RNA–Protein interactions for RNA: ENST00000608295.5

HDDC2-204, Transcript of HD domain containing 2, humanhuman

TSL 5 BASIC

Gene HDDC2, Length 879 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-204ENST00000608295 IPPKQ9H8X2 491 aa13.6□□□□□ -0.23
HDDC2-204ENST00000608295 SEMA4BQ9NPR2 832 aaPredicted RBP13.6□□□□□ -0.23
HDDC2-204ENST00000608295 PNO1Q9NRX1 252 aaKnown RBP13.6□□□□□ -0.23
HDDC2-204ENST00000608295 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.6□□□□□ -0.23
HDDC2-204ENST00000608295 ZNF180Q9UJW8 692 aa13.6□□□□□ -0.23
HDDC2-204ENST00000608295 FBXW2Q9UKT8 454 aa13.6□□□□□ -0.23
HDDC2-204ENST00000608295 RNF11Q9Y3C5 154 aa13.6□□□□□ -0.23
HDDC2-204ENST00000608295 PCDHGA10Q9Y5H3 936 aa13.6□□□□□ -0.23
HDDC2-204ENST00000608295 V9GYY5 206 aaPredicted RBP13.6□□□□□ -0.23
HDDC2-204ENST00000608295 A0A088AWK7 358 aa13.59□□□□□ -0.23
HDDC2-204ENST00000608295 A0A1W2PQ72 361 aa13.59□□□□□ -0.23
HDDC2-204ENST00000608295 ARHGAP10A1A4S6 786 aa13.59□□□□□ -0.23
HDDC2-204ENST00000608295 E2F3O00716 465 aa13.59□□□□□ -0.23
HDDC2-204ENST00000608295 SMIM24O75264 130 aa13.59□□□□□ -0.23
HDDC2-204ENST00000608295 PRKRAO75569 313 aaKnown RBP13.59□□□□□ -0.23
HDDC2-204ENST00000608295 WDPCPO95876 746 aa13.59□□□□□ -0.23
HDDC2-204ENST00000608295 ZNF10P21506 573 aaPredicted RBP13.59□□□□□ -0.23
HDDC2-204ENST00000608295 CNTFP26441 200 aa13.59□□□□□ -0.23
HDDC2-204ENST00000608295 NEK2P51955 445 aa13.59□□□□□ -0.23
HDDC2-204ENST00000608295 MTTPP55157 894 aa13.59□□□□□ -0.23
HDDC2-204ENST00000608295 RAB38P57729 211 aa13.59□□□□□ -0.23
HDDC2-204ENST00000608295 SLC26A5P58743 744 aa13.59□□□□□ -0.23
HDDC2-204ENST00000608295 RPS13P62277 151 aaKnown RBP13.59□□□□□ -0.23
HDDC2-204ENST00000608295 ZNF169Q14929 603 aaPredicted RBP13.59□□□□□ -0.23
HDDC2-204ENST00000608295 NR6A1Q15406 480 aa13.59□□□□□ -0.23
HDDC2-204ENST00000608295 TBCCQ15814 346 aa13.59□□□□□ -0.23
HDDC2-204ENST00000608295 TSNAXIP1Q2TAA8 658 aa13.59□□□□□ -0.23
HDDC2-204ENST00000608295 SGO1Q5FBB7 561 aa13.59□□□□□ -0.23
HDDC2-204ENST00000608295 ABHD17BQ5VST6 288 aa13.59□□□□□ -0.23
HDDC2-204ENST00000608295 NIPAL1Q6NVV3 410 aa13.59□□□□□ -0.23
HDDC2-204ENST00000608295 ABHD17CQ6PCB6 329 aa13.59□□□□□ -0.23
HDDC2-204ENST00000608295 IGFL3Q6UXB1 125 aa13.59□□□□□ -0.23
HDDC2-204ENST00000608295 UBE3DQ7Z6J8 389 aa13.59□□□□□ -0.23
HDDC2-204ENST00000608295 CRLF3Q8IUI8 442 aa13.59□□□□□ -0.23
HDDC2-204ENST00000608295 BEST3Q8N1M1 668 aa13.59□□□□□ -0.23
HDDC2-204ENST00000608295 THAP3Q8WTV1 239 aaPredicted RBP13.59□□□□□ -0.23
HDDC2-204ENST00000608295 TXLNGYQ9BZA5 131 aa13.59□□□□□ -0.23
HDDC2-204ENST00000608295 MRPL46Q9H2W6 279 aaKnown RBP13.59□□□□□ -0.23
HDDC2-204ENST00000608295 L2HGDHQ9H9P8 463 aa13.59□□□□□ -0.23
HDDC2-204ENST00000608295 DMRT3Q9NQL9 472 aa13.59□□□□□ -0.23
HDDC2-204ENST00000608295 PRDM9Q9NQV7 894 aa13.59□□□□□ -0.23
HDDC2-204ENST00000608295 PRTFDC1Q9NRG1 225 aa13.59□□□□□ -0.23
HDDC2-204ENST00000608295 COPG2Q9UBF2 871 aa13.59□□□□□ -0.23
HDDC2-204ENST00000608295 PCTPQ9UKL6 214 aa13.59□□□□□ -0.23
HDDC2-204ENST00000608295 SVILO95425 2214 aa13.58□□□□□ -0.24
HDDC2-204ENST00000608295 A8MT66 165 aa13.58□□□□□ -0.24
HDDC2-204ENST00000608295 TCP11X1B4DZS4 312 aa13.58□□□□□ -0.24
HDDC2-204ENST00000608295 OR7A17O14581 309 aa13.58□□□□□ -0.24
HDDC2-204ENST00000608295 KLK8O60259 260 aa13.58□□□□□ -0.24
HDDC2-204ENST00000608295 MYO1DO94832 1006 aa13.58□□□□□ -0.24
HDDC2-204ENST00000608295 RBP1P09455 135 aa13.58□□□□□ -0.24
HDDC2-204ENST00000608295 IL10P22301 178 aa13.58□□□□□ -0.24
HDDC2-204ENST00000608295 GSTM2P28161 218 aa13.58□□□□□ -0.24
HDDC2-204ENST00000608295 CCNG1P51959 295 aa13.58□□□□□ -0.24
HDDC2-204ENST00000608295 CDH13P55290 713 aa13.58□□□□□ -0.24
HDDC2-204ENST00000608295 LIM2P55344 173 aa13.58□□□□□ -0.24
HDDC2-204ENST00000608295 PMP22Q01453 160 aa13.58□□□□□ -0.24
HDDC2-204ENST00000608295 TGM3Q08188 693 aa13.58□□□□□ -0.24
HDDC2-204ENST00000608295 PCBP2Q15366 365 aaKnown RBP eCLIP13.58□□□□□ -0.24
HDDC2-204ENST00000608295 ADPRMQ3LIE5 342 aa13.58□□□□□ -0.24
HDDC2-204ENST00000608295 PLAG1Q6DJT9 500 aa13.58□□□□□ -0.24
HDDC2-204ENST00000608295 QSOX2Q6ZRP7 698 aa13.58□□□□□ -0.24
HDDC2-204ENST00000608295 RIPOR1Q6ZS17 1223 aa13.58□□□□□ -0.24
HDDC2-204ENST00000608295 LAS2Q8IYD9 372 aa13.58□□□□□ -0.24
HDDC2-204ENST00000608295 PLPP5Q8NEB5 264 aa13.58□□□□□ -0.24
HDDC2-204ENST00000608295 EPS8L3Q8TE67 593 aaKnown RBP13.58□□□□□ -0.24
HDDC2-204ENST00000608295 DOK4Q8TEW6 326 aa13.58□□□□□ -0.24
HDDC2-204ENST00000608295 UBE2E3Q969T4 207 aa13.58□□□□□ -0.24
HDDC2-204ENST00000608295 KCNC2Q96PR1 638 aa13.58□□□□□ -0.24
HDDC2-204ENST00000608295 SERINC2Q96SA4 455 aa13.58□□□□□ -0.24
HDDC2-204ENST00000608295 MAPKAP1Q9BPZ7 522 aa13.58□□□□□ -0.24
HDDC2-204ENST00000608295 PITHD1Q9GZP4 211 aaPredicted RBP13.58□□□□□ -0.24
HDDC2-204ENST00000608295 TMEM216Q9P0N5 145 aa13.58□□□□□ -0.24
HDDC2-204ENST00000608295 PSMC3IPQ9P2W1 217 aaPredicted RBP13.58□□□□□ -0.24
HDDC2-204ENST00000608295 COPG1Q9Y678 874 aaKnown RBP13.58□□□□□ -0.24
HDDC2-204ENST00000608295 DOPEY2Q9Y3R5 2298 aa13.57□□□□□ -0.24
HDDC2-204ENST00000608295 UBR5O95071 2799 aaPredicted RBP13.57□□□□□ -0.24
HDDC2-204ENST00000608295 IGKV3D-11A0A0A0MRZ8 115 aa13.57□□□□□ -0.24
HDDC2-204ENST00000608295 TRBV11-1A0A0K0K1C0 115 aa13.57□□□□□ -0.24
HDDC2-204ENST00000608295 A0A1B0GTL3 188 aa13.57□□□□□ -0.24
HDDC2-204ENST00000608295 TCRBV16S1A1N1A0A5B0 115 aa13.57□□□□□ -0.24
HDDC2-204ENST00000608295 SAGE2PA6NJ88 616 aa13.57□□□□□ -0.24
HDDC2-204ENST00000608295 PCDH17O14917 1159 aa13.57□□□□□ -0.24
HDDC2-204ENST00000608295 LDB3O75112 727 aa13.57□□□□□ -0.24
HDDC2-204ENST00000608295 ETHE1O95571 254 aa13.57□□□□□ -0.24
HDDC2-204ENST00000608295 GBAP04062 536 aa13.57□□□□□ -0.24
HDDC2-204ENST00000608295 IFNA16P05015 189 aa13.57□□□□□ -0.24
HDDC2-204ENST00000608295 SBK3P0C264 359 aa13.57□□□□□ -0.24
HDDC2-204ENST00000608295 ATP5A1P25705 553 aaKnown RBP13.57□□□□□ -0.24
HDDC2-204ENST00000608295 TLR1Q15399 786 aa13.57□□□□□ -0.24
HDDC2-204ENST00000608295 ZRSR2Q15696 482 aaKnown RBP13.57□□□□□ -0.24
HDDC2-204ENST00000608295 EXT1Q16394 746 aa13.57□□□□□ -0.24
HDDC2-204ENST00000608295 LGSNQ5TDP6 509 aa13.57□□□□□ -0.24
HDDC2-204ENST00000608295 KHDRBS2Q5VWX1 349 aaKnown RBP13.57□□□□□ -0.24
HDDC2-204ENST00000608295 TTC19Q6DKK2 380 aaPredicted RBP13.57□□□□□ -0.24
HDDC2-204ENST00000608295 ADGRD1Q6QNK2 874 aa13.57□□□□□ -0.24
HDDC2-204ENST00000608295 IGFL2Q6UWQ7 119 aa13.57□□□□□ -0.24
HDDC2-204ENST00000608295 ACOT4Q8N9L9 421 aa13.57□□□□□ -0.24
HDDC2-204ENST00000608295 ARMC2Q8NEN0 867 aa13.57□□□□□ -0.24
HDDC2-204ENST00000608295 GRHL3Q8TE85 626 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms