RNA–Protein interactions for RNA: ENST00000604689.1

TUBE1-207, Transcript of tubulin epsilon 1, humanhuman

Gene TUBE1, Length 3,610 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-207ENST00000604689 NANOGP8Q6NSW7 305 aa6.88□□□□□ -1.31
TUBE1-207ENST00000604689 TMEM81Q6P7N7 255 aa6.88□□□□□ -1.31
TUBE1-207ENST00000604689 ZCCHC23Q6ZST2 131 aa6.88□□□□□ -1.31
TUBE1-207ENST00000604689 VTCN1Q7Z7D3 282 aa6.88□□□□□ -1.31
TUBE1-207ENST00000604689 THOC6Q86W42 341 aaKnown RBP6.88□□□□□ -1.31
TUBE1-207ENST00000604689 CXorf67Q86X51 503 aaPredicted RBP6.88□□□□□ -1.31
TUBE1-207ENST00000604689 ZNF687Q8N1G0 1237 aa6.88□□□□□ -1.31
TUBE1-207ENST00000604689 AP3S1Q92572 193 aa6.88□□□□□ -1.31
TUBE1-207ENST00000604689 CD101Q93033 1021 aa6.88□□□□□ -1.31
TUBE1-207ENST00000604689 DUS3LQ96G46 650 aaKnown RBP6.88□□□□□ -1.31
TUBE1-207ENST00000604689 IGSF21Q96ID5 467 aa6.88□□□□□ -1.31
TUBE1-207ENST00000604689 DIRC2Q96SL1 478 aa6.88□□□□□ -1.31
TUBE1-207ENST00000604689 MMP19Q99542 508 aa6.88□□□□□ -1.31
TUBE1-207ENST00000604689 FDXACB1Q9BRP7 624 aaPredicted RBP6.88□□□□□ -1.31
TUBE1-207ENST00000604689 Q9H521 79 aa6.88□□□□□ -1.31
TUBE1-207ENST00000604689 TLE6Q9H808 572 aa6.88□□□□□ -1.31
TUBE1-207ENST00000604689 ZFYVE1Q9HBF4 777 aa6.88□□□□□ -1.31
TUBE1-207ENST00000604689 DUSP22Q9NRW4 184 aa6.88□□□□□ -1.31
TUBE1-207ENST00000604689 PKD2L1Q9P0L9 805 aa6.88□□□□□ -1.31
TUBE1-207ENST00000604689 GNG8Q9UK08 70 aa6.88□□□□□ -1.31
TUBE1-207ENST00000604689 NID2Q14112 1375 aa6.88□□□□□ -1.31
TUBE1-207ENST00000604689 TNRQ92752 1358 aa6.88□□□□□ -1.31
TUBE1-207ENST00000604689 A0A0U1RQV5 110 aa6.88□□□□□ -1.31
TUBE1-207ENST00000604689 CNIH1O95406 144 aa6.88□□□□□ -1.31
TUBE1-207ENST00000604689 PCMT1P22061 227 aa6.88□□□□□ -1.31
TUBE1-207ENST00000604689 EEF1B2P24534 225 aaKnown RBP6.88□□□□□ -1.31
TUBE1-207ENST00000604689 BMPR1AP36894 532 aa6.88□□□□□ -1.31
TUBE1-207ENST00000604689 PTGER3P43115 390 aa6.88□□□□□ -1.31
TUBE1-207ENST00000604689 RAP1GAPP47736 663 aa6.88□□□□□ -1.31
TUBE1-207ENST00000604689 CLCNKBP51801 687 aa6.88□□□□□ -1.31
TUBE1-207ENST00000604689 SMSP52788 366 aa6.88□□□□□ -1.31
TUBE1-207ENST00000604689 STXBP1P61764 594 aaKnown RBP6.88□□□□□ -1.31
TUBE1-207ENST00000604689 USP41Q3LFD5 358 aa6.88□□□□□ -1.31
TUBE1-207ENST00000604689 RIPPLY2Q5TAB7 128 aa6.88□□□□□ -1.31
TUBE1-207ENST00000604689 SLC25A25Q6KCM7 469 aa6.88□□□□□ -1.31
TUBE1-207ENST00000604689 METAP1DQ6UB28 335 aaPredicted RBP6.88□□□□□ -1.31
TUBE1-207ENST00000604689 VASH2Q86V25 355 aa6.88□□□□□ -1.31
TUBE1-207ENST00000604689 CTAGE3PQ8IX95 158 aa6.88□□□□□ -1.31
TUBE1-207ENST00000604689 TMEM35BQ8NCS4 154 aa6.88□□□□□ -1.31
TUBE1-207ENST00000604689 STXBP6Q8NFX7 210 aa6.88□□□□□ -1.31
TUBE1-207ENST00000604689 OR10T2Q8NGX3 314 aa6.88□□□□□ -1.31
TUBE1-207ENST00000604689 NDNFQ8TB73 568 aa6.88□□□□□ -1.31
TUBE1-207ENST00000604689 RLN3Q8WXF3 142 aa6.88□□□□□ -1.31
TUBE1-207ENST00000604689 TWNKQ96RR1 684 aa6.88□□□□□ -1.31
TUBE1-207ENST00000604689 ATG101Q9BSB4 218 aa6.88□□□□□ -1.31
TUBE1-207ENST00000604689 HDHD2Q9H0R4 259 aa6.88□□□□□ -1.31
TUBE1-207ENST00000604689 MTIF3Q9H2K0 278 aaKnown RBP6.88□□□□□ -1.31
TUBE1-207ENST00000604689 CATSPERBQ9H7T0 1116 aa6.88□□□□□ -1.31
TUBE1-207ENST00000604689 HCFC1R1Q9NWW0 138 aa6.88□□□□□ -1.31
TUBE1-207ENST00000604689 ANKFY1Q9P2R3 1169 aa6.88□□□□□ -1.31
TUBE1-207ENST00000604689 PCYOX1Q9UHG3 505 aa6.88□□□□□ -1.31
TUBE1-207ENST00000604689 ABT1Q9ULW3 272 aaKnown RBP6.88□□□□□ -1.31
TUBE1-207ENST00000604689 GSTK1Q9Y2Q3 226 aa6.88□□□□□ -1.31
TUBE1-207ENST00000604689 RHBDD3Q9Y3P4 386 aa6.88□□□□□ -1.31
TUBE1-207ENST00000604689 A0A0A6YYH2 397 aa6.88□□□□□ -1.31
TUBE1-207ENST00000604689 A6NJ64 397 aa6.88□□□□□ -1.31
TUBE1-207ENST00000604689 EFCAB7A8K855 629 aa6.88□□□□□ -1.31
TUBE1-207ENST00000604689 CYB561D2O14569 222 aa6.88□□□□□ -1.31
TUBE1-207ENST00000604689 ZNF208O43345 1280 aa6.88□□□□□ -1.31
TUBE1-207ENST00000604689 NUDT21O43809 227 aaKnown RBP6.88□□□□□ -1.31
TUBE1-207ENST00000604689 RSL1D1O76021 490 aaKnown RBP6.88□□□□□ -1.31
TUBE1-207ENST00000604689 H2AFB2P0C5Z0 115 aa6.88□□□□□ -1.31
TUBE1-207ENST00000604689 ALDH3B1P43353 468 aa6.88□□□□□ -1.31
TUBE1-207ENST00000604689 NPY4RP50391 375 aa6.88□□□□□ -1.31
TUBE1-207ENST00000604689 CHN2P52757 468 aa6.88□□□□□ -1.31
TUBE1-207ENST00000604689 CDH15P55291 814 aa6.88□□□□□ -1.31
TUBE1-207ENST00000604689 AP3S2P59780 193 aa6.88□□□□□ -1.31
TUBE1-207ENST00000604689 CXCR4P61073 352 aa6.88□□□□□ -1.31
TUBE1-207ENST00000604689 PLAURQ03405 335 aa6.88□□□□□ -1.31
TUBE1-207ENST00000604689 CSHL1Q14406 222 aa6.88□□□□□ -1.31
TUBE1-207ENST00000604689 IRF3Q14653 427 aa6.88□□□□□ -1.31
TUBE1-207ENST00000604689 DUSP7Q16829 419 aa6.88□□□□□ -1.31
TUBE1-207ENST00000604689 FLYWCH1Q4VC44 716 aa6.88□□□□□ -1.31
TUBE1-207ENST00000604689 HSD17B12Q53GQ0 312 aa6.88□□□□□ -1.31
TUBE1-207ENST00000604689 OTUD1Q5VV17 481 aaPredicted RBP6.88□□□□□ -1.31
TUBE1-207ENST00000604689 TTC23Q5W5X9 447 aa6.88□□□□□ -1.31
TUBE1-207ENST00000604689 BRAT1Q6PJG6 821 aa6.88□□□□□ -1.31
TUBE1-207ENST00000604689 LIPIQ6XZB0 460 aa6.88□□□□□ -1.31
TUBE1-207ENST00000604689 PTAR1Q7Z6K3 402 aaPredicted RBP6.88□□□□□ -1.31
TUBE1-207ENST00000604689 PDSS2Q86YH6 399 aa6.88□□□□□ -1.31
TUBE1-207ENST00000604689 SYT14Q8NB59 555 aa6.88□□□□□ -1.31
TUBE1-207ENST00000604689 CPA5Q8WXQ8 436 aa6.88□□□□□ -1.31
TUBE1-207ENST00000604689 SLC35C1Q96A29 364 aa6.88□□□□□ -1.31
TUBE1-207ENST00000604689 C16orf58Q96GQ5 468 aa6.88□□□□□ -1.31
TUBE1-207ENST00000604689 ZNF558Q96NG5 402 aa6.88□□□□□ -1.31
TUBE1-207ENST00000604689 WDFY2Q96P53 400 aa6.88□□□□□ -1.31
TUBE1-207ENST00000604689 DCBLD2Q96PD2 775 aa6.88□□□□□ -1.31
TUBE1-207ENST00000604689 PCDHB18PQ96TA0 734 aa6.88□□□□□ -1.31
TUBE1-207ENST00000604689 EBF4Q9BQW3 602 aa6.88□□□□□ -1.31
TUBE1-207ENST00000604689 TEKT3Q9BXF9 490 aa6.88□□□□□ -1.31
TUBE1-207ENST00000604689 RMND5AQ9H871 391 aa6.88□□□□□ -1.31
TUBE1-207ENST00000604689 CACNA2D2Q9NY47 1150 aa6.88□□□□□ -1.31
TUBE1-207ENST00000604689 NLGN3Q9NZ94 848 aa6.88□□□□□ -1.31
TUBE1-207ENST00000604689 GDF2Q9UK05 429 aaPredicted RBP6.88□□□□□ -1.31
TUBE1-207ENST00000604689 CDH9Q9ULB4 789 aa6.88□□□□□ -1.31
TUBE1-207ENST00000604689 ADGRA3Q8IWK6 1321 aa6.87□□□□□ -1.31
TUBE1-207ENST00000604689 ARFGEF1Q9Y6D6 1849 aa6.87□□□□□ -1.31
TUBE1-207ENST00000604689 A0A0A6YYC8 382 aaPredicted RBP6.87□□□□□ -1.31
TUBE1-207ENST00000604689 ZNF729A6NN14 1252 aaPredicted RBP6.87□□□□□ -1.31
TUBE1-207ENST00000604689 NPIPA2E9PIF3 369 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms