RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 CIDECQ96AQ7 238 aaPredicted RBP20.52■□□□□ 0.88
USP6NL-204ENST00000606752 DUS3LQ96G46 650 aaKnown RBP20.52■□□□□ 0.88
USP6NL-204ENST00000606752 ZNF764Q96H86 408 aaPredicted RBP20.52■□□□□ 0.88
USP6NL-204ENST00000606752 MDC1Q14676 2089 aaKnown RBP20.52■□□□□ 0.87
USP6NL-204ENST00000606752 URADA6NGE7 173 aa20.51■□□□□ 0.87
USP6NL-204ENST00000606752 DRD2P14416 443 aa20.51■□□□□ 0.87
USP6NL-204ENST00000606752 ENGP17813 658 aa20.51■□□□□ 0.87
USP6NL-204ENST00000606752 CAPZBP47756 277 aa20.51■□□□□ 0.87
USP6NL-204ENST00000606752 RAB8AP61006 207 aa20.51■□□□□ 0.87
USP6NL-204ENST00000606752 PRSS53Q2L4Q9 553 aa20.51■□□□□ 0.87
USP6NL-204ENST00000606752 C6orf132Q5T0Z8 1188 aa20.51■□□□□ 0.87
USP6NL-204ENST00000606752 MRM1Q6IN84 353 aaKnown RBP20.51■□□□□ 0.87
USP6NL-204ENST00000606752 RNF111Q6ZNA4 994 aa20.51■□□□□ 0.87
USP6NL-204ENST00000606752 RNF44Q7L0R7 432 aa20.51■□□□□ 0.87
USP6NL-204ENST00000606752 TMEM105Q8N8V8 129 aa20.51■□□□□ 0.87
USP6NL-204ENST00000606752 GOLM1Q8NBJ4 401 aa20.51■□□□□ 0.87
USP6NL-204ENST00000606752 OR4A15Q8NGL6 344 aa20.51■□□□□ 0.87
USP6NL-204ENST00000606752 RERGQ96A58 199 aaPredicted RBP20.51■□□□□ 0.87
USP6NL-204ENST00000606752 TEX10Q9NXF1 929 aaPredicted RBP20.51■□□□□ 0.87
USP6NL-204ENST00000606752 MAGEL2Q9UJ55 1249 aa20.51■□□□□ 0.87
USP6NL-204ENST00000606752 VPS4AQ9UN37 437 aa20.51■□□□□ 0.87
USP6NL-204ENST00000606752 LOC105369274A0A096LPK9 316 aa20.5■□□□□ 0.87
USP6NL-204ENST00000606752 LOC102723532A0A0G2JNH3 316 aa20.5■□□□□ 0.87
USP6NL-204ENST00000606752 GUCY1B2O75343 617 aa20.5■□□□□ 0.87
USP6NL-204ENST00000606752 CDH3P22223 829 aa20.5■□□□□ 0.87
USP6NL-204ENST00000606752 ALDH9A1P49189 494 aa20.5■□□□□ 0.87
USP6NL-204ENST00000606752 FRMPD2BQ6IN97 320 aa20.5■□□□□ 0.87
USP6NL-204ENST00000606752 CALHM3Q86XJ0 350 aa20.5■□□□□ 0.87
USP6NL-204ENST00000606752 OR4N4Q8N0Y3 316 aa20.5■□□□□ 0.87
USP6NL-204ENST00000606752 FAM120BQ96EK7 910 aaKnown RBP20.5■□□□□ 0.87
USP6NL-204ENST00000606752 FAIM2Q9BWQ8 316 aa20.5■□□□□ 0.87
USP6NL-204ENST00000606752 ZNF282Q9UDV7 671 aaPredicted RBP20.5■□□□□ 0.87
USP6NL-204ENST00000606752 FBXO4Q9UKT5 387 aa20.5■□□□□ 0.87
USP6NL-204ENST00000606752 ASB4Q9Y574 426 aa20.5■□□□□ 0.87
USP6NL-204ENST00000606752 GMEB1Q9Y692 573 aa20.5■□□□□ 0.87
USP6NL-204ENST00000606752 A0A1W2PRB8 838 aa20.5■□□□□ 0.87
USP6NL-204ENST00000606752 C1orf226A1L170 272 aa20.5■□□□□ 0.87
USP6NL-204ENST00000606752 RHPN2P1A8MT19 583 aa20.5■□□□□ 0.87
USP6NL-204ENST00000606752 H0YGG7 62 aa20.5■□□□□ 0.87
USP6NL-204ENST00000606752 SCELO95171 688 aa20.5■□□□□ 0.87
USP6NL-204ENST00000606752 C6orf47O95873 294 aa20.5■□□□□ 0.87
USP6NL-204ENST00000606752 NCK1P16333 377 aa20.5■□□□□ 0.87
USP6NL-204ENST00000606752 SOX11P35716 441 aa20.5■□□□□ 0.87
USP6NL-204ENST00000606752 GZMMP51124 257 aa20.5■□□□□ 0.87
USP6NL-204ENST00000606752 ARF3P61204 181 aaPredicted RBP20.5■□□□□ 0.87
USP6NL-204ENST00000606752 HBA1P69905 142 aa20.5■□□□□ 0.87
USP6NL-204ENST00000606752 BTN3A2P78410 334 aa20.5■□□□□ 0.87
USP6NL-204ENST00000606752 ABHD18Q0P651 414 aa20.5■□□□□ 0.87
USP6NL-204ENST00000606752 MANEAQ5SRI9 462 aa20.5■□□□□ 0.87
USP6NL-204ENST00000606752 NDUFAF5Q5TEU4 345 aa20.5■□□□□ 0.87
USP6NL-204ENST00000606752 GLYATQ6IB77 296 aa20.5■□□□□ 0.87
USP6NL-204ENST00000606752 LRRC74BQ6ZQY2 392 aa20.5■□□□□ 0.87
USP6NL-204ENST00000606752 DTWD2Q8NBA8 298 aa20.5■□□□□ 0.87
USP6NL-204ENST00000606752 UTP15Q8TED0 518 aaKnown RBP20.5■□□□□ 0.87
USP6NL-204ENST00000606752 TRAPPC9Q96Q05 1148 aa20.5■□□□□ 0.87
USP6NL-204ENST00000606752 TAS2R7Q9NYW3 318 aa20.5■□□□□ 0.87
USP6NL-204ENST00000606752 ELOVL7A1L3X0 281 aa20.49■□□□□ 0.87
USP6NL-204ENST00000606752 P2RX6O15547 441 aa20.49■□□□□ 0.87
USP6NL-204ENST00000606752 ZNF888P0CJ79 500 aaPredicted RBP20.49■□□□□ 0.87
USP6NL-204ENST00000606752 SMIM10L1P0DMW3 83 aa20.49■□□□□ 0.87
USP6NL-204ENST00000606752 ST6GAL1P15907 406 aa20.49■□□□□ 0.87
USP6NL-204ENST00000606752 GPX2P18283 190 aa20.49■□□□□ 0.87
USP6NL-204ENST00000606752 SLC7A1P30825 629 aa20.49■□□□□ 0.87
USP6NL-204ENST00000606752 EPHA4P54764 986 aa20.49■□□□□ 0.87
USP6NL-204ENST00000606752 SHBQ15464 509 aa20.49■□□□□ 0.87
USP6NL-204ENST00000606752 IRGCQ6NXR0 463 aa20.49■□□□□ 0.87
USP6NL-204ENST00000606752 DTWD1Q8N5C7 304 aa20.49■□□□□ 0.87
USP6NL-204ENST00000606752 ZNF655Q8N720 491 aaPredicted RBP20.49■□□□□ 0.87
USP6NL-204ENST00000606752 ARL10Q8N8L6 244 aa20.49■□□□□ 0.87
USP6NL-204ENST00000606752 NRG4Q8WWG1 115 aa20.49■□□□□ 0.87
USP6NL-204ENST00000606752 SMIM10Q96HG1 83 aa20.49■□□□□ 0.87
USP6NL-204ENST00000606752 ROGDIQ9GZN7 287 aa20.49■□□□□ 0.87
USP6NL-204ENST00000606752 COPS7BQ9H9Q2 264 aaPredicted RBP20.49■□□□□ 0.87
USP6NL-204ENST00000606752 TPT1P8Q9HAU6 139 aa20.49■□□□□ 0.87
USP6NL-204ENST00000606752 IL21RQ9HBE5 538 aa20.49■□□□□ 0.87
USP6NL-204ENST00000606752 C1GALT1Q9NS00 363 aa20.49■□□□□ 0.87
USP6NL-204ENST00000606752 EHD3Q9NZN3 535 aa20.49■□□□□ 0.87
USP6NL-204ENST00000606752 LRIT1Q9P2V4 623 aa20.49■□□□□ 0.87
USP6NL-204ENST00000606752 AP4S1Q9Y587 144 aa20.49■□□□□ 0.87
USP6NL-204ENST00000606752 ZDBF2Q9HCK1 2354 aa20.49■□□□□ 0.87
USP6NL-204ENST00000606752 FAM220BPB1ANY3 271 aa20.48■□□□□ 0.87
USP6NL-204ENST00000606752 ZSCAN9O15535 394 aaPredicted RBP20.48■□□□□ 0.87
USP6NL-204ENST00000606752 GMNNO75496 209 aa20.48■□□□□ 0.87
USP6NL-204ENST00000606752 GIMD1P0DJR0 217 aa20.48■□□□□ 0.87
USP6NL-204ENST00000606752 GGT1P19440 569 aa20.48■□□□□ 0.87
USP6NL-204ENST00000606752 PPIBP23284 216 aaKnown RBP20.48■□□□□ 0.87
USP6NL-204ENST00000606752 SUZ12Q15022 739 aaKnown RBP20.48■□□□□ 0.87
USP6NL-204ENST00000606752 TRIML2Q8N7C3 387 aa20.48■□□□□ 0.87
USP6NL-204ENST00000606752 C19orf47Q8N9M1 422 aaKnown RBP20.48■□□□□ 0.87
USP6NL-204ENST00000606752 PIGKQ92643 395 aa20.48■□□□□ 0.87
USP6NL-204ENST00000606752 ZC3H10Q96K80 434 aaKnown RBP20.48■□□□□ 0.87
USP6NL-204ENST00000606752 TAS2R9Q9NYW1 312 aa20.48■□□□□ 0.87
USP6NL-204ENST00000606752 C6orf203Q9P0P8 240 aaPredicted RBP20.48■□□□□ 0.87
USP6NL-204ENST00000606752 RNF215Q9Y6U7 377 aa20.48■□□□□ 0.87
USP6NL-204ENST00000606752 NUP214P35658 2090 aaPredicted RBP20.48■□□□□ 0.87
USP6NL-204ENST00000606752 NUDT21O43809 227 aaKnown RBP20.48■□□□□ 0.87
USP6NL-204ENST00000606752 SH3BP5O60239 455 aa20.48■□□□□ 0.87
USP6NL-204ENST00000606752 ABCB1P08183 1280 aaPredicted RBP20.48■□□□□ 0.87
USP6NL-204ENST00000606752 CERS1P27544 350 aa20.48■□□□□ 0.87
USP6NL-204ENST00000606752 SLC14A1Q13336 389 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 130.6 ms