RNA–Protein interactions for RNA: ENST00000597423.1

TRIM28-209, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-209ENST00000597423 FAM174BQ3ZCQ3 159 aa14.47□□□□□ -0.09
TRIM28-209ENST00000597423 VPS26BQ4G0F5 336 aa14.47□□□□□ -0.09
TRIM28-209ENST00000597423 DNAL1Q4LDG9 190 aa14.47□□□□□ -0.09
TRIM28-209ENST00000597423 C16orf89Q6UX73 402 aa14.47□□□□□ -0.09
TRIM28-209ENST00000597423 KRTCAP2Q8N6L1 136 aa14.47□□□□□ -0.09
TRIM28-209ENST00000597423 AGBL5Q8NDL9 886 aa14.47□□□□□ -0.09
TRIM28-209ENST00000597423 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.47□□□□□ -0.09
TRIM28-209ENST00000597423 ZCCHC10Q8TBK6 192 aa14.47□□□□□ -0.09
TRIM28-209ENST00000597423 GFM2Q969S9 779 aaKnown RBP14.47□□□□□ -0.09
TRIM28-209ENST00000597423 ROPN1LQ96C74 230 aa14.47□□□□□ -0.09
TRIM28-209ENST00000597423 PPCDCQ96CD2 204 aa14.47□□□□□ -0.09
TRIM28-209ENST00000597423 EGLN2Q96KS0 407 aa14.47□□□□□ -0.09
TRIM28-209ENST00000597423 TEX37Q96LM6 180 aa14.47□□□□□ -0.09
TRIM28-209ENST00000597423 OR52E6Q96RD3 313 aa14.47□□□□□ -0.09
TRIM28-209ENST00000597423 BTBD10Q9BSF8 475 aa14.47□□□□□ -0.09
TRIM28-209ENST00000597423 NDC1Q9BTX1 674 aa14.47□□□□□ -0.09
TRIM28-209ENST00000597423 SORBS1Q9BX66 1292 aaKnown RBP14.47□□□□□ -0.09
TRIM28-209ENST00000597423 STRADBQ9C0K7 418 aa14.47□□□□□ -0.09
TRIM28-209ENST00000597423 ACTL8Q9H568 366 aa14.47□□□□□ -0.09
TRIM28-209ENST00000597423 LHX9Q9NQ69 397 aa14.47□□□□□ -0.09
TRIM28-209ENST00000597423 PRDM9Q9NQV7 894 aa14.47□□□□□ -0.09
TRIM28-209ENST00000597423 FGF21Q9NSA1 209 aa14.47□□□□□ -0.09
TRIM28-209ENST00000597423 STARD5Q9NSY2 213 aa14.47□□□□□ -0.09
TRIM28-209ENST00000597423 EHD3Q9NZN3 535 aa14.47□□□□□ -0.09
TRIM28-209ENST00000597423 SH3BP4Q9P0V3 963 aa14.47□□□□□ -0.09
TRIM28-209ENST00000597423 ARID1BQ8NFD5 2236 aaPredicted RBP14.47□□□□□ -0.09
TRIM28-209ENST00000597423 A0A0G2JN53 185 aa14.46□□□□□ -0.09
TRIM28-209ENST00000597423 GABRR3A8MPY1 467 aa14.46□□□□□ -0.09
TRIM28-209ENST00000597423 MRASO14807 208 aa14.46□□□□□ -0.09
TRIM28-209ENST00000597423 SCAMP2O15127 329 aaKnown RBP14.46□□□□□ -0.09
TRIM28-209ENST00000597423 GALR3O60755 368 aaPredicted RBP14.46□□□□□ -0.09
TRIM28-209ENST00000597423 TBX19O60806 448 aa14.46□□□□□ -0.09
TRIM28-209ENST00000597423 SLC34A2O95436 690 aa14.46□□□□□ -0.09
TRIM28-209ENST00000597423 IL3P08700 152 aa14.46□□□□□ -0.09
TRIM28-209ENST00000597423 DDCP20711 480 aa14.46□□□□□ -0.09
TRIM28-209ENST00000597423 IL12AP29459 219 aa14.46□□□□□ -0.09
TRIM28-209ENST00000597423 BUD31P41223 144 aaPredicted RBP14.46□□□□□ -0.09
TRIM28-209ENST00000597423 LIMK1P53667 647 aa14.46□□□□□ -0.09
TRIM28-209ENST00000597423 ZFP36L1Q07352 338 aaKnown RBP14.46□□□□□ -0.09
TRIM28-209ENST00000597423 ACTN3Q08043 901 aaPredicted RBP14.46□□□□□ -0.09
TRIM28-209ENST00000597423 KCNAB1Q14722 419 aa14.46□□□□□ -0.09
TRIM28-209ENST00000597423 TRIP6Q15654 476 aaKnown RBP14.46□□□□□ -0.09
TRIM28-209ENST00000597423 GPR19Q15760 415 aa14.46□□□□□ -0.09
TRIM28-209ENST00000597423 MRM1Q6IN84 353 aaKnown RBP14.46□□□□□ -0.09
TRIM28-209ENST00000597423 CAMKMTQ7Z624 323 aa14.46□□□□□ -0.09
TRIM28-209ENST00000597423 SLITRK4Q8IW52 837 aa14.46□□□□□ -0.09
TRIM28-209ENST00000597423 OR8J2Q8NGG1 315 aa14.46□□□□□ -0.09
TRIM28-209ENST00000597423 ADAMTS18Q8TE60 1221 aa14.46□□□□□ -0.09
TRIM28-209ENST00000597423 KLHL29Q96CT2 875 aa14.46□□□□□ -0.09
TRIM28-209ENST00000597423 COQ8BQ96D53 544 aa14.46□□□□□ -0.09
TRIM28-209ENST00000597423 MVB12AQ96EY5 273 aa14.46□□□□□ -0.09
TRIM28-209ENST00000597423 ITCHQ96J02 903 aa14.46□□□□□ -0.09
TRIM28-209ENST00000597423 HOPXQ9BPY8 73 aaPredicted RBP14.46□□□□□ -0.09
TRIM28-209ENST00000597423 BHLHE41Q9C0J9 482 aaPredicted RBP14.46□□□□□ -0.09
TRIM28-209ENST00000597423 SLC7A5P2Q9GIP4 190 aa14.46□□□□□ -0.09
TRIM28-209ENST00000597423 AICDAQ9GZX7 198 aa14.46□□□□□ -0.09
TRIM28-209ENST00000597423 SPRTNQ9H040 489 aaPredicted RBP14.46□□□□□ -0.09
TRIM28-209ENST00000597423 SYNPO2LQ9H987 977 aa14.46□□□□□ -0.09
TRIM28-209ENST00000597423 FAM120CQ9NX05 1096 aaKnown RBP14.46□□□□□ -0.09
TRIM28-209ENST00000597423 RARRES3Q9UL19 164 aa14.46□□□□□ -0.09
TRIM28-209ENST00000597423 PCDHGB4Q9UN71 923 aa14.46□□□□□ -0.09
TRIM28-209ENST00000597423 CLCA2Q9UQC9 943 aa14.46□□□□□ -0.09
TRIM28-209ENST00000597423 NAALAD2Q9Y3Q0 740 aa14.46□□□□□ -0.09
TRIM28-209ENST00000597423 ASB4Q9Y574 426 aa14.46□□□□□ -0.09
TRIM28-209ENST00000597423 GOLGA4Q13439 2230 aaKnown RBP14.46□□□□□ -0.1
TRIM28-209ENST00000597423 GPR179Q6PRD1 2367 aa14.45□□□□□ -0.1
TRIM28-209ENST00000597423 C1orf226A1L170 272 aa14.45□□□□□ -0.1
TRIM28-209ENST00000597423 BLACEA4D250 179 aa14.45□□□□□ -0.1
TRIM28-209ENST00000597423 H0YIG0 161 aa14.45□□□□□ -0.1
TRIM28-209ENST00000597423 PROM1O43490 865 aa14.45□□□□□ -0.1
TRIM28-209ENST00000597423 HCRTR1O43613 425 aa14.45□□□□□ -0.1
TRIM28-209ENST00000597423 TMPRSS11DO60235 418 aa14.45□□□□□ -0.1
TRIM28-209ENST00000597423 KLHL18O94889 574 aa14.45□□□□□ -0.1
TRIM28-209ENST00000597423 NSA2O95478 260 aaKnown RBP14.45□□□□□ -0.1
TRIM28-209ENST00000597423 HBQ1P09105 142 aa14.45□□□□□ -0.1
TRIM28-209ENST00000597423 FURINP09958 794 aa14.45□□□□□ -0.1
TRIM28-209ENST00000597423 CPN2P22792 545 aa14.45□□□□□ -0.1
TRIM28-209ENST00000597423 CPA2P48052 419 aa14.45□□□□□ -0.1
TRIM28-209ENST00000597423 ALDH9A1P49189 494 aa14.45□□□□□ -0.1
TRIM28-209ENST00000597423 NUDT2P50583 147 aa14.45□□□□□ -0.1
TRIM28-209ENST00000597423 IL11RAQ14626 422 aa14.45□□□□□ -0.1
TRIM28-209ENST00000597423 TIGD2Q4W5G0 525 aa14.45□□□□□ -0.1
TRIM28-209ENST00000597423 SPANXN4Q5MJ08 99 aa14.45□□□□□ -0.1
TRIM28-209ENST00000597423 NDUFAF5Q5TEU4 345 aa14.45□□□□□ -0.1
TRIM28-209ENST00000597423 REP15Q6BDI9 236 aa14.45□□□□□ -0.1
TRIM28-209ENST00000597423 PRMT9Q6P2P2 845 aa14.45□□□□□ -0.1
TRIM28-209ENST00000597423 HACD2Q6Y1H2 254 aa14.45□□□□□ -0.1
TRIM28-209ENST00000597423 ZNF793Q6ZN11 406 aa14.45□□□□□ -0.1
TRIM28-209ENST00000597423 TMPRSS9Q7Z410 1059 aa14.45□□□□□ -0.1
TRIM28-209ENST00000597423 GLRX5Q86SX6 157 aa14.45□□□□□ -0.1
TRIM28-209ENST00000597423 PIP4P1Q86T03 277 aa14.45□□□□□ -0.1
TRIM28-209ENST00000597423 SAMD14Q8IZD0 417 aaPredicted RBP14.45□□□□□ -0.1
TRIM28-209ENST00000597423 ARHGAP24Q8N264 748 aa14.45□□□□□ -0.1
TRIM28-209ENST00000597423 ZNF501Q96CX3 271 aaPredicted RBP14.45□□□□□ -0.1
TRIM28-209ENST00000597423 RCN3Q96D15 328 aa14.45□□□□□ -0.1
TRIM28-209ENST00000597423 ZNF764Q96H86 408 aaPredicted RBP14.45□□□□□ -0.1
TRIM28-209ENST00000597423 DUSP26Q9BV47 211 aa14.45□□□□□ -0.1
TRIM28-209ENST00000597423 CUTCQ9NTM9 273 aa14.45□□□□□ -0.1
TRIM28-209ENST00000597423 GIMAP4Q9NUV9 329 aa14.45□□□□□ -0.1
TRIM28-209ENST00000597423 TAS2R7Q9NYW3 318 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms