RNA–Protein interactions for RNA: ENST00000597209.1

CHMP2A-203, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-203ENST00000597209 TGM3Q08188 693 aa16.78■□□□□ 0.28
CHMP2A-203ENST00000597209 CHIT1Q13231 466 aa16.78■□□□□ 0.28
CHMP2A-203ENST00000597209 EFTUD2Q15029 972 aaKnown RBP eCLIP16.78■□□□□ 0.281e-5■■■□□ 16.7
CHMP2A-203ENST00000597209 OR1C1Q15619 314 aa16.78■□□□□ 0.28
CHMP2A-203ENST00000597209 ZNF595Q8IYB9 648 aa16.78■□□□□ 0.28
CHMP2A-203ENST00000597209 CYP4X1Q8N118 509 aa16.78■□□□□ 0.28
CHMP2A-203ENST00000597209 MMGT1Q8N4V1 131 aa16.78■□□□□ 0.28
CHMP2A-203ENST00000597209 SRFBP1Q8NEF9 429 aaKnown RBP16.78■□□□□ 0.28
CHMP2A-203ENST00000597209 RELTQ969Z4 430 aa16.78■□□□□ 0.28
CHMP2A-203ENST00000597209 NXNL1Q96CM4 212 aa16.78■□□□□ 0.28
CHMP2A-203ENST00000597209 SIGLEC12Q96PQ1 595 aa16.78■□□□□ 0.28
CHMP2A-203ENST00000597209 FUT8Q9BYC5 575 aa16.78■□□□□ 0.28
CHMP2A-203ENST00000597209 ROGDIQ9GZN7 287 aa16.78■□□□□ 0.28
CHMP2A-203ENST00000597209 PRTFDC1Q9NRG1 225 aa16.78■□□□□ 0.28
CHMP2A-203ENST00000597209 MRPS33Q9Y291 106 aaKnown RBP16.78■□□□□ 0.28
CHMP2A-203ENST00000597209 ASB1Q9Y576 335 aa16.78■□□□□ 0.28
CHMP2A-203ENST00000597209 UTP20O75691 2785 aaKnown RBP16.78■□□□□ 0.28
CHMP2A-203ENST00000597209 A0A0G2JN53 185 aa16.77■□□□□ 0.28
CHMP2A-203ENST00000597209 HMX2A2RU54 273 aa16.77■□□□□ 0.28
CHMP2A-203ENST00000597209 ASPDHA6ND91 283 aa16.77■□□□□ 0.28
CHMP2A-203ENST00000597209 SYCE1LA8MT33 242 aa16.77■□□□□ 0.28
CHMP2A-203ENST00000597209 K7EPI3 171 aa16.77■□□□□ 0.28
CHMP2A-203ENST00000597209 URI1O94763 535 aaPredicted RBP16.77■□□□□ 0.28
CHMP2A-203ENST00000597209 CLDN1O95832 211 aa16.77■□□□□ 0.28
CHMP2A-203ENST00000597209 MST1P26927 711 aa16.77■□□□□ 0.28
CHMP2A-203ENST00000597209 SERPINB1P30740 379 aa16.77■□□□□ 0.28
CHMP2A-203ENST00000597209 PHBP35232 272 aa16.77■□□□□ 0.28
CHMP2A-203ENST00000597209 GMPRP36959 345 aa16.77■□□□□ 0.28
CHMP2A-203ENST00000597209 PLA2G16P53816 162 aa16.77■□□□□ 0.28
CHMP2A-203ENST00000597209 MLF1P58340 268 aa16.77■□□□□ 0.28
CHMP2A-203ENST00000597209 RCN2Q14257 317 aa16.77■□□□□ 0.28
CHMP2A-203ENST00000597209 FAM83EQ2M2I3 478 aa16.77■□□□□ 0.28
CHMP2A-203ENST00000597209 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.77■□□□□ 0.281e-7■■□□□ 13.1
CHMP2A-203ENST00000597209 ADNP2Q6IQ32 1131 aa16.77■□□□□ 0.28
CHMP2A-203ENST00000597209 LAS2Q8IYD9 372 aa16.77■□□□□ 0.28
CHMP2A-203ENST00000597209 CENPLQ8N0S6 344 aaPredicted RBP16.77■□□□□ 0.28
CHMP2A-203ENST00000597209 KIF2BQ8N4N8 673 aa16.77■□□□□ 0.28
CHMP2A-203ENST00000597209 TMEM178AQ8NBL3 297 aa16.77■□□□□ 0.28
CHMP2A-203ENST00000597209 B3GNT7Q8NFL0 401 aa16.77■□□□□ 0.28
CHMP2A-203ENST00000597209 EXT2Q93063 718 aa16.77■□□□□ 0.28
CHMP2A-203ENST00000597209 C16orf45Q96MC5 204 aaPredicted RBP16.77■□□□□ 0.28
CHMP2A-203ENST00000597209 TBCDQ9BTW9 1192 aa16.77■□□□□ 0.28
CHMP2A-203ENST00000597209 TSPYL1Q9H0U9 437 aa16.77■□□□□ 0.28
CHMP2A-203ENST00000597209 PRDM7Q9NQW5 492 aa16.77■□□□□ 0.28
CHMP2A-203ENST00000597209 OPTCQ9UBM4 332 aa16.77■□□□□ 0.28
CHMP2A-203ENST00000597209 DAPP1Q9UN19 280 aa16.77■□□□□ 0.28
CHMP2A-203ENST00000597209 CLDN16Q9Y5I7 305 aa16.77■□□□□ 0.28
CHMP2A-203ENST00000597209 NAV2Q8IVL1 2488 aa16.76■□□□□ 0.27
CHMP2A-203ENST00000597209 A1L4Q6 167 aa16.76■□□□□ 0.27
CHMP2A-203ENST00000597209 SUPT3HB4E1H0 165 aa16.76■□□□□ 0.27
CHMP2A-203ENST00000597209 UBXN8O00124 270 aa16.76■□□□□ 0.27
CHMP2A-203ENST00000597209 CYR61O00622 381 aa16.76■□□□□ 0.27
CHMP2A-203ENST00000597209 SUPT3HO75486 399 aa16.76■□□□□ 0.27
CHMP2A-203ENST00000597209 NEURL1O76050 574 aa16.76■□□□□ 0.27
CHMP2A-203ENST00000597209 C2P06681 752 aa16.76■□□□□ 0.27
CHMP2A-203ENST00000597209 MTHFD2P13995 350 aa16.76■□□□□ 0.27
CHMP2A-203ENST00000597209 TPP2P29144 1249 aaPredicted RBP16.76■□□□□ 0.27
CHMP2A-203ENST00000597209 TRHRP34981 398 aaPredicted RBP16.76■□□□□ 0.27
CHMP2A-203ENST00000597209 CLCN2P51788 898 aa16.76■□□□□ 0.27
CHMP2A-203ENST00000597209 LIM2P55344 173 aa16.76■□□□□ 0.27
CHMP2A-203ENST00000597209 ACAP2Q15057 778 aa16.76■□□□□ 0.27
CHMP2A-203ENST00000597209 TMEM35AQ53FP2 167 aa16.76■□□□□ 0.27
CHMP2A-203ENST00000597209 MROH9Q5TGP6 573 aa16.76■□□□□ 0.27
CHMP2A-203ENST00000597209 SPINK14Q6IE38 97 aa16.76■□□□□ 0.27
CHMP2A-203ENST00000597209 SLC25A25Q6KCM7 469 aa16.76■□□□□ 0.27
CHMP2A-203ENST00000597209 GFRALQ6UXV0 394 aa16.76■□□□□ 0.27
CHMP2A-203ENST00000597209 APCDD1LQ8NCL9 501 aa16.76■□□□□ 0.27
CHMP2A-203ENST00000597209 ZNF473Q8WTR7 871 aaKnown RBP16.76■□□□□ 0.27
CHMP2A-203ENST00000597209 KCNC2Q96PR1 638 aa16.76■□□□□ 0.27
CHMP2A-203ENST00000597209 F2RL3Q96RI0 385 aa16.76■□□□□ 0.27
CHMP2A-203ENST00000597209 MS4A8Q9BY19 250 aa16.76■□□□□ 0.27
CHMP2A-203ENST00000597209 DEFB126Q9BYW3 111 aa16.76■□□□□ 0.27
CHMP2A-203ENST00000597209 ACSS3Q9H6R3 686 aa16.76■□□□□ 0.27
CHMP2A-203ENST00000597209 COPS7BQ9H9Q2 264 aaPredicted RBP16.76■□□□□ 0.27
CHMP2A-203ENST00000597209 LYRM4Q9HD34 91 aa16.76■□□□□ 0.27
CHMP2A-203ENST00000597209 SNX15Q9NRS6 342 aa16.76■□□□□ 0.27
CHMP2A-203ENST00000597209 ANKRD10Q9NXR5 420 aa16.76■□□□□ 0.27
CHMP2A-203ENST00000597209 NINJ2Q9NZG7 142 aa16.76■□□□□ 0.27
CHMP2A-203ENST00000597209 LRFN1Q9P244 771 aa16.76■□□□□ 0.27
CHMP2A-203ENST00000597209 SEC14L3Q9UDX4 400 aa16.76■□□□□ 0.27
CHMP2A-203ENST00000597209 MTRF1LQ9UGC7 380 aaKnown RBP16.76■□□□□ 0.27
CHMP2A-203ENST00000597209 ADGRE2Q9UHX3 823 aa16.76■□□□□ 0.27
CHMP2A-203ENST00000597209 ZGRF1Q86YA3 2104 aa16.76■□□□□ 0.27
CHMP2A-203ENST00000597209 A8MUA0 341 aa16.75■□□□□ 0.27
CHMP2A-203ENST00000597209 KLK8O60259 260 aa16.75■□□□□ 0.27
CHMP2A-203ENST00000597209 CTNSO60931 367 aa16.75■□□□□ 0.27
CHMP2A-203ENST00000597209 KLHL2O95198 593 aa16.75■□□□□ 0.27
CHMP2A-203ENST00000597209 MLYCDO95822 493 aa16.75■□□□□ 0.27
CHMP2A-203ENST00000597209 SP1P08047 785 aa16.75■□□□□ 0.27
CHMP2A-203ENST00000597209 EPB42P16452 691 aa16.75■□□□□ 0.27
CHMP2A-203ENST00000597209 CERS1P27544 350 aa16.75■□□□□ 0.27
CHMP2A-203ENST00000597209 EEF1DP29692 281 aaKnown RBP16.75■□□□□ 0.27
CHMP2A-203ENST00000597209 MSH2P43246 934 aa16.75■□□□□ 0.27
CHMP2A-203ENST00000597209 GPR143P51810 404 aa16.75■□□□□ 0.27
CHMP2A-203ENST00000597209 HNRNPFP52597 415 aaKnown RBP16.75■□□□□ 0.27
CHMP2A-203ENST00000597209 KCNK10P57789 538 aa16.75■□□□□ 0.27
CHMP2A-203ENST00000597209 OC90Q02509 493 aaPredicted RBP16.75■□□□□ 0.27
CHMP2A-203ENST00000597209 NAA30Q147X3 362 aaPredicted RBP16.75■□□□□ 0.27
CHMP2A-203ENST00000597209 HIST2H2BCQ6DN03 193 aa16.75■□□□□ 0.27
CHMP2A-203ENST00000597209 MED27Q6P2C8 311 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms