RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 OR51I1Q9H343 314 aa9.28□□□□□ -0.92
CSMD1-217ENST00000602723 SLIT2O94813 1529 aa9.28□□□□□ -0.92
CSMD1-217ENST00000602723 AHCTF1Q8WYP5 2266 aa9.28□□□□□ -0.92
CSMD1-217ENST00000602723 WTIPA6NIX2 430 aaPredicted RBP9.28□□□□□ -0.92
CSMD1-217ENST00000602723 LAS2Q8IYD9 372 aa9.28□□□□□ -0.92
CSMD1-217ENST00000602723 FNDC8Q8TC99 324 aa9.28□□□□□ -0.92
CSMD1-217ENST00000602723 SYT4Q9H2B2 425 aa9.28□□□□□ -0.92
CSMD1-217ENST00000602723 ZNF182P17025 639 aaPredicted RBP9.28□□□□□ -0.92
CSMD1-217ENST00000602723 EDNRBP24530 442 aa9.28□□□□□ -0.92
CSMD1-217ENST00000602723 OR13C4Q8NGS5 318 aa9.28□□□□□ -0.92
CSMD1-217ENST00000602723 TMEM121BQ9BXQ6 578 aaPredicted RBP9.28□□□□□ -0.92
CSMD1-217ENST00000602723 PIGVQ9NUD9 493 aa9.28□□□□□ -0.92
CSMD1-217ENST00000602723 RIPK3Q9Y572 518 aa9.28□□□□□ -0.92
CSMD1-217ENST00000602723 MAFBQ9Y5Q3 323 aaPredicted RBP9.28□□□□□ -0.92
CSMD1-217ENST00000602723 TRIM64BA6NI03 449 aa9.28□□□□□ -0.92
CSMD1-217ENST00000602723 RGS9O75916 674 aaPredicted RBP9.28□□□□□ -0.92
CSMD1-217ENST00000602723 TOXO94900 526 aa9.28□□□□□ -0.92
CSMD1-217ENST00000602723 ADH6P28332 368 aa9.28□□□□□ -0.92
CSMD1-217ENST00000602723 NRIP1P48552 1158 aa9.28□□□□□ -0.92
CSMD1-217ENST00000602723 EVX2Q03828 476 aa9.28□□□□□ -0.92
CSMD1-217ENST00000602723 ZNF611Q8N823 705 aa9.28□□□□□ -0.92
CSMD1-217ENST00000602723 ARL14EPQ8N8R7 260 aaPredicted RBP9.28□□□□□ -0.92
CSMD1-217ENST00000602723 RPLP0P6Q8NHW5 317 aa9.28□□□□□ -0.92
CSMD1-217ENST00000602723 CNIH3Q8TBE1 160 aa9.28□□□□□ -0.92
CSMD1-217ENST00000602723 RDH12Q96NR8 316 aa9.28□□□□□ -0.92
CSMD1-217ENST00000602723 KCNA7Q96RP8 456 aa9.28□□□□□ -0.92
CSMD1-217ENST00000602723 EIF5A2Q9GZV4 153 aaKnown RBP9.28□□□□□ -0.92
CSMD1-217ENST00000602723 TPT1P8Q9HAU6 139 aa9.28□□□□□ -0.92
CSMD1-217ENST00000602723 TAC3Q9UHF0 121 aa9.28□□□□□ -0.92
CSMD1-217ENST00000602723 PCDHAC2Q9Y5I4 1007 aa9.28□□□□□ -0.92
CSMD1-217ENST00000602723 KIF26BQ2KJY2 2108 aa9.28□□□□□ -0.92
CSMD1-217ENST00000602723 LCHNA4D1U4 455 aa9.28□□□□□ -0.92
CSMD1-217ENST00000602723 TRAPPC6AO75865 159 aa9.28□□□□□ -0.92
CSMD1-217ENST00000602723 ARL14Q8N4G2 192 aa9.28□□□□□ -0.92
CSMD1-217ENST00000602723 OR4K17Q8NGC6 315 aa9.28□□□□□ -0.92
CSMD1-217ENST00000602723 CMKLR1Q99788 373 aa9.28□□□□□ -0.92
CSMD1-217ENST00000602723 ATG5Q9H1Y0 275 aa9.28□□□□□ -0.92
CSMD1-217ENST00000602723 PCDHGA8Q9Y5G5 932 aa9.28□□□□□ -0.92
CSMD1-217ENST00000602723 GVINP1Q7Z2Y8 2422 aa9.28□□□□□ -0.92
CSMD1-217ENST00000602723 NDUFS1P28331 727 aa9.28□□□□□ -0.92
CSMD1-217ENST00000602723 RPS24P62847 133 aaKnown RBP9.28□□□□□ -0.92
CSMD1-217ENST00000602723 TCEANCQ8N8B7 351 aa9.28□□□□□ -0.92
CSMD1-217ENST00000602723 PROKR1Q8TCW9 393 aa9.28□□□□□ -0.92
CSMD1-217ENST00000602723 NTAN1Q96AB6 310 aa9.28□□□□□ -0.92
CSMD1-217ENST00000602723 GPR22Q99680 433 aa9.28□□□□□ -0.92
CSMD1-217ENST00000602723 CARS2Q9HA77 564 aaKnown RBP9.28□□□□□ -0.92
CSMD1-217ENST00000602723 KHNYNO15037 678 aaKnown RBP9.28□□□□□ -0.92
CSMD1-217ENST00000602723 FAM189A1O60320 539 aa9.28□□□□□ -0.92
CSMD1-217ENST00000602723 CREBL2O60519 120 aaPredicted RBP9.28□□□□□ -0.92
CSMD1-217ENST00000602723 IL1R2P27930 398 aa9.28□□□□□ -0.92
CSMD1-217ENST00000602723 CLCNKAP51800 687 aa9.28□□□□□ -0.92
CSMD1-217ENST00000602723 CTBP2P56545 445 aa9.28□□□□□ -0.92
CSMD1-217ENST00000602723 CLRN1P58418 232 aa9.28□□□□□ -0.92
CSMD1-217ENST00000602723 CAMKVQ8NCB2 501 aa9.28□□□□□ -0.92
CSMD1-217ENST00000602723 FBXO22Q8NEZ5 403 aa9.28□□□□□ -0.92
CSMD1-217ENST00000602723 PLEKHO2Q8TD55 490 aa9.28□□□□□ -0.92
CSMD1-217ENST00000602723 PIP5K1AQ99755 562 aa9.28□□□□□ -0.92
CSMD1-217ENST00000602723 SUV39H2Q9H5I1 410 aa9.28□□□□□ -0.92
CSMD1-217ENST00000602723 MRM3Q9HC36 420 aaKnown RBP9.28□□□□□ -0.92
CSMD1-217ENST00000602723 IFT52Q9Y366 437 aa9.28□□□□□ -0.92
CSMD1-217ENST00000602723 PCLAFQ15004 111 aa9.28□□□□□ -0.92
CSMD1-217ENST00000602723 CHRNA6Q15825 494 aa9.28□□□□□ -0.92
CSMD1-217ENST00000602723 ZNF792Q3KQV3 632 aa9.28□□□□□ -0.92
CSMD1-217ENST00000602723 ZSWIM9Q86XI8 627 aa9.28□□□□□ -0.92
CSMD1-217ENST00000602723 NSMAFQ92636 917 aa9.28□□□□□ -0.92
CSMD1-217ENST00000602723 ACTR6Q9GZN1 396 aa9.28□□□□□ -0.92
CSMD1-217ENST00000602723 RHCGQ9UBD6 479 aa9.28□□□□□ -0.92
CSMD1-217ENST00000602723 MRPL3P09001 348 aaKnown RBP9.27□□□□□ -0.92
CSMD1-217ENST00000602723 ZNF763Q0D2J5 394 aa9.27□□□□□ -0.92
CSMD1-217ENST00000602723 SLC36A3Q495N2 470 aa9.27□□□□□ -0.92
CSMD1-217ENST00000602723 ADGRF1Q5T601 910 aa9.27□□□□□ -0.92
CSMD1-217ENST00000602723 TATDN1Q6P1N9 297 aa9.27□□□□□ -0.92
CSMD1-217ENST00000602723 C12orf40Q86WS4 652 aa9.27□□□□□ -0.92
CSMD1-217ENST00000602723 HMGB4Q8WW32 186 aa9.27□□□□□ -0.92
CSMD1-217ENST00000602723 APOBEC3GQ9HC16 384 aaKnown RBP9.27□□□□□ -0.92
CSMD1-217ENST00000602723 Q9N2J8 555 aa9.27□□□□□ -0.92
CSMD1-217ENST00000602723 SIX2Q9NPC8 291 aa9.27□□□□□ -0.92
CSMD1-217ENST00000602723 ZNF701Q9NV72 531 aaPredicted RBP9.27□□□□□ -0.92
CSMD1-217ENST00000602723 PAQR5Q9NXK6 330 aaPredicted RBP9.27□□□□□ -0.92
CSMD1-217ENST00000602723 MGAT4BQ9UQ53 548 aa9.27□□□□□ -0.92
CSMD1-217ENST00000602723 EMX2Q04743 252 aa9.27□□□□□ -0.92
CSMD1-217ENST00000602723 COL28A1Q2UY09 1125 aa9.27□□□□□ -0.92
CSMD1-217ENST00000602723 MSS51Q4VC12 460 aa9.27□□□□□ -0.92
CSMD1-217ENST00000602723 SLC35F1Q5T1Q4 408 aa9.27□□□□□ -0.92
CSMD1-217ENST00000602723 ATAD3CQ5T2N8 411 aa9.27□□□□□ -0.92
CSMD1-217ENST00000602723 SCML4Q8N228 414 aa9.27□□□□□ -0.92
CSMD1-217ENST00000602723 KIAA1191Q96A73 305 aa9.27□□□□□ -0.92
CSMD1-217ENST00000602723 KLHL15Q96M94 604 aa9.27□□□□□ -0.92
CSMD1-217ENST00000602723 FN3KQ9H479 309 aa9.27□□□□□ -0.92
CSMD1-217ENST00000602723 SCN11AQ9UI33 1791 aa9.27□□□□□ -0.93
CSMD1-217ENST00000602723 MAGEA3P43357 314 aa9.27□□□□□ -0.93
CSMD1-217ENST00000602723 MEDAGQ5VYS4 303 aa9.27□□□□□ -0.93
CSMD1-217ENST00000602723 CLEC20AQ6ZU45 233 aa9.27□□□□□ -0.93
CSMD1-217ENST00000602723 NFAT5O94916 1531 aa9.27□□□□□ -0.93
CSMD1-217ENST00000602723 IRAK2O43187 625 aa9.27□□□□□ -0.93
CSMD1-217ENST00000602723 LATS1O95835 1130 aa9.27□□□□□ -0.93
CSMD1-217ENST00000602723 GKN3PP0CG01 181 aa9.27□□□□□ -0.93
CSMD1-217ENST00000602723 FGL1Q08830 312 aa9.27□□□□□ -0.93
CSMD1-217ENST00000602723 TMPRSS9Q7Z410 1059 aa9.27□□□□□ -0.93
CSMD1-217ENST00000602723 BIRC8Q96P09 236 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms