RNA–Protein interactions for RNA: ENST00000599938.5

ZNF558-206, Transcript of zinc finger protein 558, humanhuman

TSL 5

Gene ZNF558, Length 780 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-206ENST00000599938 RAB38P57729 211 aa26.44■■□□□ 1.82
ZNF558-206ENST00000599938 ZNF169Q14929 603 aaPredicted RBP26.44■■□□□ 1.82
ZNF558-206ENST00000599938 SRFBP1Q8NEF9 429 aaKnown RBP26.44■■□□□ 1.82
ZNF558-206ENST00000599938 ARMC2Q8NEN0 867 aa26.44■■□□□ 1.82
ZNF558-206ENST00000599938 MRPL57Q9BQC6 102 aaKnown RBP26.44■■□□□ 1.82
ZNF558-206ENST00000599938 MRPL46Q9H2W6 279 aaKnown RBP26.44■■□□□ 1.82
ZNF558-206ENST00000599938 IPPKQ9H8X2 491 aa26.44■■□□□ 1.82
ZNF558-206ENST00000599938 PSMC3IPQ9P2W1 217 aaPredicted RBP26.44■■□□□ 1.82
ZNF558-206ENST00000599938 TEKT2Q9UIF3 430 aa26.44■■□□□ 1.82
ZNF558-206ENST00000599938 MMACHCQ9Y4U1 282 aa26.44■■□□□ 1.82
ZNF558-206ENST00000599938 LRRK2Q5S007 2527 aa26.44■■□□□ 1.82
ZNF558-206ENST00000599938 IGKV3D-11A0A0A0MRZ8 115 aa26.43■■□□□ 1.82
ZNF558-206ENST00000599938 STX16-NPEPL1H3BU86 382 aa26.43■■□□□ 1.82
ZNF558-206ENST00000599938 STX16O14662 325 aa26.43■■□□□ 1.82
ZNF558-206ENST00000599938 UGDHO60701 494 aa26.43■■□□□ 1.82
ZNF558-206ENST00000599938 SH3BGRLO75368 114 aa26.43■■□□□ 1.82
ZNF558-206ENST00000599938 ARL1P40616 181 aaPredicted RBP26.43■■□□□ 1.82
ZNF558-206ENST00000599938 TLR1Q15399 786 aa26.43■■□□□ 1.82
ZNF558-206ENST00000599938 TMEM35AQ53FP2 167 aa26.43■■□□□ 1.82
ZNF558-206ENST00000599938 ABHD17BQ5VST6 288 aa26.43■■□□□ 1.82
ZNF558-206ENST00000599938 LIPJQ5W064 366 aa26.43■■□□□ 1.82
ZNF558-206ENST00000599938 TIFABQ6ZNK6 161 aa26.43■■□□□ 1.82
ZNF558-206ENST00000599938 CYP4X1Q8N118 509 aa26.43■■□□□ 1.82
ZNF558-206ENST00000599938 CISD2Q8N5K1 135 aaKnown RBP26.43■■□□□ 1.82
ZNF558-206ENST00000599938 FAM47BQ8NA70 645 aa26.43■■□□□ 1.82
ZNF558-206ENST00000599938 ROGDIQ9GZN7 287 aa26.43■■□□□ 1.82
ZNF558-206ENST00000599938 KCNK13Q9HB14 408 aa26.43■■□□□ 1.82
ZNF558-206ENST00000599938 FETUBQ9UGM5 382 aa26.43■■□□□ 1.82
ZNF558-206ENST00000599938 MRPS33Q9Y291 106 aaKnown RBP26.43■■□□□ 1.82
ZNF558-206ENST00000599938 ASH1LQ9NR48 2969 aaKnown RBP26.43■■□□□ 1.82
ZNF558-206ENST00000599938 IQANK1A0A1B0GTG1 560 aa26.42■■□□□ 1.82
ZNF558-206ENST00000599938 TCRBV16S1A1N1A0A5B0 115 aa26.42■■□□□ 1.82
ZNF558-206ENST00000599938 A8MUI8 341 aa26.42■■□□□ 1.82
ZNF558-206ENST00000599938 TGFB1P01137 390 aa26.42■■□□□ 1.82
ZNF558-206ENST00000599938 ZNF33BQ06732 778 aa26.42■■□□□ 1.82
ZNF558-206ENST00000599938 GALNT11Q8NCW6 608 aa26.42■■□□□ 1.82
ZNF558-206ENST00000599938 HUS1BQ8NHY5 278 aa26.42■■□□□ 1.82
ZNF558-206ENST00000599938 M1APQ8TC57 530 aa26.42■■□□□ 1.82
ZNF558-206ENST00000599938 REPS1Q96D71 796 aa26.42■■□□□ 1.82
ZNF558-206ENST00000599938 SNRNP40Q96DI7 357 aaKnown RBP26.42■■□□□ 1.82
ZNF558-206ENST00000599938 CMTM7Q96FZ5 175 aa26.42■■□□□ 1.82
ZNF558-206ENST00000599938 SLC29A3Q9BZD2 475 aa26.42■■□□□ 1.82
ZNF558-206ENST00000599938 MMP25Q9NPA2 562 aa26.42■■□□□ 1.82
ZNF558-206ENST00000599938 DMRT3Q9NQL9 472 aa26.42■■□□□ 1.82
ZNF558-206ENST00000599938 NECTIN3Q9NQS3 549 aa26.42■■□□□ 1.82
ZNF558-206ENST00000599938 PLA2G3Q9NZ20 509 aa26.42■■□□□ 1.82
ZNF558-206ENST00000599938 ADGRE2Q9UHX3 823 aa26.42■■□□□ 1.82
ZNF558-206ENST00000599938 PCDHGA11Q9Y5H2 935 aa26.42■■□□□ 1.82
ZNF558-206ENST00000599938 TNFRSF8P28908 595 aa26.41■■□□□ 1.82
ZNF558-206ENST00000599938 LIM2P55344 173 aa26.41■■□□□ 1.82
ZNF558-206ENST00000599938 SLC26A5P58743 744 aa26.41■■□□□ 1.82
ZNF558-206ENST00000599938 PHEXP78562 749 aa26.41■■□□□ 1.82
ZNF558-206ENST00000599938 RCN2Q14257 317 aa26.41■■□□□ 1.82
ZNF558-206ENST00000599938 CHSY3Q70JA7 882 aa26.41■■□□□ 1.82
ZNF558-206ENST00000599938 UBE3DQ7Z6J8 389 aa26.41■■□□□ 1.82
ZNF558-206ENST00000599938 RNF175Q8N4F7 328 aa26.41■■□□□ 1.82
ZNF558-206ENST00000599938 C19orf60Q96EN9 201 aa26.41■■□□□ 1.82
ZNF558-206ENST00000599938 CSF3RQ99062 836 aa26.41■■□□□ 1.82
ZNF558-206ENST00000599938 TBCDQ9BTW9 1192 aa26.41■■□□□ 1.82
ZNF558-206ENST00000599938 OR51B5Q9H339 312 aa26.41■■□□□ 1.82
ZNF558-206ENST00000599938 NOL11Q9H8H0 719 aaKnown RBP26.41■■□□□ 1.82
ZNF558-206ENST00000599938 PRDM7Q9NQW5 492 aa26.41■■□□□ 1.82
ZNF558-206ENST00000599938 PRTFDC1Q9NRG1 225 aa26.41■■□□□ 1.82
ZNF558-206ENST00000599938 PCTPQ9UKL6 214 aa26.41■■□□□ 1.82
ZNF558-206ENST00000599938 DAPP1Q9UN19 280 aa26.41■■□□□ 1.82
ZNF558-206ENST00000599938 SAP18O00422 153 aaKnown RBP26.4■■□□□ 1.82
ZNF558-206ENST00000599938 RTCAO00442 366 aaKnown RBP26.4■■□□□ 1.82
ZNF558-206ENST00000599938 CLDN4O14493 209 aa26.4■■□□□ 1.82
ZNF558-206ENST00000599938 F10P00742 488 aa26.4■■□□□ 1.82
ZNF558-206ENST00000599938 PIK3CBP42338 1070 aa26.4■■□□□ 1.82
ZNF558-206ENST00000599938 SSR2P43308 183 aa26.4■■□□□ 1.82
ZNF558-206ENST00000599938 HNRNPFP52597 415 aaKnown RBP26.4■■□□□ 1.82
ZNF558-206ENST00000599938 SLC13A2Q13183 592 aa26.4■■□□□ 1.82
ZNF558-206ENST00000599938 CPSF6Q16630 551 aaKnown RBP eCLIP26.4■■□□□ 1.82
ZNF558-206ENST00000599938 KHDRBS2Q5VWX1 349 aaKnown RBP26.4■■□□□ 1.82
ZNF558-206ENST00000599938 ZNF793Q6ZN11 406 aa26.4■■□□□ 1.82
ZNF558-206ENST00000599938 SCUBE1Q8IWY4 988 aa26.4■■□□□ 1.82
ZNF558-206ENST00000599938 CATSPER1Q8NEC5 780 aa26.4■■□□□ 1.82
ZNF558-206ENST00000599938 UBLCP1Q8WVY7 318 aaPredicted RBP26.4■■□□□ 1.82
ZNF558-206ENST00000599938 ATP6V1E2Q96A05 226 aa26.4■■□□□ 1.82
ZNF558-206ENST00000599938 MTERF1Q99551 399 aaKnown RBP26.4■■□□□ 1.82
ZNF558-206ENST00000599938 CCDC77Q9BR77 488 aa26.4■■□□□ 1.82
ZNF558-206ENST00000599938 CENPKQ9BS16 269 aa26.4■■□□□ 1.82
ZNF558-206ENST00000599938 ASF1BQ9NVP2 202 aa26.4■■□□□ 1.82
ZNF558-206ENST00000599938 RNF11Q9Y3C5 154 aa26.4■■□□□ 1.82
ZNF558-206ENST00000599938 SAGE2PA6NJ88 616 aa26.39■■□□□ 1.82
ZNF558-206ENST00000599938 H0YIV9 168 aa26.39■■□□□ 1.82
ZNF558-206ENST00000599938 ATP5A1P25705 553 aaKnown RBP26.39■■□□□ 1.82
ZNF558-206ENST00000599938 TSFMP43897 325 aaKnown RBP26.39■■□□□ 1.82
ZNF558-206ENST00000599938 UQCRFS1P47985 274 aa26.39■■□□□ 1.82
ZNF558-206ENST00000599938 CCNG1P51959 295 aa26.39■■□□□ 1.82
ZNF558-206ENST00000599938 RAP1GDS1P52306 607 aa26.39■■□□□ 1.82
ZNF558-206ENST00000599938 FCRLBQ6BAA4 426 aa26.39■■□□□ 1.82
ZNF558-206ENST00000599938 ZNF595Q8IYB9 648 aa26.39■■□□□ 1.82
ZNF558-206ENST00000599938 ACOT4Q8N9L9 421 aa26.39■■□□□ 1.82
ZNF558-206ENST00000599938 L3MBTL4Q8NA19 623 aa26.39■■□□□ 1.82
ZNF558-206ENST00000599938 TMEM52Q8NDY8 209 aa26.39■■□□□ 1.82
ZNF558-206ENST00000599938 OR52B6Q8NGF0 335 aa26.39■■□□□ 1.82
ZNF558-206ENST00000599938 CDK15Q96Q40 435 aa26.39■■□□□ 1.82
ZNF558-206ENST00000599938 RNF32Q9H0A6 362 aa26.39■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms