RNA–Protein interactions for RNA: ENST00000600935.1

NUP62-222, Transcript of nucleoporin 62, human

TSL 4

Gene NUP62, Length 587 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP62-222	ENST00000600935	F7	P08709	466 aa	Predicted RBP	10.19	□□□□□ -0.78
NUP62-222	ENST00000600935	RFPL3S	P0C7P2	107 aa		10.19	□□□□□ -0.78
NUP62-222	ENST00000600935	CCL3	P10147	92 aa		10.19	□□□□□ -0.78
NUP62-222	ENST00000600935	MAGEA1	P43355	309 aa		10.19	□□□□□ -0.78
NUP62-222	ENST00000600935	RWDD2B	P57060	319 aa		10.19	□□□□□ -0.78
NUP62-222	ENST00000600935	PWP1	Q13610	501 aa		10.19	□□□□□ -0.78
NUP62-222	ENST00000600935	ACSF3	Q4G176	576 aa	Predicted RBP	10.19	□□□□□ -0.78
NUP62-222	ENST00000600935	PCID2	Q5JVF3	399 aa		10.19	□□□□□ -0.78
NUP62-222	ENST00000600935	MBOAT1	Q6ZNC8	495 aa		10.19	□□□□□ -0.78
NUP62-222	ENST00000600935	YTHDF3	Q7Z739	585 aa	Known RBP	10.19	□□□□□ -0.78
NUP62-222	ENST00000600935	PRUNE1	Q86TP1	453 aa		10.19	□□□□□ -0.78
NUP62-222	ENST00000600935	FBXW8	Q8N3Y1	598 aa		10.19	□□□□□ -0.78
NUP62-222	ENST00000600935	OR4K1	Q8NGD4	311 aa		10.19	□□□□□ -0.78
NUP62-222	ENST00000600935	UTP15	Q8TED0	518 aa	Known RBP	10.19	□□□□□ -0.78
NUP62-222	ENST00000600935	SREK1	Q8WXA9	508 aa	Known RBP	10.19	□□□□□ -0.78
NUP62-222	ENST00000600935	MFSD3	Q96ES6	412 aa		10.19	□□□□□ -0.78
NUP62-222	ENST00000600935	WDR83	Q9BRX9	315 aa	Known RBP	10.19	□□□□□ -0.78
NUP62-222	ENST00000600935	SPNS1	Q9H2V7	528 aa		10.19	□□□□□ -0.78
NUP62-222	ENST00000600935	LDAH	Q9H6V9	325 aa		10.19	□□□□□ -0.78
NUP62-222	ENST00000600935	ZNF703	Q9H7S9	590 aa	Predicted RBP	10.19	□□□□□ -0.78
NUP62-222	ENST00000600935	ATG4B	Q9Y4P1	393 aa		10.19	□□□□□ -0.78
NUP62-222	ENST00000600935	CLDN4	O14493	209 aa		10.18	□□□□□ -0.78
NUP62-222	ENST00000600935	SIAH2	O43255	324 aa		10.18	□□□□□ -0.78
NUP62-222	ENST00000600935	SMPD2	O60906	423 aa		10.18	□□□□□ -0.78
NUP62-222	ENST00000600935	VAPB	O95292	243 aa		10.18	□□□□□ -0.78
NUP62-222	ENST00000600935	EPPIN	O95925	133 aa		10.18	□□□□□ -0.78
NUP62-222	ENST00000600935	MBD3	O95983	291 aa		10.18	□□□□□ -0.78
NUP62-222	ENST00000600935	MPC1L	P0DKB6	136 aa		10.18	□□□□□ -0.78
NUP62-222	ENST00000600935	SMIM10L1	P0DMW3	83 aa		10.18	□□□□□ -0.78
NUP62-222	ENST00000600935	RNH1	P13489	461 aa	Known RBP	10.18	□□□□□ -0.78
NUP62-222	ENST00000600935	NPPB	P16860	134 aa		10.18	□□□□□ -0.78
NUP62-222	ENST00000600935	TIMP3	P35625	211 aa		10.18	□□□□□ -0.78
NUP62-222	ENST00000600935	CYLC1	P35663	651 aa	Predicted RBP	10.18	□□□□□ -0.78
NUP62-222	ENST00000600935	FDFT1	P37268	417 aa		10.18	□□□□□ -0.78
NUP62-222	ENST00000600935	HNRNPF	P52597	415 aa	Known RBP	10.18	□□□□□ -0.78
NUP62-222	ENST00000600935	HK2	P52789	917 aa		10.18	□□□□□ -0.78
NUP62-222	ENST00000600935	SESN2	P58004	480 aa	Predicted RBP	10.18	□□□□□ -0.78
NUP62-222	ENST00000600935	CBLB	Q13191	982 aa		10.18	□□□□□ -0.78
NUP62-222	ENST00000600935	TRIM14	Q14142	442 aa		10.18	□□□□□ -0.78
NUP62-222	ENST00000600935	OASL	Q15646	514 aa	Known RBP	10.18	□□□□□ -0.78
NUP62-222	ENST00000600935	CES3	Q6UWW8	571 aa		10.18	□□□□□ -0.78
NUP62-222	ENST00000600935	RTL4	Q6ZR62	310 aa		10.18	□□□□□ -0.78
NUP62-222	ENST00000600935	FAM47E	Q6ZV65	393 aa		10.18	□□□□□ -0.78
NUP62-222	ENST00000600935	CENPU	Q71F23	418 aa		10.18	□□□□□ -0.78
NUP62-222	ENST00000600935	PIWIL4	Q7Z3Z4	852 aa	Known RBP	10.18	□□□□□ -0.78
NUP62-222	ENST00000600935	MAATS1	Q7Z4T9	603 aa		10.18	□□□□□ -0.78
NUP62-222	ENST00000600935	C17orf64	Q86WR6	236 aa		10.18	□□□□□ -0.78
NUP62-222	ENST00000600935	KIF18B	Q86Y91	864 aa		10.18	□□□□□ -0.78
NUP62-222	ENST00000600935	CA13	Q8N1Q1	262 aa		10.18	□□□□□ -0.78
NUP62-222	ENST00000600935	GOLM1	Q8NBJ4	401 aa		10.18	□□□□□ -0.78
NUP62-222	ENST00000600935	TMEM52	Q8NDY8	209 aa		10.18	□□□□□ -0.78
NUP62-222	ENST00000600935	ABHD11	Q8NFV4	315 aa		10.18	□□□□□ -0.78
NUP62-222	ENST00000600935	PPP1R14C	Q8TAE6	165 aa		10.18	□□□□□ -0.78
NUP62-222	ENST00000600935	NT5C	Q8TCD5	201 aa		10.18	□□□□□ -0.78
NUP62-222	ENST00000600935	SMPDL3B	Q92485	455 aa		10.18	□□□□□ -0.78
NUP62-222	ENST00000600935	LRRC46	Q96FV0	321 aa		10.18	□□□□□ -0.78
NUP62-222	ENST00000600935	SMIM10	Q96HG1	83 aa		10.18	□□□□□ -0.78
NUP62-222	ENST00000600935	YIPF4	Q9BSR8	244 aa		10.18	□□□□□ -0.78
NUP62-222	ENST00000600935	SGPP1	Q9BX95	441 aa		10.18	□□□□□ -0.78
NUP62-222	ENST00000600935	PCBD2	Q9H0N5	130 aa		10.18	□□□□□ -0.78
NUP62-222	ENST00000600935	SLC6A15	Q9H2J7	730 aa		10.18	□□□□□ -0.78
NUP62-222	ENST00000600935	SH2D2A	Q9NP31	389 aa		10.18	□□□□□ -0.78
NUP62-222	ENST00000600935	PNO1	Q9NRX1	252 aa	Known RBP	10.18	□□□□□ -0.78
NUP62-222	ENST00000600935	ROS1	P08922	2347 aa		10.18	□□□□□ -0.78
NUP62-222	ENST00000600935	NIN	Q8N4C6	2090 aa		10.18	□□□□□ -0.78
NUP62-222	ENST00000600935	DSCAM	O60469	2012 aa		10.17	□□□□□ -0.78
NUP62-222	ENST00000600935	MBD3L4	A6NDZ8	208 aa	Predicted RBP	10.17	□□□□□ -0.78
NUP62-222	ENST00000600935	MBD3L5	A6NJ08	208 aa	Predicted RBP	10.17	□□□□□ -0.78
NUP62-222	ENST00000600935	LRRC3C	A6NJW4	275 aa		10.17	□□□□□ -0.78
NUP62-222	ENST00000600935	OR1F1	O43749	312 aa		10.17	□□□□□ -0.78
NUP62-222	ENST00000600935	ZBTB14	O43829	449 aa		10.17	□□□□□ -0.78
NUP62-222	ENST00000600935	ETS1	P14921	441 aa		10.17	□□□□□ -0.78
NUP62-222	ENST00000600935	PIGA	P37287	484 aa		10.17	□□□□□ -0.78
NUP62-222	ENST00000600935	AGFG1	P52594	562 aa	Known RBP	10.17	□□□□□ -0.78
NUP62-222	ENST00000600935	RAB8A	P61006	207 aa		10.17	□□□□□ -0.78
NUP62-222	ENST00000600935	CATSPERE	Q5SY80	951 aa		10.17	□□□□□ -0.78
NUP62-222	ENST00000600935	RNF187	Q5TA31	235 aa	Predicted RBP	10.17	□□□□□ -0.78
NUP62-222	ENST00000600935	HECTD2	Q5U5R9	776 aa		10.17	□□□□□ -0.78
NUP62-222	ENST00000600935	MRNIP	Q6NTE8	343 aa		10.17	□□□□□ -0.78
NUP62-222	ENST00000600935	ZNF549	Q6P9A3	640 aa		10.17	□□□□□ -0.78
NUP62-222	ENST00000600935	LCTL	Q6UWM7	567 aa		10.17	□□□□□ -0.78
NUP62-222	ENST00000600935	UBE2R2	Q712K3	238 aa	Predicted RBP	10.17	□□□□□ -0.78
NUP62-222	ENST00000600935	STRA8	Q7Z7C7	330 aa		10.17	□□□□□ -0.78
NUP62-222	ENST00000600935	OTUD6B	Q8N6M0	293 aa		10.17	□□□□□ -0.78
NUP62-222	ENST00000600935	ZNF321P	Q8N8H1	164 aa		10.17	□□□□□ -0.78
NUP62-222	ENST00000600935	NEIL3	Q8TAT5	605 aa		10.17	□□□□□ -0.78
NUP62-222	ENST00000600935	ATG4A	Q8WYN0	398 aa		10.17	□□□□□ -0.78
NUP62-222	ENST00000600935	DACH2	Q96NX9	599 aa		10.17	□□□□□ -0.78
NUP62-222	ENST00000600935	TCF12	Q99081	682 aa		10.17	□□□□□ -0.78
NUP62-222	ENST00000600935	CCDC77	Q9BR77	488 aa		10.17	□□□□□ -0.78
NUP62-222	ENST00000600935	RHBG	Q9H310	441 aa		10.17	□□□□□ -0.78
NUP62-222	ENST00000600935	EPB41L4B	Q9H329	900 aa		10.17	□□□□□ -0.78
NUP62-222	ENST00000600935	KLHL31	Q9H511	634 aa		10.17	□□□□□ -0.78
NUP62-222	ENST00000600935	CLK4	Q9HAZ1	481 aa	Known RBP	10.17	□□□□□ -0.78
NUP62-222	ENST00000600935	PROK2	Q9HC23	129 aa		10.17	□□□□□ -0.78
NUP62-222	ENST00000600935	RAB6B	Q9NRW1	208 aa		10.17	□□□□□ -0.78
NUP62-222	ENST00000600935	SACM1L	Q9NTJ5	587 aa		10.17	□□□□□ -0.78
NUP62-222	ENST00000600935	KLHL42	Q9P2K6	505 aa		10.17	□□□□□ -0.78
NUP62-222	ENST00000600935	ADAMTS6	Q9UKP5	1117 aa		10.17	□□□□□ -0.78
NUP62-222	ENST00000600935	MMACHC	Q9Y4U1	282 aa		10.17	□□□□□ -0.78

Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms