RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 SLC22A7Q9Y694 548 aa11.69□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 COL5A1P20908 1838 aaPredicted RBP11.69□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 CABIN1Q9Y6J0 2220 aa11.68□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 MN1Q10571 1320 aaPredicted RBP11.68□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 RHPN2P1A8MT19 583 aa11.68□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 SAP18O00422 153 aaKnown RBP11.68□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 TMPRSS11DO60235 418 aa11.68□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 CTSVO60911 334 aa11.68□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 KRT36O76013 467 aa11.68□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 IFI6P09912 130 aa11.68□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 FAM58BPP0C7Q3 252 aa11.68□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 MSL3P1P0C860 447 aa11.68□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 IL1RNP18510 177 aa11.68□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 TXNL4AP83876 142 aaKnown RBP11.68□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 VAC14Q08AM6 782 aa11.68□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 FADDQ13158 208 aa11.68□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 SQSTM1Q13501 440 aa11.68□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 TCEA2Q15560 299 aa11.68□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 CEBPEQ15744 281 aa11.68□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 CLPPQ16740 277 aaPredicted RBP11.68□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 DEFB133Q30KQ1 61 aa11.68□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 RABL3Q5HYI8 236 aa11.68□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 PACS2Q86VP3 889 aa11.68□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 KMT5CQ86Y97 462 aa11.68□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 PLD3Q8IV08 490 aa11.68□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 TMEM105Q8N8V8 129 aa11.68□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 ACOT4Q8N9L9 421 aa11.68□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 FAM181AQ8N9Y4 354 aa11.68□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 OR2T12Q8NG77 320 aa11.68□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 SLC26A7Q8TE54 656 aa11.68□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 ZBED6CLQ96FA7 236 aaPredicted RBP11.68□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 ZDHHC12Q96GR4 267 aa11.68□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 REXO5Q96IC2 774 aaKnown RBP11.68□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 LOXL4Q96JB6 756 aa11.68□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 ZNF583Q96ND8 569 aa11.68□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 ZNF285Q96NJ3 590 aa11.68□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 TRAPPC9Q96Q05 1148 aa11.68□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 NPLQ9BXD5 320 aaPredicted RBP11.68□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 GORASP2Q9H8Y8 452 aa11.68□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 LYRM4Q9HD34 91 aa11.68□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 EVA1BQ9NVM1 165 aa11.68□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 TAS2R9Q9NYW1 312 aa11.68□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 SH3BP4Q9P0V3 963 aa11.68□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 ASB4Q9Y574 426 aa11.68□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 SNX11Q9Y5W9 270 aa11.68□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 BLACEA4D250 179 aa11.67□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 CASQ2O14958 399 aaPredicted RBP11.67□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 ARPC2O15144 300 aa11.67□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 TOX3O15405 576 aaPredicted RBP11.67□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 HRO43593 1189 aa11.67□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 DUX1O43812 170 aa11.67□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 SH3BGRLO75368 114 aa11.67□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 GMNNO75496 209 aa11.67□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 SORBS2O94875 1100 aaKnown RBP11.67□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 CER1O95813 267 aa11.67□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 C9P02748 559 aa11.67□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 SERPIND1P05546 499 aa11.67□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 RETP07949 1114 aa11.67□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 GIMD1P0DJR0 217 aa11.67□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 ANPEPP15144 967 aa11.67□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 GGT1P19440 569 aa11.67□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 CDH3P22223 829 aa11.67□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 SLC7A1P30825 629 aa11.67□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 LSSP48449 732 aa11.67□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 GZMMP51124 257 aa11.67□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 PCBP4P57723 403 aaKnown RBP11.67□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 BNC1Q01954 994 aa11.67□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 SHBQ15464 509 aa11.67□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 ZNF385BQ569K4 471 aa11.67□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 GARNL3Q5VVW2 1013 aa11.67□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 TMEM214Q6NUQ4 689 aaKnown RBP11.67□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 ZNF793Q6ZN11 406 aa11.67□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 TRIM73Q86UV7 250 aa11.67□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 TICAM1Q8IUC6 712 aa11.67□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 SLC25A45Q8N413 288 aa11.67□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 RNF148Q8N7C7 305 aa11.67□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 OR4C6Q8NH72 309 aa11.67□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 ZFP28Q8NHY6 868 aa11.67□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 CDC26Q8NHZ8 85 aa11.67□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 UTP15Q8TED0 518 aaKnown RBP11.67□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 OR5P2Q8WZ92 322 aa11.67□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 GFM2Q969S9 779 aaKnown RBP11.67□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 RSRC1Q96IZ7 334 aaKnown RBP11.67□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 DPYSL5Q9BPU6 564 aa11.67□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 THUMPD3Q9BV44 507 aaKnown RBP11.67□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 VCX3BQ9H321 246 aa11.67□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 CAPN10Q9HC96 672 aa11.67□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 ARMC1Q9NVT9 282 aa11.67□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 UCKL1Q9NWZ5 548 aa11.67□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 BTBD3Q9Y2F9 522 aa11.67□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 NUP210LQ5VU65 1888 aa11.67□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 SCN3AQ9NY46 2000 aa11.67□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 A0A1W2PRB8 838 aa11.66□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 ELOVL7A1L3X0 281 aa11.66□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 H0YGG7 62 aa11.66□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 H3BNX3 289 aa11.66□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 CLIC1O00299 241 aa11.66□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 RTCAO00442 366 aaKnown RBP11.66□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 NVLO15381 856 aaKnown RBP11.66□□□□□ -0.54
NEDD8-MDP1-203ENST00000604306 PDPK1O15530 556 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms