RNA–Protein interactions for RNA: ENST00000596726.3

PNKP-209, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 637 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-209ENST00000596726 ISLR2Q6UXK2 745 aa19.81■□□□□ 0.76
PNKP-209ENST00000596726 ZNF793Q6ZN11 406 aa19.81■□□□□ 0.76
PNKP-209ENST00000596726 Q6ZS92 163 aa19.81■□□□□ 0.76
PNKP-209ENST00000596726 CHSY3Q70JA7 882 aa19.81■□□□□ 0.76
PNKP-209ENST00000596726 RNF175Q8N4F7 328 aa19.81■□□□□ 0.76
PNKP-209ENST00000596726 ZADH2Q8N4Q0 377 aa19.81■□□□□ 0.76
PNKP-209ENST00000596726 OR52B6Q8NGF0 335 aa19.81■□□□□ 0.76
PNKP-209ENST00000596726 BRIX1Q8TDN6 353 aaKnown RBP19.81■□□□□ 0.76
PNKP-209ENST00000596726 PTCHD1Q96NR3 888 aa19.81■□□□□ 0.76
PNKP-209ENST00000596726 TBCDQ9BTW9 1192 aa19.81■□□□□ 0.76
PNKP-209ENST00000596726 ROGDIQ9GZN7 287 aa19.81■□□□□ 0.76
PNKP-209ENST00000596726 DMRT3Q9NQL9 472 aa19.81■□□□□ 0.76
PNKP-209ENST00000596726 PRDM9Q9NQV7 894 aa19.81■□□□□ 0.76
PNKP-209ENST00000596726 PSD3Q9NYI0 1048 aa19.81■□□□□ 0.76
PNKP-209ENST00000596726 DAPP1Q9UN19 280 aa19.81■□□□□ 0.76
PNKP-209ENST00000596726 B3GNT3Q9Y2A9 372 aa19.81■□□□□ 0.76
PNKP-209ENST00000596726 MMACHCQ9Y4U1 282 aa19.81■□□□□ 0.76
PNKP-209ENST00000596726 NBASA2RRP1 2371 aa19.8■□□□□ 0.76
PNKP-209ENST00000596726 TCRBV16S1A1N1A0A5B0 115 aa19.8■□□□□ 0.76
PNKP-209ENST00000596726 CLDN9O95484 217 aa19.8■□□□□ 0.76
PNKP-209ENST00000596726 ATP5A1P25705 553 aaKnown RBP19.8■□□□□ 0.76
PNKP-209ENST00000596726 CERS1P27544 350 aa19.8■□□□□ 0.76
PNKP-209ENST00000596726 LIM2P55344 173 aa19.8■□□□□ 0.76
PNKP-209ENST00000596726 OR4D2P58180 307 aa19.8■□□□□ 0.76
PNKP-209ENST00000596726 TRAF3Q13114 568 aa19.8■□□□□ 0.76
PNKP-209ENST00000596726 CPSF6Q16630 551 aaKnown RBP eCLIP19.8■□□□□ 0.76
PNKP-209ENST00000596726 KHDRBS2Q5VWX1 349 aaKnown RBP19.8■□□□□ 0.76
PNKP-209ENST00000596726 WDR93Q6P2C0 686 aa19.8■□□□□ 0.76
PNKP-209ENST00000596726 PAPD4Q6PIY7 484 aaKnown RBP19.8■□□□□ 0.76
PNKP-209ENST00000596726 MYLK4Q86YV6 388 aaPredicted RBP19.8■□□□□ 0.76
PNKP-209ENST00000596726 CYP4X1Q8N118 509 aa19.8■□□□□ 0.76
PNKP-209ENST00000596726 WDR20Q8TBZ3 569 aa19.8■□□□□ 0.76
PNKP-209ENST00000596726 ADAMTS18Q8TE60 1221 aa19.8■□□□□ 0.76
PNKP-209ENST00000596726 PPP4R1Q8TF05 950 aa19.8■□□□□ 0.76
PNKP-209ENST00000596726 ZNF483Q8TF39 744 aaPredicted RBP19.8■□□□□ 0.76
PNKP-209ENST00000596726 REPS1Q96D71 796 aa19.8■□□□□ 0.76
PNKP-209ENST00000596726 OR51B5Q9H339 312 aa19.8■□□□□ 0.76
PNKP-209ENST00000596726 COPS7BQ9H9Q2 264 aaPredicted RBP19.8■□□□□ 0.76
PNKP-209ENST00000596726 NECTIN3Q9NQS3 549 aa19.8■□□□□ 0.76
PNKP-209ENST00000596726 KCMF1Q9P0J7 381 aa19.8■□□□□ 0.76
PNKP-209ENST00000596726 SHANK1Q9Y566 2161 aa19.79■□□□□ 0.76
PNKP-209ENST00000596726 RTCAO00442 366 aaKnown RBP19.79■□□□□ 0.76
PNKP-209ENST00000596726 CYR61O00622 381 aa19.79■□□□□ 0.76
PNKP-209ENST00000596726 WISP1O95388 367 aa19.79■□□□□ 0.76
PNKP-209ENST00000596726 TAC1P20366 129 aa19.79■□□□□ 0.76
PNKP-209ENST00000596726 MAOAP21397 527 aa19.79■□□□□ 0.76
PNKP-209ENST00000596726 SLCO1A2P46721 670 aa19.79■□□□□ 0.76
PNKP-209ENST00000596726 CCNG1P51959 295 aa19.79■□□□□ 0.76
PNKP-209ENST00000596726 MLLT10P55197 1068 aa19.79■□□□□ 0.76
PNKP-209ENST00000596726 FOXK1P85037 733 aa19.79■□□□□ 0.76
PNKP-209ENST00000596726 ACTN3Q08043 901 aaPredicted RBP19.79■□□□□ 0.76
PNKP-209ENST00000596726 DDX39BQ13838 428 aaKnown RBP19.79■□□□□ 0.76
PNKP-209ENST00000596726 ZRSR2Q15696 482 aaKnown RBP19.79■□□□□ 0.76
PNKP-209ENST00000596726 EXT1Q16394 746 aa19.79■□□□□ 0.76
PNKP-209ENST00000596726 BTBD16Q32M84 506 aa19.79■□□□□ 0.76
PNKP-209ENST00000596726 H3F3CQ6NXT2 135 aa19.79■□□□□ 0.76
PNKP-209ENST00000596726 RPS27LQ71UM5 84 aaKnown RBP19.79■□□□□ 0.76
PNKP-209ENST00000596726 SCUBE1Q8IWY4 988 aa19.79■□□□□ 0.76
PNKP-209ENST00000596726 SIRT6Q8N6T7 355 aa19.79■□□□□ 0.76
PNKP-209ENST00000596726 TMEM52Q8NDY8 209 aa19.79■□□□□ 0.76
PNKP-209ENST00000596726 M1APQ8TC57 530 aa19.79■□□□□ 0.76
PNKP-209ENST00000596726 CDK15Q96Q40 435 aa19.79■□□□□ 0.76
PNKP-209ENST00000596726 MTERF1Q99551 399 aaKnown RBP19.79■□□□□ 0.76
PNKP-209ENST00000596726 LPAR4Q99677 370 aa19.79■□□□□ 0.76
PNKP-209ENST00000596726 EPS8L2Q9H6S3 715 aa19.79■□□□□ 0.76
PNKP-209ENST00000596726 LYRM4Q9HD34 91 aa19.79■□□□□ 0.76
PNKP-209ENST00000596726 PTGFRNQ9P2B2 879 aa19.79■□□□□ 0.76
PNKP-209ENST00000596726 DCDC2Q9UHG0 476 aa19.79■□□□□ 0.76
PNKP-209ENST00000596726 PPT2Q9UMR5 302 aa19.79■□□□□ 0.76
PNKP-209ENST00000596726 CLDN16Q9Y5I7 305 aa19.79■□□□□ 0.76
PNKP-209ENST00000596726 CSAG2Q9Y5P2 127 aa19.79■□□□□ 0.76
PNKP-209ENST00000596726 TTLL8A6PVC2 850 aa19.78■□□□□ 0.76
PNKP-209ENST00000596726 FOXO6A8MYZ6 492 aa19.78■□□□□ 0.76
PNKP-209ENST00000596726 FOXE1O00358 373 aaPredicted RBP19.78■□□□□ 0.76
PNKP-209ENST00000596726 DLX3O60479 287 aa19.78■□□□□ 0.76
PNKP-209ENST00000596726 SH3BGRLO75368 114 aa19.78■□□□□ 0.76
PNKP-209ENST00000596726 HIST1H1TP22492 207 aaPredicted RBP19.78■□□□□ 0.76
PNKP-209ENST00000596726 PTX3P26022 381 aaPredicted RBP19.78■□□□□ 0.76
PNKP-209ENST00000596726 TSFMP43897 325 aaKnown RBP19.78■□□□□ 0.76
PNKP-209ENST00000596726 HNRNPFP52597 415 aaKnown RBP19.78■□□□□ 0.76
PNKP-209ENST00000596726 ARFIP1P53367 373 aa19.78■□□□□ 0.76
PNKP-209ENST00000596726 HSD17B7P56937 341 aa19.78■□□□□ 0.76
PNKP-209ENST00000596726 RPS13P62277 151 aaKnown RBP19.78■□□□□ 0.76
PNKP-209ENST00000596726 GGTA1PQ4G0N0 100 aa19.78■□□□□ 0.76
PNKP-209ENST00000596726 LINC00696Q6ZRV3 163 aa19.78■□□□□ 0.76
PNKP-209ENST00000596726 ACOT4Q8N9L9 421 aa19.78■□□□□ 0.76
PNKP-209ENST00000596726 EPS8L3Q8TE67 593 aaKnown RBP19.78■□□□□ 0.76
PNKP-209ENST00000596726 AENQ8WTP8 325 aaKnown RBP19.78■□□□□ 0.76
PNKP-209ENST00000596726 ATP6V1E2Q96A05 226 aa19.78■□□□□ 0.76
PNKP-209ENST00000596726 MIB2Q96AX9 1013 aa19.78■□□□□ 0.76
PNKP-209ENST00000596726 RGMAQ96B86 450 aa19.78■□□□□ 0.76
PNKP-209ENST00000596726 CSF3RQ99062 836 aa19.78■□□□□ 0.76
PNKP-209ENST00000596726 MMP25Q9NPA2 562 aa19.78■□□□□ 0.76
PNKP-209ENST00000596726 SEMA4BQ9NPR2 832 aaPredicted RBP19.78■□□□□ 0.76
PNKP-209ENST00000596726 SLAMF7Q9NQ25 335 aa19.78■□□□□ 0.76
PNKP-209ENST00000596726 LUZP4Q9P127 313 aa19.78■□□□□ 0.76
PNKP-209ENST00000596726 UBR5O95071 2799 aaPredicted RBP19.77■□□□□ 0.76
PNKP-209ENST00000596726 SAP18O00422 153 aaKnown RBP19.77■□□□□ 0.76
PNKP-209ENST00000596726 CDH16O75309 829 aa19.77■□□□□ 0.76
PNKP-209ENST00000596726 ATP5F1P24539 256 aaPredicted RBP19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms