted RBP13.45□□□□□ -0.26
HDDC2-206ENST00000608461 DMRT3Q9NQL9 472 aa13.45□□□□□ -0.26
HDDC2-206ENST00000608461 PRDM9Q9NQV7 894 aa13.45□□□□□ -0.26
HDDC2-206ENST00000608461 ZNF71Q9NQZ8 489 aaPredicted RBP13.45□□□□□ -0.26
HDDC2-206ENST00000608461 MS4A12Q9NXJ0 267 aa13.45□□□□□ -0.26
HDDC2-206ENST00000608461 SENP1Q9P0U3 644 aa13.45□□□□□ -0.26
HDDC2-206ENST00000608461 DAPP1Q9UN19 280 aa13.45□□□□□ -0.26
HDDC2-206ENST00000608461 RNF11Q9Y3C5 154 aa13.45□□□□□ -0.26
HDDC2-206ENST00000608461 SPACA6W5XKT8 324 aa13.45□□□□□ -0.26
HDDC2-206ENST00000608461 A6NL46 340 aa13.44□□□□□ -0.26
HDDC2-206ENST00000608461 SMIM23A6NLE4 172 aa13.44□□□□□ -0.26
HDDC2-206ENST00000608461 C4orf51C9J302 202 aa13.44□□□□□ -0.26
HDDC2-206ENST00000608461 SUV39H1O43463 412 aa13.44□□□□□ -0.26
HDDC2-206ENST00000608461 SUPT7LO94864 414 aa13.44□□□□□ -0.26
HDDC2-206ENST00000608461 SEMA3DO95025 777 aa13.44□□□□□ -0.26
HDDC2-206ENST00000608461 TGFB1P01137 390 aa13.44□□□□□ -0.26
HDDC2-206ENST00000608461 SERPINA7P05543 415 aa13.44□□□□□ -0.26
HDDC2-206ENST00000608461 MYL2P10916 166 aa13.44□□□□□ -0.26
HDDC2-206ENST00000608461 HIST1H1TP22492 207 aaPredicted RBP13.44□□□□□ -0.26
HDDC2-206ENST00000608461 ARL1P40616 181 aaPredicted RBP13.44□□□□□ -0.26
HDDC2-206ENST00000608461 DNAJB13P59910 316 aa13.44□□□□□ -0.26
HDDC2-206ENST00000608461 IFT88Q13099 833 aa13.44□□□□□ -0.26
HDDC2-206ENST00000608461 ABRAXAS2Q15018 415 aa13.44□□□□□ -0.26
HDDC2-206ENST00000608461 PCOLCEQ15113 449 aa13.44□□□□□ -0.26
HDDC2-206ENST00000608461 ZRSR2Q15696 482 aaKnown RBP13.44□□□□□ -0.26
HDDC2-206ENST00000608461 EXT1Q16394 746 aa13.44□□□□□ -0.26
HDDC2-206ENST00000608461 FRG2Q64ET8 278 aa13.44□□□□□ -0.26
HDDC2-206ENST00000608461 OR4C11Q6IEV9 310 aa13.44□□□□□ -0.26
HDDC2-206ENST00000608461 ADNP2Q6IQ32 1131 aa13.44□□□□□ -0.26
HDDC2-206ENST00000608461 ZYG11AQ6WRX3 759 aa13.44□□□□□ -0.26
HDDC2-206ENST00000608461 ANKRD37Q7Z713 158 aa13.44□□□□□ -0.26
HDDC2-206ENST00000608461 ZNF605Q86T29 641 aa13.44□□□□□ -0.26
HDDC2-206ENST00000608461 TRABD2AQ86V40 505 aa13.44□□□□□ -0.26
HDDC2-206ENST00000608461 TEX19Q8NA77 164 aa13.44□□□□□ -0.26
HDDC2-206ENST00000608461 C8orf44Q96CB5 159 aa13.44□□□□□ -0.26
HDDC2-206ENST00000608461 IMMP1LQ96LU5 166 aa13.44□□□□□ -0.26
HDDC2-206ENST00000608461 FRG2BQ96QU4 278 aa13.44□□□□□ -0.26
HDDC2-206ENST00000608461 LMF1Q96S06 567 aa13.44□□□□□ -0.26
HDDC2-206ENST00000608461 ZNF382Q96SR6 550 aa13.44□□□□□ -0.26
HDDC2-206ENST00000608461 MTERF1Q99551 399 aaKnown RBP13.44□□□□□ -0.26
HDDC2-206ENST00000608461 SERPINI1Q99574 410 aa13.44□□□□□ -0.26
HDDC2-206ENST00000608461 IQCGQ9H095 443 aaKnown RBP13.44□□□□□ -0.26
HDDC2-206ENST00000608461 BRF2Q9HAW0 419 aa13.44□□□□□ -0.26
HDDC2-206ENST00000608461 ZNF160Q9HCG1 818 aa13.44□□□□□ -0.26
HDDC2-206ENST00000608461 PRM3Q9NNZ6 103 aa13.44□□□□□ -0.26
HDDC2-206ENST00000608461 NMRK1Q9NWW6 199 aa13.44□□□□□ -0.26
HDDC2-206ENST00000608461 TRPS1Q9UHF7 1281 aa13.44□□□□□ -0.26
HDDC2-206ENST00000608461 SNX6Q9UNH7 406 aa13.44□□□□□ -0.26
HDDC2-206ENST00000608461 CCDC151A5D8V7 595 aa13.43□□□□□ -0.26
HDDC2-206ENST00000608461 G3V2L1 256 aa13.43□□□□□ -0.26
HDDC2-206ENST00000608461 CDK2AP1O14519 115 aa13.43□□□□□ -0.26
HDDC2-206ENST00000608461 PLIN3O60664 434 aa13.43□□□□□ -0.26
HDDC2-206ENST00000608461 B3GALT4O96024 378 aa13.43□□□□□ -0.26
HDDC2-206ENST00000608461 PROCP04070 461 aa13.43□□□□□ -0.26
HDDC2-206ENST00000608461 PRR35P0CG20 571 aa13.43□□□□□ -0.26
HDDC2-206ENST00000608461 ATP5A1P25705 553 aaKnown RBP13.43□□□□□ -0.26
HDDC2-206ENST00000608461 DEKP35659 375 aaKnown RBP13.43□□□□□ -0.26
HDDC2-206ENST00000608461 RAP1GDS1P52306 607 aa13.43□□□□□ -0.26
HDDC2-206ENST00000608461 EFNA3P52797 238 aa13.43□□□□□ -0.26
HDDC2-206ENST00000608461 LIM2P55344 173 aa13.43□□□□□ -0.26
HDDC2-206ENST00000608461 PKNOX1P55347 436 aa13.43□□□□□ -0.26
HDDC2-206ENST00000608461 OLR1P78380 273 aa13.43□□□□□ -0.26
HDDC2-206ENST00000608461 LCP2Q13094 533 aa13.43□□□□□ -0.26
HDDC2-206ENST00000608461 BIKQ13323 160 aa13.43□□□□□ -0.26
HDDC2-206ENST00000608461 RUNX2Q13950 521 aa13.43□□□□□ -0.26
HDDC2-206ENST00000608461 UNC50Q53HI1 259 aa13.43□□□□□ -0.26
HDDC2-206ENST00000608461 CRB2Q5IJ48 1285 aa13.43□□□□□ -0.26
HDDC2-206ENST00000608461 PLAG1Q6DJT9 500 aa13.43□□□□□ -0.26
HDDC2-206ENST00000608461 TTC19Q6DKK2 380 aaPredicted RBP13.43□□□□□ -0.26
HDDC2-206ENST00000608461 FAAH2Q6GMR7 532 aa13.43□□□□□ -0.26
HDDC2-206ENST00000608461 IGFL2Q6UWQ7 119 aa13.43□□□□□ -0.26
HDDC2-206ENST00000608461 ATG14Q6ZNE5 492 aa13.43□□□□□ -0.26
HDDC2-206ENST00000608461 UBE3DQ7Z6J8 389 aa13.43□□□□□ -0.26
HDDC2-206ENST00000608461 PARP9Q8IXQ6 854 aa13.43□□□□□ -0.26
HDDC2-206ENST00000608461 ZCCHC7Q8N3Z6 543 aaKnown RBP13.43□□□□□ -0.26
HDDC2-206ENST00000608461 ACOT4Q8N9L9 421 aa13.43□□□□□ -0.26
HDDC2-206ENST00000608461 OR4F6Q8NGB9 312 aa13.43□□□□□ -0.26
HDDC2-206ENST00000608461 OR2W6PQ8NHA6 318 aa13.43□□□□□ -0.26
HDDC2-206ENST00000608461 M1APQ8TC57 530 aa13.43□□□□□ -0.26
HDDC2-206ENST00000608461 THOC3Q96J01 351 aaKnown RBP13.43□□□□□ -0.26
HDDC2-206ENST00000608461 PTCHD1Q96NR3 888 aa13.43□□□□□ -0.26
HDDC2-206ENST00000608461 NSUN5Q96P11 429 aaKnown RBP13.43□□□□□ -0.26
HDDC2-206ENST00000608461 TMEM237Q96Q45 408 aa13.43□□□□□ -0.26
HDDC2-206ENST00000608461 LPAR4Q99677 370 aa13.43□□□□□ -0.26
HDDC2-206ENST00000608461 ELOVL6Q9H5J4 265 aa13.43□□□□□ -0.26
HDDC2-206ENST00000608461 AHSPQ9NZD4 102 aa13.43□□□□□ -0.26
HDDC2-206ENST00000608461 EMCNQ9ULC0 261 aa13.43□□□□□ -0.26
HDDC2-206ENST00000608461 PLAAQ9Y263 795 aa13.43□□□□□ -0.26
HDDC2-206ENST00000608461 IGKV3D-11A0A0A0MRZ8 115 aa13.42□□□□□ -0.26
HDDC2-206ENST00000608461 TCRBV16S1A1N1A0A5B0 115 aa13.42□□□□□ -0.26
HDDC2-206ENST00000608461 CYR61O00622 381 aa13.42□□□□□ -0.26
HDDC2-206ENST00000608461 B4GALT2O60909 372 aa13.42□□□□□ -0.26
HDDC2-206ENST00000608461 DNAJB6O75190 326 aa13.42□□□□□ -0.26
HDDC2-206ENST00000608461 ERLIN1O75477 346 aa13.42□□□□□ -0.26
HDDC2-206ENST00000608461 CDC123O75794 336 aaPredicted RBP13.42□□□□□ -0.26
HDDC2-206ENST00000608461 KRT6AP02538 564 aa13.42□□□□□ -0.26
HDDC2-206ENST00000608461 KRT6BP04259 564 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms