RNA–Protein interactions for RNA: ENST00000599044.1

CCDC61-207, Transcript of coiled-coil domain containing 61, humanhuman

TSL 2

Gene CCDC61, Length 849 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-207ENST00000599044 TSPAN17Q96FV3 270 aa21.4■■□□□ 1.02
CCDC61-207ENST00000599044 FAR2Q96K12 515 aa21.4■■□□□ 1.02
CCDC61-207ENST00000599044 NT5DC2Q9H857 520 aa21.4■■□□□ 1.02
CCDC61-207ENST00000599044 GPRC5BQ9NZH0 403 aa21.4■■□□□ 1.02
CCDC61-207ENST00000599044 ZNF223Q9UK11 482 aaPredicted RBP21.4■■□□□ 1.02
CCDC61-207ENST00000599044 PTBP2Q9UKA9 531 aaKnown RBP21.4■■□□□ 1.02
CCDC61-207ENST00000599044 NPIPA5E9PKD4 350 aa21.39■■□□□ 1.01
CCDC61-207ENST00000599044 SLC19A2O60779 497 aa21.39■■□□□ 1.01
CCDC61-207ENST00000599044 SLU7O95391 586 aaKnown RBP21.39■■□□□ 1.01
CCDC61-207ENST00000599044 GRNP28799 593 aaKnown RBP21.39■■□□□ 1.01
CCDC61-207ENST00000599044 C3AR1Q16581 482 aa21.39■■□□□ 1.01
CCDC61-207ENST00000599044 MAPKAPK3Q16644 382 aa21.39■■□□□ 1.01
CCDC61-207ENST00000599044 ADPRMQ3LIE5 342 aa21.39■■□□□ 1.01
CCDC61-207ENST00000599044 KBTBD12Q3ZCT8 623 aa21.39■■□□□ 1.01
CCDC61-207ENST00000599044 CMC1Q7Z7K0 106 aa21.39■■□□□ 1.01
CCDC61-207ENST00000599044 SIAH3Q8IW03 269 aa21.39■■□□□ 1.01
CCDC61-207ENST00000599044 SCUBE1Q8IWY4 988 aa21.39■■□□□ 1.01
CCDC61-207ENST00000599044 CTAGE3PQ8IX95 158 aa21.39■■□□□ 1.01
CCDC61-207ENST00000599044 KRT78Q8N1N4 520 aa21.39■■□□□ 1.01
CCDC61-207ENST00000599044 SNX31Q8N9S9 440 aa21.39■■□□□ 1.01
CCDC61-207ENST00000599044 FAM47BQ8NA70 645 aa21.39■■□□□ 1.01
CCDC61-207ENST00000599044 THAP3Q8WTV1 239 aaPredicted RBP21.39■■□□□ 1.01
CCDC61-207ENST00000599044 GPR137Q96N19 417 aa21.39■■□□□ 1.01
CCDC61-207ENST00000599044 ZDHHC18Q9NUE0 388 aa21.39■■□□□ 1.01
CCDC61-207ENST00000599044 CD274Q9NZQ7 290 aa21.39■■□□□ 1.01
CCDC61-207ENST00000599044 TXNDC16Q9P2K2 825 aa21.39■■□□□ 1.01
CCDC61-207ENST00000599044 NPIPA1Q9UND3 350 aa21.39■■□□□ 1.01
CCDC61-207ENST00000599044 CSMD1Q96PZ7 3565 aa21.39■■□□□ 1.01
CCDC61-207ENST00000599044 MYOCOSA0A1B0GUC4 107 aa21.38■■□□□ 1.01
CCDC61-207ENST00000599044 ARHGAP10A1A4S6 786 aa21.38■■□□□ 1.01
CCDC61-207ENST00000599044 CLEC3AO75596 197 aa21.38■■□□□ 1.01
CCDC61-207ENST00000599044 STK16O75716 305 aa21.38■■□□□ 1.01
CCDC61-207ENST00000599044 MYO1DO94832 1006 aa21.38■■□□□ 1.01
CCDC61-207ENST00000599044 PRF1P14222 555 aa21.38■■□□□ 1.01
CCDC61-207ENST00000599044 RAB10P61026 200 aa21.38■■□□□ 1.01
CCDC61-207ENST00000599044 ATP6V0D1P61421 351 aa21.38■■□□□ 1.01
CCDC61-207ENST00000599044 ALDH6A1Q02252 535 aaKnown RBP21.38■■□□□ 1.01
CCDC61-207ENST00000599044 XKR6Q5GH73 641 aa21.38■■□□□ 1.01
CCDC61-207ENST00000599044 SULT1C3Q6IMI6 304 aa21.38■■□□□ 1.01
CCDC61-207ENST00000599044 TCAIMQ8N3R3 496 aa21.38■■□□□ 1.01
CCDC61-207ENST00000599044 PPM1NQ8N819 430 aa21.38■■□□□ 1.01
CCDC61-207ENST00000599044 TMEM178AQ8NBL3 297 aa21.38■■□□□ 1.01
CCDC61-207ENST00000599044 PDPRQ8NCN5 879 aa21.38■■□□□ 1.01
CCDC61-207ENST00000599044 TTLQ8NG68 377 aa21.38■■□□□ 1.01
CCDC61-207ENST00000599044 EXT2Q93063 718 aa21.38■■□□□ 1.01
CCDC61-207ENST00000599044 KIAA1191Q96A73 305 aa21.38■■□□□ 1.01
CCDC61-207ENST00000599044 WDR34Q96EX3 536 aa21.38■■□□□ 1.01
CCDC61-207ENST00000599044 F2RL3Q96RI0 385 aa21.38■■□□□ 1.01
CCDC61-207ENST00000599044 CSF3RQ99062 836 aa21.38■■□□□ 1.01
CCDC61-207ENST00000599044 NPLQ9BXD5 320 aaPredicted RBP21.38■■□□□ 1.01
CCDC61-207ENST00000599044 CAPS2Q9BXY5 557 aa21.38■■□□□ 1.01
CCDC61-207ENST00000599044 DEFB126Q9BYW3 111 aa21.38■■□□□ 1.01
CCDC61-207ENST00000599044 REXO4Q9GZR2 422 aaKnown RBP21.38■■□□□ 1.01
CCDC61-207ENST00000599044 EHD1Q9H4M9 534 aa21.38■■□□□ 1.01
CCDC61-207ENST00000599044 TRIM45Q9H8W5 580 aaPredicted RBP21.38■■□□□ 1.01
CCDC61-207ENST00000599044 PNO1Q9NRX1 252 aaKnown RBP21.38■■□□□ 1.01
CCDC61-207ENST00000599044 TINAGQ9UJW2 476 aa21.38■■□□□ 1.01
CCDC61-207ENST00000599044 MMACHCQ9Y4U1 282 aa21.38■■□□□ 1.01
CCDC61-207ENST00000599044 TEP1Q99973 2627 aaKnown RBP21.38■■□□□ 1.01
CCDC61-207ENST00000599044 TRBV11-1A0A0K0K1C0 115 aa21.37■■□□□ 1.01
CCDC61-207ENST00000599044 ANKDD1BA6NHY2 528 aa21.37■■□□□ 1.01
CCDC61-207ENST00000599044 PRSS44E7EML9 344 aa21.37■■□□□ 1.01
CCDC61-207ENST00000599044 CLGNO14967 610 aa21.37■■□□□ 1.01
CCDC61-207ENST00000599044 SLC25A12O75746 678 aa21.37■■□□□ 1.01
CCDC61-207ENST00000599044 CERS1P27544 350 aa21.37■■□□□ 1.01
CCDC61-207ENST00000599044 GPR143P51810 404 aa21.37■■□□□ 1.01
CCDC61-207ENST00000599044 RAB38P57729 211 aa21.37■■□□□ 1.01
CCDC61-207ENST00000599044 HSF1Q00613 529 aa21.37■■□□□ 1.01
CCDC61-207ENST00000599044 CAV1Q03135 178 aa21.37■■□□□ 1.01
CCDC61-207ENST00000599044 ILF2Q12905 390 aaKnown RBP21.37■■□□□ 1.01
CCDC61-207ENST00000599044 EFTUD2Q15029 972 aaKnown RBP eCLIP21.37■■□□□ 1.01
CCDC61-207ENST00000599044 CDKL4Q5MAI5 379 aa21.37■■□□□ 1.01
CCDC61-207ENST00000599044 ABHD17CQ6PCB6 329 aa21.37■■□□□ 1.01
CCDC61-207ENST00000599044 UBE3DQ7Z6J8 389 aa21.37■■□□□ 1.01
CCDC61-207ENST00000599044 CLNKQ7Z7G1 428 aa21.37■■□□□ 1.01
CCDC61-207ENST00000599044 CCDC25Q86WR0 208 aa21.37■■□□□ 1.01
CCDC61-207ENST00000599044 ARMC10Q8N2F6 343 aa21.37■■□□□ 1.01
CCDC61-207ENST00000599044 CPSF7Q8N684 471 aaKnown RBP21.37■■□□□ 1.01
CCDC61-207ENST00000599044 B3GNT7Q8NFL0 401 aa21.37■■□□□ 1.01
CCDC61-207ENST00000599044 OR2L5Q8NG80 312 aa21.37■■□□□ 1.01
CCDC61-207ENST00000599044 ALG9Q9H6U8 611 aa21.37■■□□□ 1.01
CCDC61-207ENST00000599044 CNOT10Q9H9A5 744 aaKnown RBP21.37■■□□□ 1.01
CCDC61-207ENST00000599044 PRDM7Q9NQW5 492 aa21.37■■□□□ 1.01
CCDC61-207ENST00000599044 PRTFDC1Q9NRG1 225 aa21.37■■□□□ 1.01
CCDC61-207ENST00000599044 ZNF835Q9Y2P0 537 aa21.37■■□□□ 1.01
CCDC61-207ENST00000599044 PKDREJQ9NTG1 2253 aa21.36■■□□□ 1.01
CCDC61-207ENST00000599044 CYR61O00622 381 aa21.36■■□□□ 1.01
CCDC61-207ENST00000599044 B3GALT2O43825 422 aa21.36■■□□□ 1.01
CCDC61-207ENST00000599044 PRKNO60260 465 aaPredicted RBP21.36■■□□□ 1.01
CCDC61-207ENST00000599044 NME2P1O60361 137 aa21.36■■□□□ 1.01
CCDC61-207ENST00000599044 CCNT2O60583 730 aaKnown RBP21.36■■□□□ 1.01
CCDC61-207ENST00000599044 SLC35E2BP0CK96 405 aa21.36■■□□□ 1.01
CCDC61-207ENST00000599044 NME2P22392 152 aa21.36■■□□□ 1.01
CCDC61-207ENST00000599044 TRHRP34981 398 aaPredicted RBP21.36■■□□□ 1.01
CCDC61-207ENST00000599044 MAGEA4P43358 317 aa21.36■■□□□ 1.01
CCDC61-207ENST00000599044 CYB561P49447 251 aa21.36■■□□□ 1.01
CCDC61-207ENST00000599044 HLCSP50747 726 aa21.36■■□□□ 1.01
CCDC61-207ENST00000599044 LIM2P55344 173 aa21.36■■□□□ 1.01
CCDC61-207ENST00000599044 PDK4Q16654 411 aa21.36■■□□□ 1.01
CCDC61-207ENST00000599044 GRTP1Q5TC63 336 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms