RNA–Protein interactions for RNA: ENST00000596457.1

LIG1-211, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 792 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-211ENST00000596457 A8MUA0 341 aa10.45□□□□□ -0.74
LIG1-211ENST00000596457 H0YIV9 168 aa10.45□□□□□ -0.74
LIG1-211ENST00000596457 UQCRHP07919 91 aa10.45□□□□□ -0.74
LIG1-211ENST00000596457 FHP07954 510 aa10.45□□□□□ -0.74
LIG1-211ENST00000596457 C8orf89P0DMQ9 161 aa10.45□□□□□ -0.74
LIG1-211ENST00000596457 ITGA3P26006 1051 aa10.45□□□□□ -0.74
LIG1-211ENST00000596457 PTX3P26022 381 aaPredicted RBP10.45□□□□□ -0.74
LIG1-211ENST00000596457 HMOX2P30519 316 aa10.45□□□□□ -0.74
LIG1-211ENST00000596457 SERPINB1P30740 379 aa10.45□□□□□ -0.74
LIG1-211ENST00000596457 PIK3CBP42338 1070 aa10.45□□□□□ -0.74
LIG1-211ENST00000596457 NAGLUP54802 743 aa10.45□□□□□ -0.74
LIG1-211ENST00000596457 MTTPP55157 894 aa10.45□□□□□ -0.74
LIG1-211ENST00000596457 BTG2P78543 158 aa10.45□□□□□ -0.74
LIG1-211ENST00000596457 ACTN3Q08043 901 aaPredicted RBP10.45□□□□□ -0.74
LIG1-211ENST00000596457 NFATC3Q12968 1075 aa10.45□□□□□ -0.74
LIG1-211ENST00000596457 ADPRMQ3LIE5 342 aa10.45□□□□□ -0.74
LIG1-211ENST00000596457 COLEC12Q5KU26 742 aa10.45□□□□□ -0.74
LIG1-211ENST00000596457 DCAF10Q5QP82 559 aa10.45□□□□□ -0.74
LIG1-211ENST00000596457 DEPDC1Q5TB30 811 aa10.45□□□□□ -0.74
LIG1-211ENST00000596457 KHDRBS2Q5VWX1 349 aaKnown RBP10.45□□□□□ -0.74
LIG1-211ENST00000596457 OR4C11Q6IEV9 310 aa10.45□□□□□ -0.74
LIG1-211ENST00000596457 LETMD1Q6P1Q0 360 aa10.45□□□□□ -0.74
LIG1-211ENST00000596457 LANCL3Q6ZV70 420 aa10.45□□□□□ -0.74
LIG1-211ENST00000596457 GPRIN3Q6ZVF9 776 aa10.45□□□□□ -0.74
LIG1-211ENST00000596457 UBE3DQ7Z6J8 389 aa10.45□□□□□ -0.74
LIG1-211ENST00000596457 PTRH1Q86Y79 214 aaKnown RBP10.45□□□□□ -0.74
LIG1-211ENST00000596457 APLFQ8IW19 511 aaPredicted RBP10.45□□□□□ -0.74
LIG1-211ENST00000596457 AMER2Q8N7J2 671 aa10.45□□□□□ -0.74
LIG1-211ENST00000596457 CDYL2Q8N8U2 506 aa10.45□□□□□ -0.74
LIG1-211ENST00000596457 FAM47BQ8NA70 645 aa10.45□□□□□ -0.74
LIG1-211ENST00000596457 SRFBP1Q8NEF9 429 aaKnown RBP10.45□□□□□ -0.74
LIG1-211ENST00000596457 OR11G2Q8NGC1 345 aa10.45□□□□□ -0.74
LIG1-211ENST00000596457 C9orf43Q8TAL5 461 aaPredicted RBP10.45□□□□□ -0.74
LIG1-211ENST00000596457 WDR20Q8TBZ3 569 aa10.45□□□□□ -0.74
LIG1-211ENST00000596457 RDH11Q8TC12 318 aa10.45□□□□□ -0.74
LIG1-211ENST00000596457 TCP10LQ8TDR4 215 aa10.45□□□□□ -0.74
LIG1-211ENST00000596457 SELENOMQ8WWX9 145 aa10.45□□□□□ -0.74
LIG1-211ENST00000596457 TSLPQ969D9 159 aa10.45□□□□□ -0.74
LIG1-211ENST00000596457 RGMAQ96B86 450 aa10.45□□□□□ -0.74
LIG1-211ENST00000596457 L3HYPDHQ96EM0 354 aa10.45□□□□□ -0.74
LIG1-211ENST00000596457 PTCHD1Q96NR3 888 aa10.45□□□□□ -0.74
LIG1-211ENST00000596457 QRFPRQ96P65 431 aa10.45□□□□□ -0.74
LIG1-211ENST00000596457 KCNC2Q96PR1 638 aa10.45□□□□□ -0.74
LIG1-211ENST00000596457 SERINC2Q96SA4 455 aa10.45□□□□□ -0.74
LIG1-211ENST00000596457 TBCDQ9BTW9 1192 aa10.45□□□□□ -0.74
LIG1-211ENST00000596457 SLC25A23Q9BV35 468 aa10.45□□□□□ -0.74
LIG1-211ENST00000596457 C1QTNF3Q9BXJ4 246 aa10.45□□□□□ -0.74
LIG1-211ENST00000596457 ELOVL6Q9H5J4 265 aa10.45□□□□□ -0.74
LIG1-211ENST00000596457 ZNF160Q9HCG1 818 aa10.45□□□□□ -0.74
LIG1-211ENST00000596457 MID1IP1Q9NPA3 183 aa10.45□□□□□ -0.74
LIG1-211ENST00000596457 ATP13A2Q9NQ11 1180 aa10.45□□□□□ -0.74
LIG1-211ENST00000596457 PRDM7Q9NQW5 492 aa10.45□□□□□ -0.74
LIG1-211ENST00000596457 FARSBQ9NSD9 589 aaKnown RBP10.45□□□□□ -0.74
LIG1-211ENST00000596457 MID2Q9UJV3 735 aa10.45□□□□□ -0.74
LIG1-211ENST00000596457 G3BP2Q9UN86 482 aaKnown RBP10.45□□□□□ -0.74
LIG1-211ENST00000596457 PLLPQ9Y342 182 aa10.45□□□□□ -0.74
LIG1-211ENST00000596457 HEMK1Q9Y5R4 338 aaPredicted RBP10.45□□□□□ -0.74
LIG1-211ENST00000596457 SEC16AO15027 2179 aa10.44□□□□□ -0.74
LIG1-211ENST00000596457 NSG1A0A0A6YYJ2 146 aa10.44□□□□□ -0.74
LIG1-211ENST00000596457 CCDC151A5D8V7 595 aa10.44□□□□□ -0.74
LIG1-211ENST00000596457 K7EM74 188 aa10.44□□□□□ -0.74
LIG1-211ENST00000596457 CTIFO43310 598 aaKnown RBP10.44□□□□□ -0.74
LIG1-211ENST00000596457 PRMT3O60678 531 aa10.44□□□□□ -0.74
LIG1-211ENST00000596457 CRCPO75575 148 aa10.44□□□□□ -0.74
LIG1-211ENST00000596457 PDYNP01213 254 aa10.44□□□□□ -0.74
LIG1-211ENST00000596457 MYZAPP0CAP1 466 aa10.44□□□□□ -0.74
LIG1-211ENST00000596457 IL10P22301 178 aa10.44□□□□□ -0.74
LIG1-211ENST00000596457 JAK1P23458 1154 aa10.44□□□□□ -0.74
LIG1-211ENST00000596457 ATP5A1P25705 553 aaKnown RBP10.44□□□□□ -0.74
LIG1-211ENST00000596457 ALDH3A1P30838 453 aa10.44□□□□□ -0.74
LIG1-211ENST00000596457 EFNA3P52797 238 aa10.44□□□□□ -0.74
LIG1-211ENST00000596457 RAB38P57729 211 aa10.44□□□□□ -0.74
LIG1-211ENST00000596457 OR4D2P58180 307 aa10.44□□□□□ -0.74
LIG1-211ENST00000596457 KCNC4Q03721 635 aa10.44□□□□□ -0.74
LIG1-211ENST00000596457 SLAMF1Q13291 335 aa10.44□□□□□ -0.74
LIG1-211ENST00000596457 ABRAXAS2Q15018 415 aa10.44□□□□□ -0.74
LIG1-211ENST00000596457 NSDHLQ15738 373 aa10.44□□□□□ -0.74
LIG1-211ENST00000596457 TMEM35AQ53FP2 167 aa10.44□□□□□ -0.74
LIG1-211ENST00000596457 TCHHL1Q5QJ38 904 aaPredicted RBP10.44□□□□□ -0.74
LIG1-211ENST00000596457 BEND6Q5SZJ8 279 aaPredicted RBP10.44□□□□□ -0.74
LIG1-211ENST00000596457 IRAK1BP1Q5VVH5 260 aa10.44□□□□□ -0.74
LIG1-211ENST00000596457 FRG2Q64ET8 278 aa10.44□□□□□ -0.74
LIG1-211ENST00000596457 SCIMPQ6UWF3 145 aa10.44□□□□□ -0.74
LIG1-211ENST00000596457 ZNF793Q6ZN11 406 aa10.44□□□□□ -0.74
LIG1-211ENST00000596457 CPEB2Q7Z5Q1 589 aaKnown RBP10.44□□□□□ -0.74
LIG1-211ENST00000596457 ANKRD37Q7Z713 158 aa10.44□□□□□ -0.74
LIG1-211ENST00000596457 CLNKQ7Z7G1 428 aa10.44□□□□□ -0.74
LIG1-211ENST00000596457 C10orf107Q8IVU9 208 aa10.44□□□□□ -0.74
LIG1-211ENST00000596457 IQCKQ8N0W5 287 aa10.44□□□□□ -0.74
LIG1-211ENST00000596457 GALNT16Q8N428 558 aa10.44□□□□□ -0.74
LIG1-211ENST00000596457 EFCAB3Q8N7B9 438 aa10.44□□□□□ -0.74
LIG1-211ENST00000596457 ACOT4Q8N9L9 421 aa10.44□□□□□ -0.74
LIG1-211ENST00000596457 FDCSPQ8NFU4 85 aa10.44□□□□□ -0.74
LIG1-211ENST00000596457 METTL6Q8TCB7 284 aa10.44□□□□□ -0.74
LIG1-211ENST00000596457 THOC3Q96J01 351 aaKnown RBP10.44□□□□□ -0.74
LIG1-211ENST00000596457 FRG2BQ96QU4 278 aa10.44□□□□□ -0.74
LIG1-211ENST00000596457 OR1F2PQ96R84 312 aa10.44□□□□□ -0.74
LIG1-211ENST00000596457 HBEGFQ99075 208 aa10.44□□□□□ -0.74
LIG1-211ENST00000596457 MAPKAP1Q9BPZ7 522 aa10.44□□□□□ -0.74
LIG1-211ENST00000596457 MECRQ9BV79 373 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms