RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 FJX1Q86VR8 437 aa21.97■■□□□ 1.11
LSM4-204ENST00000594828 SERINC2Q96SA4 455 aa21.97■■□□□ 1.11
LSM4-204ENST00000594828 HES7Q9BYE0 225 aa21.97■■□□□ 1.11
LSM4-204ENST00000594828 PRTFDC1Q9NRG1 225 aa21.97■■□□□ 1.11
LSM4-204ENST00000594828 IGSF5Q9NSI5 407 aa21.97■■□□□ 1.11
LSM4-204ENST00000594828 LRFN1Q9P244 771 aa21.97■■□□□ 1.11
LSM4-204ENST00000594828 ACOT9Q9Y305 439 aa21.97■■□□□ 1.11
LSM4-204ENST00000594828 ASB1Q9Y576 335 aa21.97■■□□□ 1.11
LSM4-204ENST00000594828 ZGRF1Q86YA3 2104 aa21.97■■□□□ 1.11
LSM4-204ENST00000594828 SUPT3HB4E1H0 165 aa21.96■■□□□ 1.11
LSM4-204ENST00000594828 SUPT3HO75486 399 aa21.96■■□□□ 1.11
LSM4-204ENST00000594828 EPORP19235 508 aa21.96■■□□□ 1.11
LSM4-204ENST00000594828 MTTPP55157 894 aa21.96■■□□□ 1.11
LSM4-204ENST00000594828 HSD17B7P56937 341 aa21.96■■□□□ 1.11
LSM4-204ENST00000594828 SLC13A2Q13183 592 aa21.96■■□□□ 1.11
LSM4-204ENST00000594828 C1QL3Q5VWW1 255 aa21.96■■□□□ 1.11
LSM4-204ENST00000594828 SCUBE1Q8IWY4 988 aa21.96■■□□□ 1.11
LSM4-204ENST00000594828 TMEM178AQ8NBL3 297 aa21.96■■□□□ 1.11
LSM4-204ENST00000594828 ADAMTS18Q8TE60 1221 aa21.96■■□□□ 1.11
LSM4-204ENST00000594828 NXNL1Q96CM4 212 aa21.96■■□□□ 1.11
LSM4-204ENST00000594828 MRRFQ96E11 262 aaKnown RBP21.96■■□□□ 1.11
LSM4-204ENST00000594828 SCMH1Q96GD3 660 aa21.96■■□□□ 1.11
LSM4-204ENST00000594828 F2RL3Q96RI0 385 aa21.96■■□□□ 1.11
LSM4-204ENST00000594828 ATOH8Q96SQ7 321 aa21.96■■□□□ 1.11
LSM4-204ENST00000594828 DEFB126Q9BYW3 111 aa21.96■■□□□ 1.11
LSM4-204ENST00000594828 COPS7BQ9H9Q2 264 aaPredicted RBP21.96■■□□□ 1.11
LSM4-204ENST00000594828 PRM3Q9NNZ6 103 aa21.96■■□□□ 1.11
LSM4-204ENST00000594828 PNO1Q9NRX1 252 aaKnown RBP21.96■■□□□ 1.11
LSM4-204ENST00000594828 ZDHHC18Q9NUE0 388 aa21.96■■□□□ 1.11
LSM4-204ENST00000594828 MRPS33Q9Y291 106 aaKnown RBP21.96■■□□□ 1.11
LSM4-204ENST00000594828 MAST4O15021 2626 aa21.95■■□□□ 1.11
LSM4-204ENST00000594828 SVILO95425 2214 aa21.95■■□□□ 1.1
LSM4-204ENST00000594828 UBXN8O00124 270 aa21.95■■□□□ 1.1
LSM4-204ENST00000594828 KERAO60938 352 aa21.95■■□□□ 1.1
LSM4-204ENST00000594828 NEURL1O76050 574 aa21.95■■□□□ 1.1
LSM4-204ENST00000594828 URI1O94763 535 aaPredicted RBP21.95■■□□□ 1.1
LSM4-204ENST00000594828 MYO1DO94832 1006 aa21.95■■□□□ 1.1
LSM4-204ENST00000594828 SP1P08047 785 aa21.95■■□□□ 1.1
LSM4-204ENST00000594828 TPP2P29144 1249 aaPredicted RBP21.95■■□□□ 1.1
LSM4-204ENST00000594828 CASP2P42575 452 aa21.95■■□□□ 1.1
LSM4-204ENST00000594828 MLF1P58340 268 aa21.95■■□□□ 1.1
LSM4-204ENST00000594828 ZNF468Q5VIY5 522 aaPredicted RBP21.95■■□□□ 1.1
LSM4-204ENST00000594828 SLC25A25Q6KCM7 469 aa21.95■■□□□ 1.1
LSM4-204ENST00000594828 ZNF595Q8IYB9 648 aa21.95■■□□□ 1.1
LSM4-204ENST00000594828 FAM47BQ8NA70 645 aa21.95■■□□□ 1.1
LSM4-204ENST00000594828 B3GNT7Q8NFL0 401 aa21.95■■□□□ 1.1
LSM4-204ENST00000594828 UBE2E3Q969T4 207 aa21.95■■□□□ 1.1
LSM4-204ENST00000594828 RELTQ969Z4 430 aa21.95■■□□□ 1.1
LSM4-204ENST00000594828 PRDM7Q9NQW5 492 aa21.95■■□□□ 1.1
LSM4-204ENST00000594828 OPTCQ9UBM4 332 aa21.95■■□□□ 1.1
LSM4-204ENST00000594828 NAV2Q8IVL1 2488 aa21.94■■□□□ 1.1
LSM4-204ENST00000594828 A0A087X1B8 175 aa21.94■■□□□ 1.1
LSM4-204ENST00000594828 CERS1P27544 350 aa21.94■■□□□ 1.1
LSM4-204ENST00000594828 MSH2P43246 934 aa21.94■■□□□ 1.1
LSM4-204ENST00000594828 CYB561P49447 251 aa21.94■■□□□ 1.1
LSM4-204ENST00000594828 CLCN2P51788 898 aa21.94■■□□□ 1.1
LSM4-204ENST00000594828 HNRNPFP52597 415 aaKnown RBP21.94■■□□□ 1.1
LSM4-204ENST00000594828 LIM2P55344 173 aa21.94■■□□□ 1.1
LSM4-204ENST00000594828 E2F2Q14209 437 aa21.94■■□□□ 1.1
LSM4-204ENST00000594828 RCN2Q14257 317 aa21.94■■□□□ 1.1
LSM4-204ENST00000594828 TERF2Q15554 542 aa21.94■■□□□ 1.1
LSM4-204ENST00000594828 ZRSR2Q15696 482 aaKnown RBP21.94■■□□□ 1.1
LSM4-204ENST00000594828 MROH9Q5TGP6 573 aa21.94■■□□□ 1.1
LSM4-204ENST00000594828 GALNTL5Q7Z4T8 443 aa21.94■■□□□ 1.1
LSM4-204ENST00000594828 CCDC91Q7Z6B0 441 aa21.94■■□□□ 1.1
LSM4-204ENST00000594828 FAM98AQ8NCA5 519 aaKnown RBP21.94■■□□□ 1.1
LSM4-204ENST00000594828 TMEM52Q8NDY8 209 aa21.94■■□□□ 1.1
LSM4-204ENST00000594828 SRFBP1Q8NEF9 429 aaKnown RBP21.94■■□□□ 1.1
LSM4-204ENST00000594828 C16orf45Q96MC5 204 aaPredicted RBP21.94■■□□□ 1.1
LSM4-204ENST00000594828 DAPP1Q9UN19 280 aa21.94■■□□□ 1.1
LSM4-204ENST00000594828 TRGV8A0A0C4DH27 118 aa21.93■■□□□ 1.1
LSM4-204ENST00000594828 K7EPI3 171 aa21.93■■□□□ 1.1
LSM4-204ENST00000594828 CYR61O00622 381 aa21.93■■□□□ 1.1
LSM4-204ENST00000594828 FCHO1O14526 889 aa21.93■■□□□ 1.1
LSM4-204ENST00000594828 ZG16O60844 167 aa21.93■■□□□ 1.1
LSM4-204ENST00000594828 C2P06681 752 aa21.93■■□□□ 1.1
LSM4-204ENST00000594828 PHBP35232 272 aa21.93■■□□□ 1.1
LSM4-204ENST00000594828 RBPJQ06330 500 aa21.93■■□□□ 1.1
LSM4-204ENST00000594828 BMPR2Q13873 1038 aa21.93■■□□□ 1.1
LSM4-204ENST00000594828 UAP1Q16222 522 aaPredicted RBP21.93■■□□□ 1.1
LSM4-204ENST00000594828 MAPKAPK3Q16644 382 aa21.93■■□□□ 1.1
LSM4-204ENST00000594828 FAM83EQ2M2I3 478 aa21.93■■□□□ 1.1
LSM4-204ENST00000594828 ZNF800Q2TB10 664 aaPredicted RBP eCLIP21.93■■□□□ 1.12e-9■■■□□ 15.1
LSM4-204ENST00000594828 MED27Q6P2C8 311 aa21.93■■□□□ 1.1
LSM4-204ENST00000594828 APCDD1LQ8NCL9 501 aa21.93■■□□□ 1.1
LSM4-204ENST00000594828 UBTD2Q8WUN7 234 aa21.93■■□□□ 1.1
LSM4-204ENST00000594828 KCTD4Q8WVF5 259 aa21.93■■□□□ 1.1
LSM4-204ENST00000594828 KCNC2Q96PR1 638 aa21.93■■□□□ 1.1
LSM4-204ENST00000594828 ROGDIQ9GZN7 287 aa21.93■■□□□ 1.1
LSM4-204ENST00000594828 CLDN16Q9Y5I7 305 aa21.93■■□□□ 1.1
LSM4-204ENST00000594828 TRBV11-1A0A0K0K1C0 115 aa21.92■■□□□ 1.1
LSM4-204ENST00000594828 ASPDHA6ND91 283 aa21.92■■□□□ 1.1
LSM4-204ENST00000594828 SYCE1LA8MT33 242 aa21.92■■□□□ 1.1
LSM4-204ENST00000594828 TGFBR3LH3BV60 316 aa21.92■■□□□ 1.1
LSM4-204ENST00000594828 SLC25A12O75746 678 aa21.92■■□□□ 1.1
LSM4-204ENST00000594828 WISP2O76076 250 aa21.92■■□□□ 1.1
LSM4-204ENST00000594828 MLYCDO95822 493 aa21.92■■□□□ 1.1
LSM4-204ENST00000594828 PCNAP12004 261 aa21.92■■□□□ 1.1
LSM4-204ENST00000594828 MTHFD2P13995 350 aa21.92■■□□□ 1.1
LSM4-204ENST00000594828 EPB42P16452 691 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms