RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 PAOXQ6QHF9 649 aa9.26□□□□□ -0.93
LIG1-209ENST00000596104 NXPE4Q6UWF7 544 aa9.26□□□□□ -0.93
LIG1-209ENST00000596104 SBSNQ6UWP8 590 aa9.26□□□□□ -0.93
LIG1-209ENST00000596104 RGS9BPQ6ZS82 235 aa9.26□□□□□ -0.93
LIG1-209ENST00000596104 TMPRSS11BQ86T26 416 aa9.26□□□□□ -0.93
LIG1-209ENST00000596104 LIX1LQ8IVB5 337 aa9.26□□□□□ -0.93
LIG1-209ENST00000596104 CNTN4Q8IWV2 1026 aa9.26□□□□□ -0.93
LIG1-209ENST00000596104 CLYBLQ8N0X4 340 aa9.26□□□□□ -0.93
LIG1-209ENST00000596104 TMEM52Q8NDY8 209 aa9.26□□□□□ -0.93
LIG1-209ENST00000596104 OR5M9Q8NGP3 310 aa9.26□□□□□ -0.93
LIG1-209ENST00000596104 OR5M3Q8NGP4 307 aa9.26□□□□□ -0.93
LIG1-209ENST00000596104 ATL1Q8WXF7 558 aa9.26□□□□□ -0.93
LIG1-209ENST00000596104 NINJ1Q92982 152 aa9.26□□□□□ -0.93
LIG1-209ENST00000596104 TTYH2Q9BSA4 534 aa9.26□□□□□ -0.93
LIG1-209ENST00000596104 TTTY12Q9BZ98 90 aa9.26□□□□□ -0.93
LIG1-209ENST00000596104 LIN28AQ9H9Z2 209 aaKnown RBP9.26□□□□□ -0.93
LIG1-209ENST00000596104 PELI2Q9HAT8 420 aa9.26□□□□□ -0.93
LIG1-209ENST00000596104 PNO1Q9NRX1 252 aaKnown RBP9.26□□□□□ -0.93
LIG1-209ENST00000596104 CCM2LQ9NUG4 571 aaPredicted RBP9.26□□□□□ -0.93
LIG1-209ENST00000596104 ZNF358Q9NW07 568 aa9.26□□□□□ -0.93
LIG1-209ENST00000596104 HPF1Q9NWY4 346 aa9.26□□□□□ -0.93
LIG1-209ENST00000596104 ERVK-11Q9UQG0 969 aa9.26□□□□□ -0.93
LIG1-209ENST00000596104 LIPGQ9Y5X9 500 aa9.26□□□□□ -0.93
LIG1-209ENST00000596104 PRRC2AP48634 2157 aaKnown RBP9.26□□□□□ -0.93
LIG1-209ENST00000596104 INTS1Q8N201 2190 aaKnown RBP9.26□□□□□ -0.93
LIG1-209ENST00000596104 ANKHD1Q8IWZ3 2542 aaKnown RBP9.26□□□□□ -0.93
LIG1-209ENST00000596104 A0A1B0GVC2 190 aa9.25□□□□□ -0.93
LIG1-209ENST00000596104 FIGNL2A6NMB9 653 aa9.25□□□□□ -0.93
LIG1-209ENST00000596104 ACOT7O00154 380 aa9.25□□□□□ -0.93
LIG1-209ENST00000596104 BCKDKO14874 412 aa9.25□□□□□ -0.93
LIG1-209ENST00000596104 OR2J2O76002 312 aa9.25□□□□□ -0.93
LIG1-209ENST00000596104 GUCA1CO95843 209 aa9.25□□□□□ -0.93
LIG1-209ENST00000596104 ENO2P09104 434 aaPredicted RBP9.25□□□□□ -0.93
LIG1-209ENST00000596104 CCDC175P0C221 793 aa9.25□□□□□ -0.93
LIG1-209ENST00000596104 PGAM1P18669 254 aa9.25□□□□□ -0.93
LIG1-209ENST00000596104 KLK2P20151 261 aa9.25□□□□□ -0.93
LIG1-209ENST00000596104 ADH7P40394 386 aa9.25□□□□□ -0.93
LIG1-209ENST00000596104 SOX3P41225 446 aa9.25□□□□□ -0.93
LIG1-209ENST00000596104 HSD17B7P56937 341 aa9.25□□□□□ -0.93
LIG1-209ENST00000596104 BTN3A2P78410 334 aa9.25□□□□□ -0.93
LIG1-209ENST00000596104 PLGLB1Q02325 96 aa9.25□□□□□ -0.93
LIG1-209ENST00000596104 FOXO1Q12778 655 aa9.25□□□□□ -0.93
LIG1-209ENST00000596104 PPP1R3AQ16821 1122 aa9.25□□□□□ -0.93
LIG1-209ENST00000596104 BBS9Q3SYG4 887 aa9.25□□□□□ -0.93
LIG1-209ENST00000596104 HECTD2Q5U5R9 776 aa9.25□□□□□ -0.93
LIG1-209ENST00000596104 IL20RBQ6UXL0 311 aa9.25□□□□□ -0.93
LIG1-209ENST00000596104 B3GNT6Q6ZMB0 384 aa9.25□□□□□ -0.93
LIG1-209ENST00000596104 ZNF662Q6ZS27 426 aa9.25□□□□□ -0.93
LIG1-209ENST00000596104 TRILQ7L0X0 811 aa9.25□□□□□ -0.93
LIG1-209ENST00000596104 GALNT7Q86SF2 657 aa9.25□□□□□ -0.93
LIG1-209ENST00000596104 SLC22A16Q86VW1 577 aa9.25□□□□□ -0.93
LIG1-209ENST00000596104 THOC6Q86W42 341 aaKnown RBP9.25□□□□□ -0.93
LIG1-209ENST00000596104 TMEM251Q8N6I4 163 aa9.25□□□□□ -0.93
LIG1-209ENST00000596104 ASB15Q8WXK1 588 aa9.25□□□□□ -0.93
LIG1-209ENST00000596104 GAL3ST3Q96A11 431 aa9.25□□□□□ -0.93
LIG1-209ENST00000596104 MAGOHBQ96A72 148 aaKnown RBP9.25□□□□□ -0.93
LIG1-209ENST00000596104 RASL10BQ96S79 203 aa9.25□□□□□ -0.93
LIG1-209ENST00000596104 SMC6Q96SB8 1091 aa9.25□□□□□ -0.93
LIG1-209ENST00000596104 AIF1LQ9BQI0 150 aa9.25□□□□□ -0.93
LIG1-209ENST00000596104 CCDC77Q9BR77 488 aa9.25□□□□□ -0.93
LIG1-209ENST00000596104 NPLQ9BXD5 320 aaPredicted RBP9.25□□□□□ -0.93
LIG1-209ENST00000596104 TRIM54Q9BYV2 358 aa9.25□□□□□ -0.93
LIG1-209ENST00000596104 LIME1Q9H400 295 aa9.25□□□□□ -0.93
LIG1-209ENST00000596104 PLAC1Q9HBJ0 212 aa9.25□□□□□ -0.93
LIG1-209ENST00000596104 ADAP2Q9NPF8 381 aa9.25□□□□□ -0.93
LIG1-209ENST00000596104 DLL4Q9NR61 685 aa9.25□□□□□ -0.93
LIG1-209ENST00000596104 PRTFDC1Q9NRG1 225 aa9.25□□□□□ -0.93
LIG1-209ENST00000596104 DNAJB12Q9NXW2 375 aaKnown RBP9.25□□□□□ -0.93
LIG1-209ENST00000596104 SLC17A6Q9P2U8 582 aa9.25□□□□□ -0.93
LIG1-209ENST00000596104 MYOTQ9UBF9 498 aa9.25□□□□□ -0.93
LIG1-209ENST00000596104 SLC22A14Q9Y267 594 aa9.25□□□□□ -0.93
LIG1-209ENST00000596104 DYRK1BQ9Y463 629 aa9.25□□□□□ -0.93
LIG1-209ENST00000596104 ACANP16112 2415 aa9.25□□□□□ -0.93
LIG1-209ENST00000596104 NIPBLQ6KC79 2804 aaeCLIP9.25□□□□□ -0.93
LIG1-209ENST00000596104 A0A0G2JN53 185 aa9.24□□□□□ -0.93
LIG1-209ENST00000596104 A0A0G2JNJ9 132 aa9.24□□□□□ -0.93
LIG1-209ENST00000596104 PABPN1LA6NDY0 278 aaKnown RBP9.24□□□□□ -0.93
LIG1-209ENST00000596104 G3V3Y1 287 aa9.24□□□□□ -0.93
LIG1-209ENST00000596104 AQP7O14520 342 aa9.24□□□□□ -0.93
LIG1-209ENST00000596104 ZNF354AO60765 605 aaPredicted RBP9.24□□□□□ -0.93
LIG1-209ENST00000596104 TBX6O95947 436 aaPredicted RBP9.24□□□□□ -0.93
LIG1-209ENST00000596104 CNR1P21554 472 aa9.24□□□□□ -0.93
LIG1-209ENST00000596104 CDC25BP30305 580 aa9.24□□□□□ -0.93
LIG1-209ENST00000596104 HNRNPH1P31943 449 aaKnown RBP9.24□□□□□ -0.93
LIG1-209ENST00000596104 MAGEA5P43359 124 aa9.24□□□□□ -0.93
LIG1-209ENST00000596104 ZFP36L2P47974 494 aaKnown RBP9.24□□□□□ -0.93
LIG1-209ENST00000596104 HK2P52789 917 aa9.24□□□□□ -0.93
LIG1-209ENST00000596104 RAB38P57729 211 aa9.24□□□□□ -0.93
LIG1-209ENST00000596104 STXBP1P61764 594 aaKnown RBP9.24□□□□□ -0.93
LIG1-209ENST00000596104 PDAP1Q13442 181 aaKnown RBP9.24□□□□□ -0.93
LIG1-209ENST00000596104 RBBP5Q15291 538 aaKnown RBP9.24□□□□□ -0.93
LIG1-209ENST00000596104 ELAVL1Q15717 326 aaKnown RBP9.24□□□□□ -0.93
LIG1-209ENST00000596104 CYP1B1Q16678 543 aa9.24□□□□□ -0.93
LIG1-209ENST00000596104 HYAL4Q2M3T9 481 aa9.24□□□□□ -0.93
LIG1-209ENST00000596104 NDUFAF5Q5TEU4 345 aa9.24□□□□□ -0.93
LIG1-209ENST00000596104 ZNF585AQ6P3V2 769 aa9.24□□□□□ -0.93
LIG1-209ENST00000596104 GK5Q6ZS86 529 aa9.24□□□□□ -0.93
LIG1-209ENST00000596104 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.24□□□□□ -0.93
LIG1-209ENST00000596104 MMP21Q8N119 569 aa9.24□□□□□ -0.93
LIG1-209ENST00000596104 FAM109AQ8N4B1 249 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms